Strain Fitness in Escherichia coli BW25113 around b3797

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
3,979,553	-	yifK	b3795	0.46	+1.0
3,979,599	+	yifK	b3795	0.50	+1.5
3,979,696	+	yifK	b3795	0.57	-1.8
3,979,696	+	yifK	b3795	0.57	+0.8
3,979,717	-	yifK	b3795	0.58	+0.7
3,979,780	+	yifK	b3795	0.63	+0.4
3,979,780	+	yifK	b3795	0.63	-2.7
3,979,780	+	yifK	b3795	0.63	+1.9
3,979,795	+	yifK	b3795	0.64	+1.4
3,979,801	+	yifK	b3795	0.64	+0.4
3,979,806	+	yifK	b3795	0.65	+0.8
3,979,821	-	yifK	b3795	0.66	+0.8
3,979,823	+	yifK	b3795	0.66	+1.6
3,979,838	+	yifK	b3795	0.67	-3.5
3,979,838	+	yifK	b3795	0.67	+1.5
3,979,846	-	yifK	b3795	0.68	-3.3
3,979,846	-	yifK	b3795	0.68	-4.7
3,979,846	-	yifK	b3795	0.68	-3.4
3,979,905	+	yifK	b3795	0.72	+1.0
3,979,905	+	yifK	b3795	0.72	+0.0
3,979,928	+	yifK	b3795	0.73	+1.9
3,979,928	+	yifK	b3795	0.73	+0.4
3,979,944	-	yifK	b3795	0.75	+0.4
3,979,944	-	yifK	b3795	0.75	-3.8
3,979,980	+	yifK	b3795	0.77	-2.8
3,980,003	+	yifK	b3795	0.79	+0.2
3,980,017	-	yifK	b3795	0.80	-3.2
3,980,017	-	yifK	b3795	0.80	-2.4
3,980,022	-	yifK	b3795	0.80	+2.4
3,980,022	-	yifK	b3795	0.80	+1.1
3,980,033	+	yifK	b3795	0.81	-2.8
3,980,041	-	yifK	b3795	0.82	+1.0
3,980,051	-	yifK	b3795	0.82	-3.4
3,980,899	-				-0.5
3,980,909	+				-0.4
3,980,922	+				+1.7
3,980,922	+				-3.6
3,980,978	+				+1.6
3,980,978	+				-0.2
3,980,979	-				+0.1
3,980,979	-				+1.2
3,981,033	+				-5.4
3,981,126	+	aslB	b3800	0.12	-3.0
3,981,190	-	aslB	b3800	0.17	-1.1
3,981,204	+	aslB	b3800	0.18	+1.2
3,981,239	+	aslB	b3800	0.21	+0.1
3,981,318	-	aslB	b3800	0.27	+0.7
3,981,365	+	aslB	b3800	0.31	-3.7
3,981,365	+	aslB	b3800	0.31	+1.2
3,981,410	+	aslB	b3800	0.35	+1.5
3,981,414	-	aslB	b3800	0.35	-2.2
3,981,427	+	aslB	b3800	0.36	-3.5
3,981,427	+	aslB	b3800	0.36	+1.6
3,981,485	-	aslB	b3800	0.41	+0.5
3,981,490	+	aslB	b3800	0.41	+2.9
3,981,513	-	aslB	b3800	0.43	+1.2