Strain Fitness in Escherichia coli BW25113 around b4698

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,619,872	-	ydeE	b1534	0.43	-0.2
1,619,929	+	ydeE	b1534	0.48	+0.6
1,619,929	+	ydeE	b1534	0.48	-0.1
1,620,034	-	ydeE	b1534	0.57	-1.1
1,620,095	+	ydeE	b1534	0.62	-0.2
1,620,183	+	ydeE	b1534	0.70	+0.1
1,620,302	-	ydeE	b1534	0.80	+0.5
1,620,316	+	ydeE	b1534	0.81	+0.3
1,620,372	+	ydeE	b1534	0.86	+0.3
1,620,372	+	ydeE	b1534	0.86	-0.3
1,620,421	+	ydeE	b1534	0.90	-0.2
1,620,424	-	ydeE	b1534	0.90	+0.4
1,620,424	-	ydeE	b1534	0.90	-0.1
1,620,435	+				-0.1
1,620,435	+				+0.4
1,620,503	+				-3.2
1,620,522	+				-2.2
1,620,581	+				-3.2
1,620,638	+				-1.6
1,620,638	+				-2.4
1,620,638	+				-2.8
1,620,651	+				-2.7
1,620,772	-				+1.5
1,620,779	+				-1.8
1,620,784	+				-0.5
1,620,784	+				-1.7
1,620,800	+				-3.2
1,620,800	+				-1.2
1,620,807	+				-3.8
1,620,812	+				-0.4
1,620,812	+				-1.5
1,620,874	-	mgrR	b4698	0.34	-3.2
1,620,874	-	mgrR	b4698	0.34	-1.7
1,620,879	-	mgrR	b4698	0.39	-2.5
1,620,926	-	mgrR	b4698	0.87	-0.2
1,620,946	-				-0.1
1,620,978	-				-1.4
1,620,990	-				-0.3
1,621,058	-				+0.9
1,621,058	-				+0.5
1,621,084	-	ydeH	b1535	0.11	-0.4
1,621,084	-	ydeH	b1535	0.11	+0.5
1,621,089	-	ydeH	b1535	0.12	+0.0
1,621,094	-	ydeH	b1535	0.12	-1.3
1,621,094	-	ydeH	b1535	0.12	+0.6
1,621,103	+	ydeH	b1535	0.13	+1.5
1,621,121	-	ydeH	b1535	0.15	+0.1
1,621,207	-	ydeH	b1535	0.25	+0.8
1,621,207	-	ydeH	b1535	0.25	-1.3
1,621,215	-	ydeH	b1535	0.26	+0.9
1,621,304	-	ydeH	b1535	0.36	-0.2
1,621,307	+	ydeH	b1535	0.36	-0.1
1,621,315	-	ydeH	b1535	0.37	-1.1
1,621,317	+	ydeH	b1535	0.37	+1.5
1,621,320	+	ydeH	b1535	0.38	+1.5
1,621,323	-	ydeH	b1535	0.38	-0.5
1,621,325	-	ydeH	b1535	0.38	+0.2
1,621,416	-	ydeH	b1535	0.48	+0.7
1,621,439	-	ydeH	b1535	0.51	+0.4
1,621,459	-	ydeH	b1535	0.53	-0.2
1,621,685	-	ydeH	b1535	0.79	+0.7
1,621,685	-	ydeH	b1535	0.79	+0.6
1,621,691	-	ydeH	b1535	0.79	+1.2
1,621,714	+	ydeH	b1535	0.82	-1.3
1,621,722	-	ydeH	b1535	0.83	-0.7
1,621,724	+	ydeH	b1535	0.83	+0.0
1,621,724	+	ydeH	b1535	0.83	+1.5
1,621,724	+	ydeH	b1535	0.83	+1.5
1,621,724	+	ydeH	b1535	0.83	-0.1
1,621,726	+	ydeH	b1535	0.83	-0.0
1,621,732	-	ydeH	b1535	0.84	+2.5
1,621,732	-	ydeH	b1535	0.84	+1.5
1,621,761	-	ydeH	b1535	0.87	+0.0
1,621,761	-	ydeH	b1535	0.87	-0.4
1,621,789	+				+1.5
1,621,799	+				+1.5
1,621,799	+				-0.1
1,621,799	+				-0.1
1,621,799	+				+1.5
1,621,803	+				+1.5
1,621,811	-				+1.5
1,621,813	-				+1.5
1,621,917	-				+1.5