Strain Fitness in Escherichia coli BW25113 around b3609

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
3,781,687	-				-0.6
3,781,716	-				-0.1
3,781,744	-	secB	b3609	0.13	-3.6
3,781,790	-	secB	b3609	0.23	-2.0
3,781,862	-	secB	b3609	0.38	-4.2
3,781,890	-	secB	b3609	0.44	-4.8
3,781,930	-	secB	b3609	0.53	-3.3
3,781,930	-	secB	b3609	0.53	-2.8
3,781,967	-	secB	b3609	0.60	-3.5
3,781,980	-	secB	b3609	0.63	-1.4
3,781,990	-	secB	b3609	0.65	-3.9
3,781,990	-	secB	b3609	0.65	-2.2
3,782,150	-				-5.2
3,782,150	-				-2.3
3,782,159	-				+0.3
3,782,185	-				-0.3
3,782,192	+				-0.7
3,782,195	-				-0.0
3,782,200	-				-0.4
3,782,200	-				-1.4
3,782,200	-				-0.4
3,782,220	-				+0.0
3,782,241	-	grxC	b3610	0.11	+0.3
3,782,260	-	grxC	b3610	0.18	+0.0
3,782,264	-	grxC	b3610	0.20	-0.8
3,782,264	-	grxC	b3610	0.20	-0.6
3,782,275	+	grxC	b3610	0.24	-2.2
3,782,277	+	grxC	b3610	0.25	-1.6
3,782,277	+	grxC	b3610	0.25	-0.3
3,782,280	+	grxC	b3610	0.26	-0.2
3,782,280	+	grxC	b3610	0.26	-0.6
3,782,283	-	grxC	b3610	0.27	-0.5
3,782,308	+	grxC	b3610	0.37	+1.1
3,782,308	+	grxC	b3610	0.37	-0.5
3,782,314	-	grxC	b3610	0.40	-1.4
3,782,337	+	grxC	b3610	0.49	+0.6
3,782,366	-	grxC	b3610	0.60	+0.4
3,782,366	-	grxC	b3610	0.60	+0.4
3,782,381	+	grxC	b3610	0.66	+0.3
3,782,381	+	grxC	b3610	0.66	+0.2
3,782,381	-	grxC	b3610	0.66	-0.2
3,782,395	+	grxC	b3610	0.72	-2.5
3,782,416	-	grxC	b3610	0.80	+0.0
3,782,433	+	grxC	b3610	0.87	+0.1
3,782,527	+				+0.6
3,782,527	+				-0.4
3,782,529	+				-0.6
3,782,535	-				+0.0
3,782,545	-				-0.6
3,782,561	+				-1.2
3,782,578	+				-0.1
3,782,589	-				+0.5
3,782,646	+				-0.6
3,782,656	+	yibN	b3611	0.11	-0.9
3,782,708	-	yibN	b3611	0.23	+0.5
3,782,709	-	yibN	b3611	0.24	-0.3
3,782,726	+	yibN	b3611	0.28	-1.7
3,782,726	+	yibN	b3611	0.28	+0.2
3,782,726	+	yibN	b3611	0.28	+0.2
3,782,729	-	yibN	b3611	0.28	-0.4
3,782,729	-	yibN	b3611	0.28	-1.6
3,782,729	-	yibN	b3611	0.28	-1.0
3,782,766	-	yibN	b3611	0.37	-2.1
3,782,769	+	yibN	b3611	0.38	+1.1
3,782,769	+	yibN	b3611	0.38	-0.9
3,782,787	-	yibN	b3611	0.42	+0.1
3,782,854	-	yibN	b3611	0.57	-0.7
3,782,858	+	yibN	b3611	0.58	-0.9
3,782,892	+	yibN	b3611	0.66	-0.7
3,782,892	+	yibN	b3611	0.66	-0.9
3,782,999	+				-1.4
3,783,007	-				+0.0
3,783,092	-				+0.4
3,783,092	-				-0.1
3,783,107	+				-1.5
3,783,111	-				-0.9
3,783,111	-				+0.0