Experiment: SP
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04417 and OHPLBJKB_04418 are separated by 901 nucleotides OHPLBJKB_04418 and OHPLBJKB_04419 are separated by 216 nucleotides OHPLBJKB_04419 and OHPLBJKB_04420 overlap by 4 nucleotides
OHPLBJKB_04417: OHPLBJKB_04417 - hypothetical protein, at 69,788 to 70,075
_04417
OHPLBJKB_04418: OHPLBJKB_04418 - Protein FlmC, at 70,977 to 71,189
_04418
OHPLBJKB_04419: OHPLBJKB_04419 - hypothetical protein, at 71,406 to 72,125
_04419
OHPLBJKB_04420: OHPLBJKB_04420 - Protein PsiB, at 72,122 to 72,556
_04420
Position (kb) 70
71
72 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 70.039 kb on - strand, within OHPLBJKB_04417 at 70.060 kb on + strand at 70.060 kb on + strand at 70.452 kb on + strand at 70.452 kb on + strand at 70.713 kb on + strand at 70.714 kb on - strand at 70.853 kb on - strand at 70.853 kb on - strand at 70.853 kb on - strand at 70.902 kb on - strand at 70.974 kb on + strand at 71.062 kb on - strand, within OHPLBJKB_04418 at 71.062 kb on - strand, within OHPLBJKB_04418 at 71.124 kb on - strand, within OHPLBJKB_04418 at 71.310 kb on + strand at 71.501 kb on + strand, within OHPLBJKB_04419 at 71.743 kb on + strand, within OHPLBJKB_04419 at 71.743 kb on + strand, within OHPLBJKB_04419 at 71.744 kb on - strand, within OHPLBJKB_04419 at 71.887 kb on + strand, within OHPLBJKB_04419 at 71.887 kb on + strand, within OHPLBJKB_04419 at 71.888 kb on - strand, within OHPLBJKB_04419 at 71.888 kb on - strand, within OHPLBJKB_04419 at 71.888 kb on - strand, within OHPLBJKB_04419 at 72.117 kb on + strand at 72.117 kb on + strand at 72.118 kb on - strand at 72.118 kb on - strand at 72.125 kb on + strand at 72.125 kb on + strand at 72.126 kb on - strand at 72.126 kb on - strand at 72.152 kb on - strand at 72.184 kb on + strand, within OHPLBJKB_04420
Per-strain Table
Position Strand Gene LocusTag Fraction SP remove 70,039 - OHPLBJKB_04417 0.87 +0.0 70,060 + +1.3 70,060 + -0.2 70,452 + +1.1 70,452 + +1.1 70,713 + +0.5 70,714 - -0.1 70,853 - -2.1 70,853 - +0.1 70,853 - +0.9 70,902 - -0.3 70,974 + -0.8 71,062 - OHPLBJKB_04418 0.40 +0.8 71,062 - OHPLBJKB_04418 0.40 +0.8 71,124 - OHPLBJKB_04418 0.69 +1.5 71,310 + +0.5 71,501 + OHPLBJKB_04419 0.13 -0.7 71,743 + OHPLBJKB_04419 0.47 +0.4 71,743 + OHPLBJKB_04419 0.47 +1.8 71,744 - OHPLBJKB_04419 0.47 -2.5 71,887 + OHPLBJKB_04419 0.67 -0.6 71,887 + OHPLBJKB_04419 0.67 +0.8 71,888 - OHPLBJKB_04419 0.67 +1.5 71,888 - OHPLBJKB_04419 0.67 -0.7 71,888 - OHPLBJKB_04419 0.67 -1.2 72,117 + -0.4 72,117 + +0.4 72,118 - +0.6 72,118 - -0.5 72,125 + -1.3 72,125 + +0.9 72,126 - -0.7 72,126 - +0.7 72,152 - -2.1 72,184 + OHPLBJKB_04420 0.14 +2.8
Or see this region's nucleotide sequence