Strain Fitness in Escherichia coli BW25113 around b0877

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
916,374	-	ybjD	b0876	0.41	+1.5
916,463	+	ybjD	b0876	0.46	+0.0
916,463	+	ybjD	b0876	0.46	-0.6
916,540	-	ybjD	b0876	0.51	-3.1
916,546	+	ybjD	b0876	0.51	+2.4
916,717	-	ybjD	b0876	0.62	-1.5
916,717	-	ybjD	b0876	0.62	-3.2
916,823	+	ybjD	b0876	0.68	+1.6
916,823	+	ybjD	b0876	0.68	-0.2
916,869	+	ybjD	b0876	0.71	-1.5
916,869	+	ybjD	b0876	0.71	+0.6
916,989	+	ybjD	b0876	0.78	-0.6
917,422	-				+1.0
917,467	+	ybjX	b0877	0.12	-1.6
917,467	+	ybjX	b0877	0.12	+0.4
917,528	+	ybjX	b0877	0.18	-0.2
917,528	+	ybjX	b0877	0.18	+1.1
917,643	-	ybjX	b0877	0.29	+0.6
917,658	-	ybjX	b0877	0.31	-2.2
917,658	-	ybjX	b0877	0.31	+4.0
917,775	+	ybjX	b0877	0.43	-4.0
917,828	+	ybjX	b0877	0.48	+1.7
917,838	+	ybjX	b0877	0.49	+2.1
917,878	+	ybjX	b0877	0.53	+1.6
917,878	+	ybjX	b0877	0.53	+1.9
917,891	-	ybjX	b0877	0.54	-1.0
917,948	-	ybjX	b0877	0.60	-0.8
918,050	-	ybjX	b0877	0.70	-2.7
918,059	+	ybjX	b0877	0.71	-1.0
918,271	+				-1.0
918,484	+				+1.1
918,620	+	b0878	b0878	0.15	+1.7
918,789	-	b0878	b0878	0.30	-3.9
918,849	-				-1.4
918,849	-	b0878	b0878	0.35	+0.1
918,985	+	b0878	b0878	0.47	+1.6
919,227	-	b0878	b0878	0.69	+3.0
919,262	+	b0878	b0878	0.72	-4.6
919,262	+	b0878	b0878	0.72	+1.5
919,298	-	b0878	b0878	0.75	+0.3
919,298	-	b0878	b0878	0.75	-0.9
919,343	+	b0878	b0878	0.79	-1.5