Strain Fitness in Escherichia coli BW25113 around b0876

Experiment: Tetrahymena sp., Mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetrahymena sp., Mixed culture-1
914,702	-	aqpZ	b0875	0.18	+1.5
914,720	-	aqpZ	b0875	0.21	+1.0
914,757	+	aqpZ	b0875	0.26	+1.3
914,764	+	aqpZ	b0875	0.27	-1.4
914,767	-	aqpZ	b0875	0.28	-3.9
914,767	-	aqpZ	b0875	0.28	-4.4
914,784	+	aqpZ	b0875	0.30	-0.8
914,911	+	aqpZ	b0875	0.48	+0.8
914,941	+	aqpZ	b0875	0.53	-0.5
914,941	+	aqpZ	b0875	0.53	-1.5
914,998	+	aqpZ	b0875	0.61	+2.5
914,998	+	aqpZ	b0875	0.61	+1.9
915,193	+	aqpZ	b0875	0.89	-1.6
915,198	+	aqpZ	b0875	0.90	+1.9
915,198	+	aqpZ	b0875	0.90	+0.4
915,198	+	aqpZ	b0875	0.90	-1.8
915,203	+				-2.9
915,203	+				+0.3
915,203	+				-1.8
915,203	+				+4.0
915,206	-				-3.8
915,206	-				+1.2
915,206	-				-3.6
915,206	-				-0.9
915,206	-				+0.6
915,226	-				-1.8
915,226	-				+2.2
915,279	+				+1.1
915,279	+				+1.7
915,437	-				+1.2
915,461	-				+0.8
915,461	-				+0.1
915,473	-				-2.2
915,570	-				-0.5
915,616	-				-2.2
915,616	-				+1.1
915,616	-				-1.1
915,616	-				+3.5
915,647	+				+0.1
915,647	-				+0.4
915,700	+				+1.3
915,705	-				-3.2
915,710	+				-2.6
915,783	-				-2.0
915,794	+				+5.1
915,817	+				+1.7
915,817	+				+1.5
915,841	+				+0.9
915,909	+	ybjD	b0876	0.13	+1.3
915,970	-	ybjD	b0876	0.17	-0.6
916,056	-	ybjD	b0876	0.22	+0.4
916,212	+	ybjD	b0876	0.31	+0.4
916,330	+	ybjD	b0876	0.38	-0.4
916,334	+	ybjD	b0876	0.38	-4.1
916,374	-	ybjD	b0876	0.41	+1.5
916,463	+	ybjD	b0876	0.46	+0.0
916,463	+	ybjD	b0876	0.46	-0.6
916,540	-	ybjD	b0876	0.51	-3.1
916,546	+	ybjD	b0876	0.51	+2.4
916,717	-	ybjD	b0876	0.62	-1.5
916,717	-	ybjD	b0876	0.62	-3.2
916,823	+	ybjD	b0876	0.68	+1.6
916,823	+	ybjD	b0876	0.68	-0.2
916,869	+	ybjD	b0876	0.71	-1.5
916,869	+	ybjD	b0876	0.71	+0.6
916,989	+	ybjD	b0876	0.78	-0.6
917,422	-				+1.0
917,467	+	ybjX	b0877	0.12	-1.6
917,467	+	ybjX	b0877	0.12	+0.4
917,528	+	ybjX	b0877	0.18	-0.2
917,528	+	ybjX	b0877	0.18	+1.1
917,643	-	ybjX	b0877	0.29	+0.6
917,658	-	ybjX	b0877	0.31	-2.2
917,658	-	ybjX	b0877	0.31	+4.0
917,775	+	ybjX	b0877	0.43	-4.0
917,828	+	ybjX	b0877	0.48	+1.7
917,838	+	ybjX	b0877	0.49	+2.1
917,878	+	ybjX	b0877	0.53	+1.6
917,878	+	ybjX	b0877	0.53	+1.9
917,891	-	ybjX	b0877	0.54	-1.0
917,948	-	ybjX	b0877	0.60	-0.8
918,050	-	ybjX	b0877	0.70	-2.7
918,059	+	ybjX	b0877	0.71	-1.0
918,271	+				-1.0