Strain Fitness in Escherichia coli BW25113 around b1556

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
1,637,421	-	ydfP	b1553	0.74	+0.7
1,637,577	-				+2.9
1,638,002	+	ydfQ	b1554	0.85	-2.7
1,638,079	+				+2.0
1,638,405	-				-0.7
1,638,405	-				+1.7
1,638,487	-	b1556	b1556	0.43	-2.2
1,638,489	-	b1556	b1556	0.44	+1.3
1,638,489	-	b1556	b1556	0.44	+0.3
1,638,489	-	b1556	b1556	0.44	+0.2
1,638,495	+	b1556	b1556	0.47	-3.2
1,638,498	-	b1556	b1556	0.48	-2.7
1,638,513	+	b1556	b1556	0.55	-1.9
1,638,624	+				-0.3
1,638,624	+				-0.9
1,638,644	-				+0.7
1,638,653	+				+0.8
1,638,653	+				-4.0
1,638,658	+				-0.5
1,638,667	+				-0.3
1,638,667	+				+0.7
1,638,795	+				+2.3
1,638,800	+				+2.3
1,638,940	+				+0.7
1,638,988	+				-0.0
1,638,988	+				-0.7
1,638,988	+				-1.4
1,639,143	-				-3.1
1,639,143	-				-1.9
1,639,246	-				+2.3
1,639,298	-				+0.5
1,639,406	-	cspB	b1557	0.20	+1.2
1,639,406	-	cspB	b1557	0.20	-2.0
1,639,421	-	cspB	b1557	0.27	+0.4