Strain Fitness in Escherichia coli BW25113 around b1327

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
1,388,090	+	mpaA	b1326	0.27	-3.3
1,388,195	-	mpaA	b1326	0.41	-2.0
1,388,195	-	mpaA	b1326	0.41	-2.8
1,388,195	-	mpaA	b1326	0.41	-0.9
1,388,351	-	mpaA	b1326	0.63	-0.4
1,388,438	+	mpaA	b1326	0.75	+0.9
1,388,438	+	mpaA	b1326	0.75	-2.9
1,388,446	-	mpaA	b1326	0.76	-0.0
1,388,611	+				+0.5
1,388,628	+				-0.6
1,388,645	+				-0.5
1,388,797	+	ymjC	b4525	0.35	+0.4
1,388,930	-	ymjD	b4673	0.58	+3.8
1,388,980	+				+0.8
1,389,094	-	ycjY	b1327	0.15	+2.0
1,389,116	-	ycjY	b1327	0.17	+1.7
1,389,118	-	ycjY	b1327	0.17	-1.6
1,389,195	+	ycjY	b1327	0.26	+2.8
1,389,242	-	ycjY	b1327	0.31	+1.9
1,389,253	+	ycjY	b1327	0.32	-2.5
1,389,253	+	ycjY	b1327	0.32	-1.3
1,389,298	+	ycjY	b1327	0.37	+3.3
1,389,315	-	ycjY	b1327	0.39	-2.3
1,389,315	-	ycjY	b1327	0.39	+1.4
1,389,331	-				-0.2
1,389,405	-	ycjY	b1327	0.49	+1.0
1,389,405	-	ycjY	b1327	0.49	+1.7
1,389,465	-	ycjY	b1327	0.55	-2.1
1,389,477	-	ycjY	b1327	0.56	-3.8
1,389,488	+	ycjY	b1327	0.58	-2.7
1,389,514	+	ycjY	b1327	0.60	-3.4
1,389,515	-	ycjY	b1327	0.61	-1.7
1,389,520	-	ycjY	b1327	0.61	+0.9
1,389,573	+	ycjY	b1327	0.67	+1.5
1,389,602	-	ycjY	b1327	0.70	-3.9
1,389,648	-	ycjY	b1327	0.75	+2.7
1,389,676	+	ycjY	b1327	0.78	+0.1
1,389,689	-	ycjY	b1327	0.79	+2.1
1,389,743	+	ycjY	b1327	0.85	+0.5
1,389,743	+	ycjY	b1327	0.85	-0.5
1,389,821	+				-2.4
1,389,891	+				-3.8
1,389,893	+				+0.6
1,389,913	-				-1.2
1,390,005	+				-0.5
1,390,058	+				-2.3
1,390,136	+	ycjZ	b1328	0.13	-1.7
1,390,136	+	ycjZ	b1328	0.13	-2.7
1,390,144	-	ycjZ	b1328	0.14	+0.2
1,390,189	+	ycjZ	b1328	0.19	+0.9
1,390,189	+	ycjZ	b1328	0.19	-3.2
1,390,220	-	ycjZ	b1328	0.23	+3.0
1,390,220	-	ycjZ	b1328	0.23	+2.2
1,390,234	+	ycjZ	b1328	0.24	+1.7
1,390,234	+	ycjZ	b1328	0.24	+0.6
1,390,237	-	ycjZ	b1328	0.25	-2.1
1,390,259	+	ycjZ	b1328	0.27	-3.9
1,390,302	+	ycjZ	b1328	0.32	+0.5
1,390,320	-	ycjZ	b1328	0.34	-2.6
1,390,349	-	ycjZ	b1328	0.37	-3.3
1,390,572	+	ycjZ	b1328	0.62	-2.1
1,390,572	+	ycjZ	b1328	0.62	-1.5
1,390,604	+	ycjZ	b1328	0.65	-3.6
1,390,636	+	ycjZ	b1328	0.69	+0.8
1,390,636	+	ycjZ	b1328	0.69	-2.2
1,390,641	-	ycjZ	b1328	0.70	+0.8
1,390,642	-	ycjZ	b1328	0.70	+3.7
1,390,644	+	ycjZ	b1328	0.70	+0.1
1,390,644	+	ycjZ	b1328	0.70	-1.2
1,390,644	+	ycjZ	b1328	0.70	-1.1
1,390,686	+	ycjZ	b1328	0.75	-1.3
1,390,723	-	ycjZ	b1328	0.79	+1.4
1,390,732	+	ycjZ	b1328	0.80	-1.8
1,390,767	+	ycjZ	b1328	0.84	+0.2
1,390,823	-	ycjZ	b1328	0.90	+2.4
1,390,831	+				+0.9
1,390,831	+				-1.4
1,390,831	+				-3.5
1,390,831	+				-1.5
1,390,839	-				-0.8
1,390,850	+				+2.0
1,390,872	+				-2.5