Strain Fitness in Escherichia coli BW25113 around b1410

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
1,476,882	-	ynbB	b1409	0.70	+2.4
1,476,882	-	ynbB	b1409	0.70	+2.4
1,476,902	+	ynbB	b1409	0.73	+1.4
1,476,924	+	ynbB	b1409	0.75	-1.2
1,476,934	+	ynbB	b1409	0.76	+0.4
1,476,934	+	ynbB	b1409	0.76	+2.4
1,477,000	+	ynbB	b1409	0.84	+2.4
1,477,008	+	ynbB	b1409	0.85	-0.8
1,477,055	+	ynbB	b1409	0.90	+2.4
1,477,064	-				+2.4
1,477,066	+				+2.4
1,477,074	+				+2.2
1,477,088	+				+0.4
1,477,214	-				-3.4
1,477,256	-				+2.2
1,477,265	-				-1.5
1,477,317	-				-4.2
1,477,333	-				+0.3
1,477,397	+	ynbC	b1410	0.13	-3.1
1,477,401	-	ynbC	b1410	0.14	-4.3
1,477,563	-	ynbC	b1410	0.23	+0.9
1,477,563	-	ynbC	b1410	0.23	-3.9
1,477,624	-	ynbC	b1410	0.26	-1.6
1,477,688	-	ynbC	b1410	0.30	-2.0
1,477,781	-	ynbC	b1410	0.35	-1.6
1,477,859	-	ynbC	b1410	0.40	-2.2
1,478,058	+	ynbC	b1410	0.51	-0.2
1,478,302	-	ynbC	b1410	0.65	+0.9
1,478,317	-	ynbC	b1410	0.66	-2.1
1,478,327	+	ynbC	b1410	0.66	+0.4
1,478,410	+	ynbC	b1410	0.71	-0.7
1,479,031	-				+1.4
1,479,098	+	ynbD	b1411	0.13	-1.2
1,479,163	+	ynbD	b1411	0.18	+0.0
1,479,431	-	ynbD	b1411	0.39	-0.8
1,479,489	+	ynbD	b1411	0.43	+0.8
1,479,501	+	ynbD	b1411	0.44	-2.5
1,479,504	+	ynbD	b1411	0.44	-1.9
1,479,574	-	ynbD	b1411	0.50	-2.4
1,479,579	-	ynbD	b1411	0.50	-2.1
1,479,579	-	ynbD	b1411	0.50	+2.2
1,479,586	-	ynbD	b1411	0.51	-2.7
1,479,670	-	ynbD	b1411	0.57	+1.2
1,479,673	+	ynbD	b1411	0.57	-0.8