Experiment: BR1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01033 and OHPLBJKB_01034 are separated by 144 nucleotides OHPLBJKB_01034 and OHPLBJKB_01035 are separated by 79 nucleotides
OHPLBJKB_01033: OHPLBJKB_01033 - Membrane-bound lytic murein transglycosylase B, at 1,067,803 to 1,068,993
_01033
OHPLBJKB_01034: OHPLBJKB_01034 - Nicotinamide-nucleotide amidohydrolase PncC, at 1,069,138 to 1,069,635
_01034
OHPLBJKB_01035: OHPLBJKB_01035 - Protein RecA, at 1,069,715 to 1,070,776
_01035
Position (kb)
1069
1070 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 1068.270 kb on + strand, within OHPLBJKB_01033 at 1068.273 kb on + strand, within OHPLBJKB_01033 at 1068.316 kb on + strand, within OHPLBJKB_01033 at 1068.317 kb on - strand, within OHPLBJKB_01033 at 1068.349 kb on + strand, within OHPLBJKB_01033 at 1068.349 kb on + strand, within OHPLBJKB_01033 at 1068.349 kb on + strand, within OHPLBJKB_01033 at 1068.349 kb on + strand, within OHPLBJKB_01033 at 1068.349 kb on + strand, within OHPLBJKB_01033 at 1068.350 kb on - strand, within OHPLBJKB_01033 at 1068.350 kb on - strand, within OHPLBJKB_01033 at 1068.456 kb on + strand, within OHPLBJKB_01033 at 1068.456 kb on + strand, within OHPLBJKB_01033 at 1068.456 kb on + strand, within OHPLBJKB_01033 at 1068.456 kb on + strand, within OHPLBJKB_01033 at 1068.456 kb on + strand, within OHPLBJKB_01033 at 1068.457 kb on - strand, within OHPLBJKB_01033 at 1068.457 kb on - strand, within OHPLBJKB_01033 at 1068.457 kb on - strand, within OHPLBJKB_01033 at 1068.457 kb on - strand, within OHPLBJKB_01033 at 1068.457 kb on - strand, within OHPLBJKB_01033 at 1068.457 kb on - strand, within OHPLBJKB_01033 at 1068.461 kb on - strand, within OHPLBJKB_01033 at 1068.478 kb on + strand, within OHPLBJKB_01033 at 1068.585 kb on + strand, within OHPLBJKB_01033 at 1068.585 kb on + strand, within OHPLBJKB_01033 at 1068.586 kb on - strand, within OHPLBJKB_01033 at 1068.586 kb on - strand, within OHPLBJKB_01033 at 1068.586 kb on - strand, within OHPLBJKB_01033 at 1068.598 kb on + strand, within OHPLBJKB_01033 at 1068.598 kb on + strand, within OHPLBJKB_01033 at 1068.599 kb on - strand, within OHPLBJKB_01033 at 1068.607 kb on + strand, within OHPLBJKB_01033 at 1068.608 kb on - strand, within OHPLBJKB_01033 at 1068.608 kb on - strand, within OHPLBJKB_01033 at 1068.636 kb on + strand, within OHPLBJKB_01033 at 1068.636 kb on + strand, within OHPLBJKB_01033 at 1068.637 kb on - strand, within OHPLBJKB_01033 at 1068.682 kb on + strand, within OHPLBJKB_01033 at 1068.683 kb on - strand, within OHPLBJKB_01033 at 1068.771 kb on + strand, within OHPLBJKB_01033 at 1068.771 kb on + strand, within OHPLBJKB_01033 at 1068.771 kb on + strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.772 kb on - strand, within OHPLBJKB_01033 at 1068.775 kb on + strand, within OHPLBJKB_01033 at 1068.775 kb on + strand, within OHPLBJKB_01033 at 1068.776 kb on - strand, within OHPLBJKB_01033 at 1068.776 kb on - strand, within OHPLBJKB_01033 at 1068.776 kb on - strand, within OHPLBJKB_01033 at 1068.807 kb on - strand, within OHPLBJKB_01033 at 1068.904 kb on + strand at 1068.904 kb on + strand at 1068.904 kb on + strand at 1068.905 kb on - strand at 1068.905 kb on - strand at 1068.905 kb on - strand at 1068.959 kb on + strand at 1068.960 kb on - strand at 1068.960 kb on - strand at 1068.960 kb on - strand at 1068.960 kb on - strand at 1068.986 kb on + strand at 1068.986 kb on + strand at 1068.986 kb on + strand at 1068.986 kb on + strand at 1068.987 kb on - strand at 1068.987 kb on - strand at 1068.987 kb on - strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.991 kb on + strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.992 kb on - strand at 1068.995 kb on + strand at 1068.995 kb on + strand at 1068.995 kb on + strand at 1068.995 kb on + strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.996 kb on - strand at 1068.999 kb on + strand at 1068.999 kb on + strand at 1069.000 kb on - strand at 1069.098 kb on + strand at 1069.098 kb on + strand at 1069.098 kb on + strand at 1069.099 kb on - strand at 1069.164 kb on - strand at 1069.164 kb on - strand at 1069.208 kb on + strand, within OHPLBJKB_01034 at 1069.208 kb on + strand, within OHPLBJKB_01034 at 1069.227 kb on + strand, within OHPLBJKB_01034 at 1069.254 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.303 kb on + strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.304 kb on - strand, within OHPLBJKB_01034 at 1069.429 kb on + strand, within OHPLBJKB_01034 at 1069.440 kb on + strand, within OHPLBJKB_01034 at 1069.440 kb on + strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.441 kb on - strand, within OHPLBJKB_01034 at 1069.443 kb on + strand, within OHPLBJKB_01034 at 1069.444 kb on - strand, within OHPLBJKB_01034 at 1069.444 kb on - strand, within OHPLBJKB_01034 at 1069.592 kb on - strand at 1069.592 kb on - strand at 1069.592 kb on - strand at 1069.622 kb on + strand at 1069.675 kb on + strand at 1069.675 kb on + strand at 1069.676 kb on - strand at 1069.689 kb on + strand at 1070.024 kb on + strand, within OHPLBJKB_01035 at 1070.024 kb on + strand, within OHPLBJKB_01035 at 1070.025 kb on - strand, within OHPLBJKB_01035 at 1070.224 kb on + strand, within OHPLBJKB_01035 at 1070.224 kb on + strand, within OHPLBJKB_01035 at 1070.225 kb on - strand, within OHPLBJKB_01035 at 1070.225 kb on - strand, within OHPLBJKB_01035 at 1070.245 kb on + strand, within OHPLBJKB_01035 at 1070.370 kb on - strand, within OHPLBJKB_01035 at 1070.370 kb on - strand, within OHPLBJKB_01035 at 1070.518 kb on + strand, within OHPLBJKB_01035 at 1070.519 kb on - strand, within OHPLBJKB_01035 at 1070.594 kb on + strand, within OHPLBJKB_01035 at 1070.595 kb on - strand, within OHPLBJKB_01035
Per-strain Table
Position Strand Gene LocusTag Fraction BR1 remove 1,068,270 + OHPLBJKB_01033 0.39 +0.0 1,068,273 + OHPLBJKB_01033 0.39 +0.3 1,068,316 + OHPLBJKB_01033 0.43 -1.2 1,068,317 - OHPLBJKB_01033 0.43 -1.7 1,068,349 + OHPLBJKB_01033 0.46 -1.5 1,068,349 + OHPLBJKB_01033 0.46 +0.9 1,068,349 + OHPLBJKB_01033 0.46 -0.1 1,068,349 + OHPLBJKB_01033 0.46 +0.4 1,068,349 + OHPLBJKB_01033 0.46 +1.1 1,068,350 - OHPLBJKB_01033 0.46 -2.3 1,068,350 - OHPLBJKB_01033 0.46 +0.2 1,068,456 + OHPLBJKB_01033 0.55 +1.8 1,068,456 + OHPLBJKB_01033 0.55 -2.1 1,068,456 + OHPLBJKB_01033 0.55 -0.6 1,068,456 + OHPLBJKB_01033 0.55 -1.4 1,068,456 + OHPLBJKB_01033 0.55 -0.6 1,068,457 - OHPLBJKB_01033 0.55 -1.3 1,068,457 - OHPLBJKB_01033 0.55 +3.4 1,068,457 - OHPLBJKB_01033 0.55 -0.2 1,068,457 - OHPLBJKB_01033 0.55 -1.0 1,068,457 - OHPLBJKB_01033 0.55 -3.3 1,068,457 - OHPLBJKB_01033 0.55 -0.6 1,068,461 - OHPLBJKB_01033 0.55 +0.4 1,068,478 + OHPLBJKB_01033 0.57 -0.3 1,068,585 + OHPLBJKB_01033 0.66 +0.0 1,068,585 + OHPLBJKB_01033 0.66 -0.3 1,068,586 - OHPLBJKB_01033 0.66 -0.5 1,068,586 - OHPLBJKB_01033 0.66 -1.6 1,068,586 - OHPLBJKB_01033 0.66 +0.6 1,068,598 + OHPLBJKB_01033 0.67 -1.5 1,068,598 + OHPLBJKB_01033 0.67 +1.1 1,068,599 - OHPLBJKB_01033 0.67 +1.2 1,068,607 + OHPLBJKB_01033 0.68 +0.7 1,068,608 - OHPLBJKB_01033 0.68 +2.1 1,068,608 - OHPLBJKB_01033 0.68 -0.2 1,068,636 + OHPLBJKB_01033 0.70 +0.4 1,068,636 + OHPLBJKB_01033 0.70 -0.6 1,068,637 - OHPLBJKB_01033 0.70 -0.3 1,068,682 + OHPLBJKB_01033 0.74 -0.7 1,068,683 - OHPLBJKB_01033 0.74 -1.3 1,068,771 + OHPLBJKB_01033 0.81 -0.9 1,068,771 + OHPLBJKB_01033 0.81 +0.0 1,068,771 + OHPLBJKB_01033 0.81 +0.2 1,068,772 - OHPLBJKB_01033 0.81 -1.4 1,068,772 - OHPLBJKB_01033 0.81 -0.6 1,068,772 - OHPLBJKB_01033 0.81 -0.0 1,068,772 - OHPLBJKB_01033 0.81 -1.8 1,068,772 - OHPLBJKB_01033 0.81 +0.6 1,068,772 - OHPLBJKB_01033 0.81 +0.2 1,068,775 + OHPLBJKB_01033 0.82 -2.2 1,068,775 + OHPLBJKB_01033 0.82 -2.6 1,068,776 - OHPLBJKB_01033 0.82 +1.1 1,068,776 - OHPLBJKB_01033 0.82 +0.7 1,068,776 - OHPLBJKB_01033 0.82 +0.2 1,068,807 - OHPLBJKB_01033 0.84 -2.0 1,068,904 + -1.0 1,068,904 + -0.7 1,068,904 + -0.5 1,068,905 - -0.4 1,068,905 - -0.8 1,068,905 - +0.7 1,068,959 + -0.7 1,068,960 - +0.8 1,068,960 - -2.1 1,068,960 - -2.2 1,068,960 - +0.5 1,068,986 + +0.4 1,068,986 + +1.0 1,068,986 + -0.7 1,068,986 + -0.3 1,068,987 - -0.3 1,068,987 - +0.3 1,068,987 - +0.8 1,068,991 + -0.9 1,068,991 + +0.2 1,068,991 + +1.1 1,068,991 + +0.3 1,068,991 + +0.0 1,068,991 + +1.9 1,068,992 - -0.8 1,068,992 - -0.6 1,068,992 - -3.1 1,068,992 - -2.0 1,068,992 - +0.5 1,068,992 - +2.0 1,068,995 + +0.3 1,068,995 + -2.6 1,068,995 + -1.8 1,068,995 + -1.2 1,068,996 - -1.3 1,068,996 - +0.2 1,068,996 - -3.3 1,068,996 - -1.0 1,068,996 - +0.0 1,068,996 - +1.0 1,068,996 - -1.4 1,068,996 - -0.2 1,068,999 + +0.3 1,068,999 + -0.3 1,069,000 - -1.2 1,069,098 + -0.0 1,069,098 + +0.4 1,069,098 + +0.1 1,069,099 - +0.4 1,069,164 - -2.4 1,069,164 - -0.8 1,069,208 + OHPLBJKB_01034 0.14 -0.4 1,069,208 + OHPLBJKB_01034 0.14 -0.3 1,069,227 + OHPLBJKB_01034 0.18 +1.4 1,069,254 + OHPLBJKB_01034 0.23 +1.9 1,069,303 + OHPLBJKB_01034 0.33 -0.7 1,069,303 + OHPLBJKB_01034 0.33 +0.2 1,069,303 + OHPLBJKB_01034 0.33 -1.0 1,069,303 + OHPLBJKB_01034 0.33 +0.1 1,069,304 - OHPLBJKB_01034 0.33 -0.0 1,069,304 - OHPLBJKB_01034 0.33 -0.1 1,069,304 - OHPLBJKB_01034 0.33 +1.6 1,069,304 - OHPLBJKB_01034 0.33 -0.2 1,069,304 - OHPLBJKB_01034 0.33 +1.1 1,069,304 - OHPLBJKB_01034 0.33 -0.6 1,069,304 - OHPLBJKB_01034 0.33 +0.6 1,069,304 - OHPLBJKB_01034 0.33 +2.2 1,069,429 + OHPLBJKB_01034 0.58 +6.1 1,069,440 + OHPLBJKB_01034 0.61 -1.0 1,069,440 + OHPLBJKB_01034 0.61 +1.7 1,069,441 - OHPLBJKB_01034 0.61 +1.4 1,069,441 - OHPLBJKB_01034 0.61 -0.2 1,069,441 - OHPLBJKB_01034 0.61 +0.2 1,069,441 - OHPLBJKB_01034 0.61 -1.9 1,069,443 + OHPLBJKB_01034 0.61 -0.5 1,069,444 - OHPLBJKB_01034 0.61 +1.3 1,069,444 - OHPLBJKB_01034 0.61 -1.9 1,069,592 - +0.8 1,069,592 - +0.4 1,069,592 - -0.9 1,069,622 + +1.0 1,069,675 + +0.1 1,069,675 + -1.8 1,069,676 - -1.2 1,069,689 + +0.1 1,070,024 + OHPLBJKB_01035 0.29 -0.7 1,070,024 + OHPLBJKB_01035 0.29 -0.7 1,070,025 - OHPLBJKB_01035 0.29 -0.2 1,070,224 + OHPLBJKB_01035 0.48 +2.4 1,070,224 + OHPLBJKB_01035 0.48 +0.6 1,070,225 - OHPLBJKB_01035 0.48 -0.6 1,070,225 - OHPLBJKB_01035 0.48 -0.9 1,070,245 + OHPLBJKB_01035 0.50 +0.4 1,070,370 - OHPLBJKB_01035 0.62 -1.2 1,070,370 - OHPLBJKB_01035 0.62 -0.7 1,070,518 + OHPLBJKB_01035 0.76 +0.8 1,070,519 - OHPLBJKB_01035 0.76 -1.0 1,070,594 + OHPLBJKB_01035 0.83 +2.4 1,070,595 - OHPLBJKB_01035 0.83 -0.4
Or see this region's nucleotide sequence