Strain Fitness in Escherichia coli BW25113 around b2049

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
2,120,189	+	cpsG	b2048	0.41	-3.0
2,120,628	-	cpsG	b2048	0.73	-3.3
2,120,645	-	cpsG	b2048	0.74	+0.8
2,120,645	-	cpsG	b2048	0.74	+1.9
2,120,689	+	cpsG	b2048	0.77	+1.6
2,120,759	+	cpsG	b2048	0.82	-2.1
2,120,759	+	cpsG	b2048	0.82	-2.6
2,120,782	-	cpsG	b2048	0.84	+1.6
2,120,814	+	cpsG	b2048	0.86	+1.0
2,120,823	-	cpsG	b2048	0.87	+1.5
2,120,880	-				+1.6
2,120,880	-				-3.4
2,121,026	+				+0.2
2,121,026	+				-2.4
2,121,027	+				+0.7
2,121,354	+	cpsB	b2049	0.17	-2.8
2,121,354	+	cpsB	b2049	0.17	-3.5
2,121,452	+	cpsB	b2049	0.24	-0.0
2,121,452	+	cpsB	b2049	0.24	-2.1
2,121,504	+	cpsB	b2049	0.28	-0.0
2,121,605	+	cpsB	b2049	0.35	-3.0
2,121,742	+	cpsB	b2049	0.44	-0.6
2,121,742	+	cpsB	b2049	0.44	-2.3
2,121,969	+	cpsB	b2049	0.60	-1.8
2,122,061	+	cpsB	b2049	0.66	+0.4
2,122,061	+	cpsB	b2049	0.66	-0.0
2,122,748	+	wcaI	b2050	0.16	-0.8
2,122,748	+	wcaI	b2050	0.16	-0.4
2,123,290	+	wcaI	b2050	0.61	-3.2
2,123,290	+	wcaI	b2050	0.61	-2.8
2,123,479	+	wcaI	b2050	0.76	-0.3