Strain Fitness in Escherichia coli BW25113 around b4468

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
3,122,531	+	glcF	b4467	0.22	+1.2
3,122,556	+	glcF	b4467	0.24	-4.6
3,122,567	+	glcF	b4467	0.25	-0.2
3,122,704	+	glcF	b4467	0.36	-2.0
3,122,711	-	glcF	b4467	0.37	+1.0
3,122,861	+	glcF	b4467	0.49	+0.9
3,122,886	-	glcF	b4467	0.51	-2.2
3,122,908	-	glcF	b4467	0.53	-3.8
3,122,908	-	glcF	b4467	0.53	-0.1
3,122,940	+	glcF	b4467	0.56	-1.0
3,122,940	+	glcF	b4467	0.56	+1.0
3,122,940	+	glcF	b4467	0.56	+0.2
3,122,981	+	glcF	b4467	0.59	+0.2
3,122,981	+	glcF	b4467	0.59	+1.1
3,122,981	+	glcF	b4467	0.59	+0.9
3,123,039	-	glcF	b4467	0.64	-3.6
3,123,217	+	glcF	b4467	0.78	-2.4
3,123,219	+	glcF	b4467	0.79	+1.4
3,123,329	-	glcF	b4467	0.88	+0.9
3,123,329	-	glcF	b4467	0.88	-0.9
3,123,347	-	glcF	b4467	0.89	-1.9
3,123,517	+				+1.2
3,123,517	+				-1.7
3,123,555	-				-4.7
3,123,555	-				+1.4
3,123,743	+	glcE	b4468	0.24	+1.4
3,123,761	-	glcE	b4468	0.26	-2.7
3,123,800	+	glcE	b4468	0.29	-3.3
3,123,800	+	glcE	b4468	0.29	+2.5
3,123,930	-	glcE	b4468	0.42	-3.2
3,123,930	-	glcE	b4468	0.42	-0.4
3,123,945	+	glcE	b4468	0.43	+1.9
3,124,288	-	glcE	b4468	0.76	-1.1
3,124,306	+	glcE	b4468	0.77	+1.4
3,124,558	+				+2.0
3,124,558	+				-2.4
3,124,586	+				-0.4
3,124,621	-				+0.7
3,124,800	+	glcD	b2979	0.17	-0.0
3,124,953	-	glcD	b2979	0.27	+0.9
3,125,135	+	glcD	b2979	0.39	-0.2
3,125,135	+	glcD	b2979	0.39	-4.1
3,125,139	+	glcD	b2979	0.40	-2.3
3,125,146	+	glcD	b2979	0.40	-4.2
3,125,243	-	glcD	b2979	0.47	-1.0
3,125,243	-	glcD	b2979	0.47	-1.4
3,125,263	+	glcD	b2979	0.48	-1.0
3,125,263	+	glcD	b2979	0.48	-2.6
3,125,297	-	glcD	b2979	0.50	-0.6
3,125,297	-	glcD	b2979	0.50	-3.1
3,125,518	-	glcD	b2979	0.65	-2.1
3,125,518	-	glcD	b2979	0.65	-3.1