Strain Fitness in Escherichia coli BW25113 around b1557

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
1,638,405	-				-0.7
1,638,405	-				+1.7
1,638,487	-	b1556	b1556	0.43	-2.2
1,638,489	-	b1556	b1556	0.44	+1.3
1,638,489	-	b1556	b1556	0.44	+0.3
1,638,489	-	b1556	b1556	0.44	+0.2
1,638,495	+	b1556	b1556	0.47	-3.2
1,638,498	-	b1556	b1556	0.48	-2.7
1,638,513	+	b1556	b1556	0.55	-1.9
1,638,624	+				-0.3
1,638,624	+				-0.9
1,638,644	-				+0.7
1,638,653	+				+0.8
1,638,653	+				-4.0
1,638,658	+				-0.5
1,638,667	+				-0.3
1,638,667	+				+0.7
1,638,795	+				+2.3
1,638,800	+				+2.3
1,638,940	+				+0.7
1,638,988	+				-0.0
1,638,988	+				-0.7
1,638,988	+				-1.4
1,639,143	-				-3.1
1,639,143	-				-1.9
1,639,246	-				+2.3
1,639,298	-				+0.5
1,639,406	-	cspB	b1557	0.20	+1.2
1,639,406	-	cspB	b1557	0.20	-2.0
1,639,421	-	cspB	b1557	0.27	+0.4
1,639,632	-				-0.9
1,639,632	-				-4.9
1,639,733	-				+1.2
1,639,753	-				+0.9
1,639,797	+				+0.3
1,639,806	-				-0.0
1,639,834	-				+2.3
1,640,045	+	cspF	b1558	0.78	+1.6
1,640,045	+	cspF	b1558	0.78	+2.7
1,640,069	-	cspF	b1558	0.89	+2.3
1,640,110	+				-4.1
1,640,118	-				+3.3
1,640,124	+				-1.2
1,640,128	+				+1.0
1,640,132	-				-2.1
1,640,132	-				+1.7
1,640,132	-				+0.7
1,640,203	+				+0.9
1,640,204	-				+0.7
1,640,204	-				+0.7
1,640,204	-				+0.3
1,640,265	+				-2.5
1,640,350	+				-2.2
1,640,365	-				-0.9