Strain Fitness in Escherichia coli BW25113 around b3294

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
3,436,642	-	yhdL	b4550	0.86	+2.4
3,436,644	+	yhdL	b4550	0.87	+1.6
3,436,659	+				-0.5
3,436,748	+				-2.4
3,436,757	+				-1.5
3,436,767	+				-4.2
3,436,796	-	zntR	b3292	0.16	+0.5
3,436,803	+	zntR	b3292	0.18	-2.3
3,436,811	-	zntR	b3292	0.20	+0.1
3,436,811	-	zntR	b3292	0.20	-0.5
3,436,840	+	zntR	b3292	0.27	-1.5
3,436,840	+	zntR	b3292	0.27	+2.1
3,436,848	+	zntR	b3292	0.28	+1.2
3,436,889	+	zntR	b3292	0.38	-1.9
3,436,889	+	zntR	b3292	0.38	-2.7
3,436,927	+	zntR	b3292	0.47	+0.1
3,436,935	-	zntR	b3292	0.49	-2.8
3,436,935	-	zntR	b3292	0.49	-2.7
3,436,987	-	zntR	b3292	0.61	+1.1
3,436,994	-	zntR	b3292	0.63	-1.6
3,436,994	-	zntR	b3292	0.63	-2.1
3,437,070	-	zntR	b3292	0.81	-3.7
3,437,111	-				-2.9
3,437,111	-				-3.7
3,437,158	-				-3.5
3,437,158	-				-4.0
3,437,166	-				-0.5
3,437,223	+	yhdN	b3293	0.16	-3.8
3,437,226	+	yhdN	b3293	0.17	-0.3
3,437,234	-	yhdN	b3293	0.19	-1.9
3,437,276	+	yhdN	b3293	0.31	-0.1
3,437,338	+	yhdN	b3293	0.47	+1.8
3,437,425	-	yhdN	b3293	0.71	-0.0
3,437,425	-	yhdN	b3293	0.71	+0.6
3,437,492	+	yhdN	b3293	0.89	+0.6
3,437,500	-				+2.0
3,437,500	-				+1.5
3,437,502	-				-0.7
3,437,504	+				+1.7
3,437,529	+				-4.7
3,437,534	-				+1.3
3,437,669	-				-3.4