Strain Fitness in Escherichia coli BW25113 around b4093

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
4,312,193	+				-2.8
4,312,202	+				+1.6
4,312,227	-				-3.7
4,312,256	+				-4.0
4,312,263	-				+0.1
4,312,338	-				-2.6
4,312,375	+				-2.2
4,312,418	-				+0.9
4,312,418	-				-3.0
4,312,567	+	phnP	b4092	0.26	-0.6
4,312,658	-	phnP	b4092	0.38	-3.4
4,312,658	-	phnP	b4092	0.38	+0.0
4,312,663	-	phnP	b4092	0.39	+1.3
4,312,663	-	phnP	b4092	0.39	-2.7
4,312,668	-	phnP	b4092	0.40	+1.8
4,312,668	-	phnP	b4092	0.40	+0.6
4,312,700	+	phnP	b4092	0.44	-0.2
4,312,714	-	phnP	b4092	0.46	+0.4
4,312,720	+	phnP	b4092	0.47	+0.8
4,312,720	+	phnP	b4092	0.47	-0.8
4,312,721	-	phnP	b4092	0.47	-3.7
4,312,728	-	phnP	b4092	0.48	+0.4
4,312,788	-	phnP	b4092	0.55	+0.4
4,312,803	+	phnP	b4092	0.57	-2.0
4,312,808	+	phnP	b4092	0.58	-5.1
4,312,948	-	phnP	b4092	0.77	+0.1
4,312,965	-	phnP	b4092	0.79	+0.9
4,313,024	-	phnP	b4092	0.87	+1.5
4,313,041	+	phnP	b4092	0.89	+2.3
4,313,060	+				+0.6
4,313,094	-				-4.0
4,313,115	-				+3.5
4,313,115	-				-4.1
4,313,127	+				-2.6
4,313,185	-	phnO	b4093	0.13	+0.3
4,313,195	-	phnO	b4093	0.16	+1.4
4,313,274	+	phnO	b4093	0.34	+2.2
4,313,433	+	phnO	b4093	0.70	-0.1
4,313,502	-	phnO	b4093	0.86	+1.4
4,313,502	-	phnO	b4093	0.86	+1.7
4,313,529	-				+0.3
4,313,529	-				-0.1
4,313,565	-				+0.6
4,313,634	+	phnN	b4094	0.15	-2.7
4,313,662	-	phnN	b4094	0.20	-0.1
4,313,821	+	phnN	b4094	0.49	-0.7
4,313,821	+	phnN	b4094	0.49	-2.8
4,313,881	-	phnN	b4094	0.60	-2.8
4,313,881	-	phnN	b4094	0.60	-1.0
4,313,956	-	phnN	b4094	0.73	+1.4
4,314,001	-	phnN	b4094	0.81	+0.2
4,314,043	+	phnN	b4094	0.89	+2.0
4,314,122	-				-0.0
4,314,213	+				-0.3
4,314,213	+				-3.1
4,314,357	-	phnM	b4095	0.22	+0.3
4,314,363	+	phnM	b4095	0.23	-2.8
4,314,396	+	phnM	b4095	0.26	+1.6
4,314,445	+	phnM	b4095	0.30	-3.2
4,314,445	+	phnM	b4095	0.30	+2.2