Strain Fitness in Escherichia coli BW25113 around b2187

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
2,281,166	-	yejK	b2186	0.20	-0.4
2,281,166	-	yejK	b2186	0.20	-4.3
2,281,253	+	yejK	b2186	0.29	-2.0
2,281,255	+	yejK	b2186	0.29	+2.5
2,281,263	+	yejK	b2186	0.30	-0.5
2,281,263	+	yejK	b2186	0.30	+1.4
2,281,284	-	yejK	b2186	0.32	+0.2
2,281,284	-	yejK	b2186	0.32	+0.6
2,281,286	+	yejK	b2186	0.32	+0.8
2,281,294	-	yejK	b2186	0.33	+0.1
2,281,323	-	yejK	b2186	0.36	+0.9
2,281,325	+	yejK	b2186	0.36	-3.4
2,281,347	+	yejK	b2186	0.38	-0.7
2,281,377	-	yejK	b2186	0.41	+2.3
2,281,447	+	yejK	b2186	0.48	+0.6
2,281,456	-	yejK	b2186	0.49	-1.8
2,281,483	+	yejK	b2186	0.52	-2.7
2,281,512	-	yejK	b2186	0.55	-0.1
2,281,512	-	yejK	b2186	0.55	-1.8
2,281,780	-	yejK	b2186	0.81	-0.5
2,281,887	+				+1.1
2,281,905	-				+1.3
2,282,004	-				-1.7
2,282,026	+				-0.2
2,282,026	+				+0.8
2,282,256	+	yejL	b2187	0.46	-1.3
2,282,304	+	yejL	b2187	0.67	-0.9
2,283,015	+	yejM	b2188	0.35	-0.7
2,283,060	+	yejM	b2188	0.38	-4.6
2,283,103	-	yejM	b2188	0.40	-2.0
2,283,140	-	yejM	b2188	0.42	-2.9
2,283,162	+	yejM	b2188	0.43	-4.9
2,283,194	-	yejM	b2188	0.45	-2.2
2,283,202	+	yejM	b2188	0.46	-5.4
2,283,202	+	yejM	b2188	0.46	-4.4
2,283,223	+	yejM	b2188	0.47	-3.1
2,283,223	+	yejM	b2188	0.47	-3.6
2,283,226	+	yejM	b2188	0.47	-4.4
2,283,279	+	yejM	b2188	0.50	-5.4
2,283,304	-	yejM	b2188	0.51	-4.6
2,283,324	+	yejM	b2188	0.53	-4.7
2,283,324	+	yejM	b2188	0.53	-7.2