Strain Fitness in Escherichia coli BW25113 around b2207

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
2,299,817	-	napA	b2206	0.61	+0.9
2,299,859	+	napA	b2206	0.63	-0.9
2,300,072	+	napA	b2206	0.72	-0.6
2,300,072	+	napA	b2206	0.72	+0.7
2,300,114	+	napA	b2206	0.73	+1.4
2,300,239	+	napA	b2206	0.78	+1.0
2,300,240	-	napA	b2206	0.78	-0.3
2,300,245	-	napA	b2206	0.79	+1.8
2,300,338	+	napA	b2206	0.82	-0.5
2,300,365	+	napA	b2206	0.83	+0.7
2,300,365	+	napA	b2206	0.83	+1.8
2,300,421	-	napA	b2206	0.86	-2.1
2,300,421	-	napA	b2206	0.86	+0.5
2,300,605	+				-1.3
2,300,832	+	napD	b2207	0.23	-3.2
2,300,841	+	napD	b2207	0.26	-1.1
2,300,865	-	napD	b2207	0.35	-0.4
2,300,965	+	napD	b2207	0.73	-1.3
2,301,037	+				-3.7
2,301,037	+				-2.5
2,301,060	+				+1.2
2,301,060	+				+1.4
2,301,084	+	napF	b2208	0.12	-2.0
2,301,183	-	napF	b2208	0.32	-1.1
2,301,210	-	napF	b2208	0.37	+0.2
2,301,210	-	napF	b2208	0.37	+1.1
2,301,256	-	napF	b2208	0.47	-0.8
2,301,257	-	napF	b2208	0.47	+1.0
2,301,286	+	napF	b2208	0.53	-0.5
2,301,415	-	napF	b2208	0.79	-1.2
2,301,496	-				+1.6
2,301,620	+				+0.3
2,301,874	+				+1.0