Experiment: SP
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03383 and OHPLBJKB_03384 are separated by 124 nucleotides OHPLBJKB_03384 and OHPLBJKB_03385 are separated by 360 nucleotides OHPLBJKB_03385 and OHPLBJKB_03386 overlap by 1 nucleotides
OHPLBJKB_03383: OHPLBJKB_03383 - hypothetical protein, at 3,541,694 to 3,541,813
_03383
OHPLBJKB_03384: OHPLBJKB_03384 - putative membrane protein YkgR, at 3,541,938 to 3,542,039
_03384
OHPLBJKB_03385: OHPLBJKB_03385 - 50S ribosomal protein L31 type B, at 3,542,400 to 3,542,666
_03385
OHPLBJKB_03386: OHPLBJKB_03386 - 50S ribosomal protein L36 2, at 3,542,666 to 3,542,806
_03386
Position (kb)
3542
3543 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3541.410 kb on - strand at 3541.463 kb on - strand at 3541.470 kb on + strand at 3541.488 kb on - strand at 3541.572 kb on - strand at 3541.589 kb on + strand at 3541.590 kb on - strand at 3541.597 kb on + strand at 3541.597 kb on + strand at 3541.598 kb on - strand at 3541.602 kb on - strand at 3541.611 kb on - strand at 3541.625 kb on + strand at 3541.669 kb on - strand at 3541.789 kb on + strand, within OHPLBJKB_03383 at 3541.789 kb on + strand, within OHPLBJKB_03383 at 3541.790 kb on - strand, within OHPLBJKB_03383 at 3541.790 kb on - strand, within OHPLBJKB_03383 at 3541.791 kb on + strand, within OHPLBJKB_03383 at 3541.791 kb on + strand, within OHPLBJKB_03383 at 3541.811 kb on + strand at 3541.887 kb on + strand at 3541.890 kb on - strand at 3541.892 kb on - strand at 3542.017 kb on - strand, within OHPLBJKB_03384 at 3542.073 kb on + strand at 3542.130 kb on - strand at 3542.154 kb on - strand at 3542.313 kb on + strand at 3542.364 kb on + strand at 3542.365 kb on - strand at 3542.365 kb on - strand at 3542.432 kb on + strand, within OHPLBJKB_03385 at 3542.432 kb on + strand, within OHPLBJKB_03385 at 3542.432 kb on + strand, within OHPLBJKB_03385 at 3542.433 kb on - strand, within OHPLBJKB_03385 at 3542.433 kb on - strand, within OHPLBJKB_03385 at 3542.433 kb on - strand, within OHPLBJKB_03385 at 3542.433 kb on - strand, within OHPLBJKB_03385 at 3542.433 kb on - strand, within OHPLBJKB_03385 at 3542.456 kb on + strand, within OHPLBJKB_03385 at 3542.466 kb on + strand, within OHPLBJKB_03385 at 3542.466 kb on + strand, within OHPLBJKB_03385 at 3542.471 kb on + strand, within OHPLBJKB_03385 at 3542.521 kb on + strand, within OHPLBJKB_03385 at 3542.527 kb on - strand, within OHPLBJKB_03385 at 3542.532 kb on + strand, within OHPLBJKB_03385 at 3542.533 kb on - strand, within OHPLBJKB_03385 at 3542.533 kb on - strand, within OHPLBJKB_03385 at 3542.571 kb on + strand, within OHPLBJKB_03385 at 3542.572 kb on - strand, within OHPLBJKB_03385 at 3542.677 kb on + strand at 3542.744 kb on + strand, within OHPLBJKB_03386 at 3542.744 kb on + strand, within OHPLBJKB_03386 at 3542.745 kb on - strand, within OHPLBJKB_03386 at 3542.745 kb on - strand, within OHPLBJKB_03386 at 3542.745 kb on - strand, within OHPLBJKB_03386 at 3542.745 kb on - strand, within OHPLBJKB_03386 at 3542.773 kb on + strand, within OHPLBJKB_03386 at 3542.830 kb on + strand at 3542.874 kb on + strand at 3542.874 kb on + strand at 3542.874 kb on + strand at 3542.875 kb on - strand at 3542.875 kb on - strand at 3542.877 kb on - strand at 3542.905 kb on + strand at 3542.966 kb on + strand at 3542.998 kb on + strand at 3542.999 kb on - strand at 3542.999 kb on - strand at 3543.084 kb on + strand at 3543.085 kb on - strand at 3543.092 kb on + strand at 3543.093 kb on - strand at 3543.101 kb on + strand at 3543.101 kb on + strand at 3543.102 kb on - strand at 3543.113 kb on + strand at 3543.114 kb on - strand at 3543.114 kb on - strand at 3543.116 kb on + strand at 3543.117 kb on - strand at 3543.122 kb on - strand at 3543.190 kb on + strand at 3543.190 kb on + strand at 3543.191 kb on - strand at 3543.209 kb on - strand at 3543.209 kb on - strand at 3543.270 kb on + strand at 3543.316 kb on + strand at 3543.316 kb on + strand at 3543.316 kb on + strand at 3543.316 kb on + strand at 3543.316 kb on + strand at 3543.316 kb on + strand at 3543.316 kb on + strand at 3543.316 kb on + strand at 3543.317 kb on - strand at 3543.317 kb on - strand at 3543.317 kb on - strand at 3543.317 kb on - strand at 3543.317 kb on - strand at 3543.320 kb on + strand at 3543.320 kb on + strand at 3543.321 kb on - strand at 3543.321 kb on - strand at 3543.345 kb on + strand at 3543.346 kb on - strand at 3543.361 kb on + strand at 3543.363 kb on + strand at 3543.437 kb on + strand at 3543.439 kb on + strand at 3543.440 kb on - strand at 3543.446 kb on - strand at 3543.448 kb on - strand at 3543.547 kb on - strand at 3543.547 kb on - strand at 3543.574 kb on - strand at 3543.655 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction SP remove 3,541,410 - +1.7 3,541,463 - -1.0 3,541,470 + +0.5 3,541,488 - +0.3 3,541,572 - +1.2 3,541,589 + -2.7 3,541,590 - +0.4 3,541,597 + -2.7 3,541,597 + -1.0 3,541,598 - -1.8 3,541,602 - -1.4 3,541,611 - -0.0 3,541,625 + -1.4 3,541,669 - -0.5 3,541,789 + OHPLBJKB_03383 0.79 +0.4 3,541,789 + OHPLBJKB_03383 0.79 -0.0 3,541,790 - OHPLBJKB_03383 0.80 +0.1 3,541,790 - OHPLBJKB_03383 0.80 -0.5 3,541,791 + OHPLBJKB_03383 0.81 +1.5 3,541,791 + OHPLBJKB_03383 0.81 -0.2 3,541,811 + -0.2 3,541,887 + -0.7 3,541,890 - +3.2 3,541,892 - -0.6 3,542,017 - OHPLBJKB_03384 0.77 -0.8 3,542,073 + +2.9 3,542,130 - +1.4 3,542,154 - +0.1 3,542,313 + -1.8 3,542,364 + +0.2 3,542,365 - -2.2 3,542,365 - -0.7 3,542,432 + OHPLBJKB_03385 0.12 -0.6 3,542,432 + OHPLBJKB_03385 0.12 +0.1 3,542,432 + OHPLBJKB_03385 0.12 -0.7 3,542,433 - OHPLBJKB_03385 0.12 +0.2 3,542,433 - OHPLBJKB_03385 0.12 -1.0 3,542,433 - OHPLBJKB_03385 0.12 -1.2 3,542,433 - OHPLBJKB_03385 0.12 -0.3 3,542,433 - OHPLBJKB_03385 0.12 -1.0 3,542,456 + OHPLBJKB_03385 0.21 -1.9 3,542,466 + OHPLBJKB_03385 0.25 -1.1 3,542,466 + OHPLBJKB_03385 0.25 +0.4 3,542,471 + OHPLBJKB_03385 0.27 -0.3 3,542,521 + OHPLBJKB_03385 0.45 +0.5 3,542,527 - OHPLBJKB_03385 0.48 +0.1 3,542,532 + OHPLBJKB_03385 0.49 -2.0 3,542,533 - OHPLBJKB_03385 0.50 -0.9 3,542,533 - OHPLBJKB_03385 0.50 +0.3 3,542,571 + OHPLBJKB_03385 0.64 -0.9 3,542,572 - OHPLBJKB_03385 0.64 +0.3 3,542,677 + -0.1 3,542,744 + OHPLBJKB_03386 0.55 -0.1 3,542,744 + OHPLBJKB_03386 0.55 +2.7 3,542,745 - OHPLBJKB_03386 0.56 -0.3 3,542,745 - OHPLBJKB_03386 0.56 +1.0 3,542,745 - OHPLBJKB_03386 0.56 -1.5 3,542,745 - OHPLBJKB_03386 0.56 -2.3 3,542,773 + OHPLBJKB_03386 0.76 +0.4 3,542,830 + -1.6 3,542,874 + -0.9 3,542,874 + +0.0 3,542,874 + -0.4 3,542,875 - +0.1 3,542,875 - -2.0 3,542,877 - +3.7 3,542,905 + +2.1 3,542,966 + -1.1 3,542,998 + -0.3 3,542,999 - -1.4 3,542,999 - -1.4 3,543,084 + +1.0 3,543,085 - +0.4 3,543,092 + -0.3 3,543,093 - -2.2 3,543,101 + -0.4 3,543,101 + -0.7 3,543,102 - -0.7 3,543,113 + -0.1 3,543,114 - -1.4 3,543,114 - +2.4 3,543,116 + -1.4 3,543,117 - +0.7 3,543,122 - -0.9 3,543,190 + -0.9 3,543,190 + -0.4 3,543,191 - +0.4 3,543,209 - -2.4 3,543,209 - -2.6 3,543,270 + -0.6 3,543,316 + -0.9 3,543,316 + +0.3 3,543,316 + +0.4 3,543,316 + -0.5 3,543,316 + -0.7 3,543,316 + -1.7 3,543,316 + -1.0 3,543,316 + +0.5 3,543,317 - +0.4 3,543,317 - +2.4 3,543,317 - -0.7 3,543,317 - +0.8 3,543,317 - -3.2 3,543,320 + +0.6 3,543,320 + -0.1 3,543,321 - -1.1 3,543,321 - -1.8 3,543,345 + -0.4 3,543,346 - +0.9 3,543,361 + -1.7 3,543,363 + -2.1 3,543,437 + +0.1 3,543,439 + +1.2 3,543,440 - -0.6 3,543,446 - +0.5 3,543,448 - -0.2 3,543,547 - +0.0 3,543,547 - +0.3 3,543,574 - -0.9 3,543,655 + +2.0
Or see this region's nucleotide sequence