Strain Fitness in Escherichia coli BW25113 around b0634
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 663,427 | - | -0.5 | |||
| 663,465 | - | rlpA | b0633 | 0.13 | +0.0 |
| 663,465 | - | rlpA | b0633 | 0.13 | -0.7 |
| 663,475 | - | rlpA | b0633 | 0.14 | -0.9 |
| 663,532 | - | rlpA | b0633 | 0.19 | -0.5 |
| 663,581 | + | rlpA | b0633 | 0.24 | -1.0 |
| 663,581 | + | rlpA | b0633 | 0.24 | -0.6 |
| 663,620 | + | rlpA | b0633 | 0.27 | -1.3 |
| 663,697 | - | rlpA | b0633 | 0.34 | -0.7 |
| 663,770 | - | rlpA | b0633 | 0.41 | -0.6 |
| 663,775 | - | rlpA | b0633 | 0.41 | -0.8 |
| 663,775 | - | rlpA | b0633 | 0.41 | -0.8 |
| 663,844 | - | rlpA | b0633 | 0.48 | -0.5 |
| 663,849 | - | rlpA | b0633 | 0.48 | -0.8 |
| 663,849 | - | rlpA | b0633 | 0.48 | -0.8 |
| 663,860 | + | rlpA | b0633 | 0.49 | -1.4 |
| 663,865 | + | rlpA | b0633 | 0.50 | -1.4 |
| 663,865 | + | rlpA | b0633 | 0.50 | -1.1 |
| 663,867 | + | rlpA | b0633 | 0.50 | -1.1 |
| 663,873 | - | rlpA | b0633 | 0.50 | -0.9 |
| 663,894 | + | rlpA | b0633 | 0.52 | -0.9 |
| 663,900 | - | rlpA | b0633 | 0.53 | -0.7 |
| 663,900 | - | rlpA | b0633 | 0.53 | -1.1 |
| 663,941 | - | rlpA | b0633 | 0.57 | -0.9 |
| 664,174 | + | rlpA | b0633 | 0.78 | -0.3 |
| 664,260 | - | rlpA | b0633 | 0.86 | -0.5 |
| 664,260 | - | rlpA | b0633 | 0.86 | -1.6 |
| 664,293 | + | rlpA | b0633 | 0.89 | -1.1 |
| 664,293 | + | rlpA | b0633 | 0.89 | -2.0 |
| 664,303 | + | rlpA | b0633 | 0.90 | -1.9 |
| 664,311 | - | -0.6 | |||
| 664,323 | + | -1.2 | |||
| 664,348 | + | -0.6 | |||
| 664,367 | - | -1.2 | |||
| 664,385 | + | -0.4 | |||
| 664,385 | + | -0.7 | |||
| 664,413 | + | -0.2 | |||
| 665,612 | - | -0.3 |
Or see this region's nucleotide sequence