Strain Fitness in Escherichia coli BW25113 around b2600

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
2,735,994	+	pheA	b2599	0.20	-1.4
2,736,002	-	pheA	b2599	0.20	-0.9
2,736,002	-	pheA	b2599	0.20	+1.1
2,736,085	+	pheA	b2599	0.27	+2.4
2,736,085	+	pheA	b2599	0.27	-0.2
2,736,139	-	pheA	b2599	0.32	+0.6
2,736,272	+	pheA	b2599	0.43	+1.2
2,736,382	+	pheA	b2599	0.53	+3.3
2,736,382	+	pheA	b2599	0.53	+0.1
2,736,390	-	pheA	b2599	0.54	+0.3
2,736,390	-	pheA	b2599	0.54	-3.5
2,736,390	-	pheA	b2599	0.54	-3.0
2,736,395	-	pheA	b2599	0.54	-0.2
2,736,409	-	pheA	b2599	0.55	+2.0
2,736,409	-	pheA	b2599	0.55	+0.4
2,736,411	-	pheA	b2599	0.55	+0.9
2,736,411	-	pheA	b2599	0.55	-1.5
2,736,534	-	pheA	b2599	0.66	+1.5
2,736,549	-	pheA	b2599	0.67	-0.2
2,736,567	-	pheA	b2599	0.69	-1.3
2,736,633	+	pheA	b2599	0.75	-3.9
2,736,634	-	pheA	b2599	0.75	+0.8
2,736,710	+	pheA	b2599	0.81	-4.3
2,736,710	+	pheA	b2599	0.81	-3.0
2,736,746	+	pheA	b2599	0.84	+1.0
2,736,905	-				+1.2
2,736,942	-				+0.0
2,736,952	-				-0.3
2,737,058	-				-0.8
2,737,175	-	tyrA	b2600	0.18	+0.8
2,737,294	+	tyrA	b2600	0.29	-2.7
2,737,399	-	tyrA	b2600	0.38	-3.6
2,737,589	-	tyrA	b2600	0.55	+0.2
2,737,698	-	tyrA	b2600	0.65	+2.2
2,737,698	-	tyrA	b2600	0.65	-3.5
2,737,712	-	tyrA	b2600	0.66	+0.6
2,737,753	-	tyrA	b2600	0.70	+0.7
2,737,753	-	tyrA	b2600	0.70	-0.0
2,737,877	-	tyrA	b2600	0.81	-0.3
2,737,877	-	tyrA	b2600	0.81	-0.2
2,737,890	-	tyrA	b2600	0.82	-0.7
2,737,978	+	tyrA	b2600	0.90	-1.2
2,737,978	+	tyrA	b2600	0.90	+3.3
2,738,079	+				-3.5
2,738,079	+				-4.2
2,738,079	+				+1.1
2,738,099	-				-1.8
2,738,201	-				+0.9
2,738,366	-	aroF	b2601	0.25	+1.6
2,738,378	-	aroF	b2601	0.26	-2.2
2,738,445	+	aroF	b2601	0.32	-2.9
2,738,534	-	aroF	b2601	0.40	-1.1
2,738,534	-	aroF	b2601	0.40	-4.3
2,738,714	+	aroF	b2601	0.57	-0.5
2,738,714	+	aroF	b2601	0.57	-2.8
2,738,768	-	aroF	b2601	0.62	+1.5
2,738,768	-	aroF	b2601	0.62	+2.3
2,738,829	+	aroF	b2601	0.68	+1.6
2,738,829	+	aroF	b2601	0.68	+1.2
2,738,897	+	aroF	b2601	0.74	+1.9
2,738,899	+	aroF	b2601	0.74	-0.4
2,738,905	+	aroF	b2601	0.75	-0.8
2,738,926	+	aroF	b2601	0.77	-0.7
2,738,926	+	aroF	b2601	0.77	-3.5
2,738,945	-	aroF	b2601	0.79	-0.3
2,738,999	-	aroF	b2601	0.84	+2.1
2,738,999	-	aroF	b2601	0.84	-1.7
2,739,001	+	aroF	b2601	0.84	-1.3
2,739,008	-	aroF	b2601	0.85	-1.5
2,739,008	-	aroF	b2601	0.85	-2.2