Strain Fitness in Escherichia coli BW25113 around b1892

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
1,974,934	+	motA	b1890	0.74	+0.1
1,974,934	+	motA	b1890	0.74	-0.2
1,975,040	+	motA	b1890	0.86	-0.3
1,975,092	+				+2.2
1,975,093	-				-1.6
1,975,173	+				-0.4
1,975,179	+				+1.5
1,975,179	+				-0.5
1,975,415	-	flhC	b1891	0.22	+2.3
1,975,477	+	flhC	b1891	0.32	-1.6
1,975,589	+	flhC	b1891	0.52	+1.9
1,975,636	+	flhC	b1891	0.60	+1.7
1,975,707	+	flhC	b1891	0.72	+1.6
1,975,914	-	flhD	b1892	0.12	-1.1
1,975,961	-	flhD	b1892	0.26	+0.7
1,975,961	-	flhD	b1892	0.26	-0.6
1,975,991	+	flhD	b1892	0.34	+0.3
1,975,991	-	flhD	b1892	0.34	+1.6
1,976,072	+	flhD	b1892	0.57	+4.5
1,976,072	+	flhD	b1892	0.57	-0.8
1,976,072	+	flhD	b1892	0.57	+1.3
1,976,120	+	flhD	b1892	0.71	-2.0
1,976,120	+	flhD	b1892	0.71	-3.2
1,976,138	+	flhD	b1892	0.76	+3.5
1,976,146	-	flhD	b1892	0.78	+2.6
1,976,149	-	flhD	b1892	0.79	+2.3
1,976,149	-	flhD	b1892	0.79	+3.6
1,976,221	-				-3.3
1,976,226	-				-2.3
1,976,226	-				+0.2
1,976,259	+				+1.2
1,976,262	+				+4.8
1,976,272	+				+2.8
1,976,281	+				+1.8
1,976,354	-				-0.8
1,976,387	+				+1.2
1,976,396	-				-2.6
1,976,432	-				-2.3
1,976,436	+				+1.8
1,976,439	+				+2.0
1,976,439	+				+2.8
1,976,439	+				+0.1
1,976,439	+				+0.9
1,976,444	+				+1.9
1,976,447	-				-3.0
1,976,447	-				-1.6
1,976,447	-				-4.5
1,976,447	-				-1.1
1,976,448	+				-1.3
1,976,452	-				-1.5
1,976,452	-				-2.3
1,976,453	+				+0.6
1,976,454	-				-2.0
1,976,455	-				-2.7
1,976,460	-				-3.0
1,976,514	-				-1.9