Strain Fitness in Escherichia coli BW25113 around b1590

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
1,660,766	+				-1.7
1,660,766	+				+1.0
1,660,779	-				-3.2
1,660,779	-				+1.6
1,660,790	-				-0.9
1,661,057	-				-1.3
1,661,346	-	ynfG	b1589	0.54	-3.9
1,661,351	+	ynfG	b1589	0.55	+1.7
1,661,351	+	ynfG	b1589	0.55	+0.2
1,661,364	-	ynfG	b1589	0.57	-3.0
1,661,755	+	ynfH	b1590	0.14	-0.8
1,661,755	+	ynfH	b1590	0.14	-1.6
1,661,782	-	ynfH	b1590	0.17	-0.2
1,661,851	-	ynfH	b1590	0.25	-0.3
1,662,281	+	ynfH	b1590	0.76	-3.3
1,662,281	+	ynfH	b1590	0.76	-1.3
1,662,405	+				+0.7
1,662,482	+				-1.9
1,662,522	+				+0.3
1,662,589	+				+0.9
1,662,796	+	b1591	b1591	0.43	+1.1
1,662,877	+	b1591	b1591	0.56	+1.8