Strain Fitness in Escherichia coli BW25113 around b4015

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
4,214,182	+	aceB	b4014	0.43	+0.7
4,214,190	-	aceB	b4014	0.43	+1.6
4,214,244	+	aceB	b4014	0.46	-3.0
4,214,244	+	aceB	b4014	0.46	-2.9
4,214,314	-	aceB	b4014	0.51	-3.0
4,214,527	+	aceB	b4014	0.64	-2.8
4,214,568	+	aceB	b4014	0.67	-1.8
4,214,602	+	aceB	b4014	0.69	-1.0
4,214,621	+	aceB	b4014	0.70	+0.0
4,214,731	+	aceB	b4014	0.77	+1.4
4,214,731	+	aceB	b4014	0.77	-0.8
4,214,751	-	aceB	b4014	0.78	-0.2
4,214,778	+	aceB	b4014	0.80	+0.9
4,215,008	+				+1.0
4,215,037	+				-2.4
4,215,077	+				+3.0
4,215,206	+				-0.1
4,215,214	-				+2.4
4,215,214	-				-2.8
4,215,214	-				-0.4
4,215,214	-				-4.3
4,215,214	-				-1.0
4,215,267	+	aceA	b4015	0.10	+2.2
4,215,454	-	aceA	b4015	0.25	-1.8
4,215,566	+	aceA	b4015	0.33	+2.2
4,215,702	+	aceA	b4015	0.44	+0.8
4,215,736	-	aceA	b4015	0.46	+1.4
4,215,759	+	aceA	b4015	0.48	+3.0
4,215,813	+	aceA	b4015	0.52	-0.8
4,215,878	-	aceA	b4015	0.57	+0.6
4,215,878	-	aceA	b4015	0.57	-3.7
4,215,941	-	aceA	b4015	0.62	+0.2
4,215,965	+	aceA	b4015	0.64	-0.4
4,215,989	-	aceA	b4015	0.66	+0.3
4,215,989	-	aceA	b4015	0.66	+1.9
4,216,035	+	aceA	b4015	0.69	-1.3
4,216,074	+	aceA	b4015	0.72	-0.5
4,216,074	+	aceA	b4015	0.72	+3.7
4,216,082	-	aceA	b4015	0.73	+0.0
4,216,194	+	aceA	b4015	0.81	-4.4
4,216,291	-	aceA	b4015	0.89	-3.0
4,216,350	-				-0.1
4,216,350	-				+1.4
4,216,414	-				-3.1
4,216,465	-				-0.1
4,216,506	-				-3.8
4,216,506	-				+1.5
4,216,564	+				-1.6
4,216,564	+				+0.6
4,216,600	+				-2.4
4,216,701	+				+0.3
4,216,727	-				+1.3
4,216,774	+				+1.1
4,216,790	-				+1.6
4,216,858	-	aceK	b4016	0.14	-3.6
4,216,875	+	aceK	b4016	0.15	+2.0
4,216,909	-	aceK	b4016	0.17	+0.9
4,216,909	-	aceK	b4016	0.17	+1.6
4,217,001	-	aceK	b4016	0.22	+0.3
4,217,011	+	aceK	b4016	0.23	-1.4
4,217,030	-	aceK	b4016	0.24	+2.5
4,217,067	-	aceK	b4016	0.26	+0.5
4,217,067	-	aceK	b4016	0.26	+0.2
4,217,182	-	aceK	b4016	0.32	+1.7
4,217,417	-	aceK	b4016	0.46	+0.5
4,217,417	-	aceK	b4016	0.46	+0.3