Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15425

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,370,135	+		LRK53_RS15420	0.35	-0.3
3,370,135	+		LRK53_RS15420	0.35	+0.0
3,370,135	+		LRK53_RS15420	0.35	-0.6
3,370,136	-		LRK53_RS15420	0.35	+1.4
3,370,136	-		LRK53_RS15420	0.35	-1.0
3,370,136	-		LRK53_RS15420	0.35	-1.4
3,370,136	-		LRK53_RS15420	0.35	-0.8
3,370,136	-		LRK53_RS15420	0.35	-0.6
3,370,147	+		LRK53_RS15420	0.36	-1.0
3,370,147	+		LRK53_RS15420	0.36	-2.0
3,370,147	+		LRK53_RS15420	0.36	-0.2
3,370,147	+		LRK53_RS15420	0.36	-0.8
3,370,148	-		LRK53_RS15420	0.36	+2.6
3,370,148	-		LRK53_RS15420	0.36	+1.3
3,370,148	-		LRK53_RS15420	0.36	-0.1
3,370,148	-		LRK53_RS15420	0.36	-1.0
3,370,148	-		LRK53_RS15420	0.36	-0.6
3,370,148	-		LRK53_RS15420	0.36	-1.3
3,370,148	-		LRK53_RS15420	0.36	-0.1
3,370,148	-		LRK53_RS15420	0.36	-0.6
3,370,148	-		LRK53_RS15420	0.36	-1.1
3,370,148	-		LRK53_RS15420	0.36	-0.3
3,370,187	+		LRK53_RS15420	0.39	+0.7
3,370,187	+		LRK53_RS15420	0.39	-1.8
3,370,188	-		LRK53_RS15420	0.39	+2.6
3,370,188	-		LRK53_RS15420	0.39	+0.0
3,370,188	-		LRK53_RS15420	0.39	-0.1
3,370,381	+		LRK53_RS15420	0.51	+0.4
3,370,381	+		LRK53_RS15420	0.51	+0.0
3,370,381	+		LRK53_RS15420	0.51	-0.8
3,370,381	+		LRK53_RS15420	0.51	-0.6
3,370,381	+		LRK53_RS15420	0.51	-0.6
3,370,381	+		LRK53_RS15420	0.51	+0.4
3,370,381	+		LRK53_RS15420	0.51	+0.4
3,370,381	+		LRK53_RS15420	0.51	+0.0
3,370,382	-		LRK53_RS15420	0.51	-0.4
3,370,382	-		LRK53_RS15420	0.51	-0.2
3,370,382	-		LRK53_RS15420	0.51	+0.4
3,370,382	-		LRK53_RS15420	0.51	-0.5
3,370,382	-		LRK53_RS15420	0.51	-2.0
3,370,382	-		LRK53_RS15420	0.51	+0.5
3,370,382	-		LRK53_RS15420	0.51	+0.0
3,370,382	-		LRK53_RS15420	0.51	-1.2
3,370,382	-		LRK53_RS15420	0.51	+2.4
3,370,419	+		LRK53_RS15420	0.54	+2.6
3,370,507	+		LRK53_RS15420	0.59	+1.3
3,370,507	+		LRK53_RS15420	0.59	-1.3
3,370,507	+		LRK53_RS15420	0.59	-2.3
3,370,507	+		LRK53_RS15420	0.59	-0.6
3,370,507	+		LRK53_RS15420	0.59	+0.9
3,370,508	-		LRK53_RS15420	0.59	-1.6
3,370,508	-		LRK53_RS15420	0.59	+0.4
3,370,508	-		LRK53_RS15420	0.59	+0.0
3,370,508	-		LRK53_RS15420	0.59	-0.2
3,370,508	-		LRK53_RS15420	0.59	-1.1
3,370,523	-		LRK53_RS15420	0.60	+0.4
3,370,528	+		LRK53_RS15420	0.61	-2.0
3,370,529	-		LRK53_RS15420	0.61	+0.0
3,370,628	+		LRK53_RS15420	0.67	-2.3
3,370,672	+		LRK53_RS15420	0.70	-0.7
3,370,672	+		LRK53_RS15420	0.70	+0.0
3,370,672	+		LRK53_RS15420	0.70	-0.9
3,370,673	-		LRK53_RS15420	0.70	+0.0
3,370,673	-		LRK53_RS15420	0.70	+0.5
3,370,673	-		LRK53_RS15420	0.70	+0.8
3,370,673	-		LRK53_RS15420	0.70	-0.3
3,370,774	+		LRK53_RS15420	0.77	-0.6
3,370,774	+		LRK53_RS15420	0.77	-0.6
3,370,774	+		LRK53_RS15420	0.77	-0.3
3,370,775	-		LRK53_RS15420	0.77	+1.7
3,370,775	-		LRK53_RS15420	0.77	-0.4
3,370,775	-		LRK53_RS15420	0.77	-1.4
3,370,775	-		LRK53_RS15420	0.77	-0.3
3,370,775	-		LRK53_RS15420	0.77	-1.2
3,370,775	-		LRK53_RS15420	0.77	+1.0
3,370,775	-		LRK53_RS15420	0.77	-2.1
3,370,780	+		LRK53_RS15420	0.77	+0.3
3,370,781	-		LRK53_RS15420	0.77	-0.1
3,370,781	-		LRK53_RS15420	0.77	+3.0
3,370,781	-		LRK53_RS15420	0.77	-1.7
3,370,795	+		LRK53_RS15420	0.78	-2.0
3,370,795	+		LRK53_RS15420	0.78	-0.8
3,370,796	-		LRK53_RS15420	0.78	-0.1
3,370,796	-		LRK53_RS15420	0.78	+0.0
3,370,915	+		LRK53_RS15420	0.86	-0.2
3,370,915	+		LRK53_RS15420	0.86	-1.6
3,370,915	+		LRK53_RS15420	0.86	-0.4
3,370,915	+		LRK53_RS15420	0.86	-2.1
3,370,915	+		LRK53_RS15420	0.86	+0.0
3,370,915	+		LRK53_RS15420	0.86	-0.4
3,370,915	+		LRK53_RS15420	0.86	-2.4
3,370,915	+		LRK53_RS15420	0.86	+0.4
3,370,915	+		LRK53_RS15420	0.86	+0.4
3,370,915	+		LRK53_RS15420	0.86	-0.2
3,370,915	+		LRK53_RS15420	0.86	-2.0
3,370,915	+		LRK53_RS15420	0.86	-0.8
3,370,915	+		LRK53_RS15420	0.86	+0.1
3,370,916	-		LRK53_RS15420	0.86	-1.1
3,370,916	-		LRK53_RS15420	0.86	-0.8
3,370,916	-		LRK53_RS15420	0.86	-1.2
3,370,916	-		LRK53_RS15420	0.86	+0.4
3,371,134	+				-0.8
3,371,134	+				-1.1
3,371,134	+				+0.6
3,371,134	+				+1.6
3,371,134	+				+0.2
3,371,134	+				-1.0
3,371,134	+				+1.0
3,371,135	-				+0.4
3,371,135	-				-0.4
3,371,135	-				+0.0
3,371,135	-				-0.4
3,371,135	-				-1.8
3,371,135	-				+0.0
3,371,135	-				-0.9
3,371,165	-				-0.9
3,371,173	+				+1.6
3,371,173	+				-1.6
3,371,173	+				+0.0
3,371,173	+				-0.8
3,371,173	+				-0.4
3,371,173	+				-0.2
3,371,173	+				-1.2
3,371,173	+				-0.6
3,371,173	+				-0.0
3,371,173	+				+0.5
3,371,173	+				-0.2
3,371,174	-				-0.8
3,371,174	-				-0.0
3,371,174	-				+0.4
3,371,174	-				+0.4
3,371,174	-				-1.0
3,371,176	+				-1.6
3,371,176	+				-0.4
3,371,176	+				-0.8
3,371,176	+				-0.6
3,371,176	+				+0.0
3,371,176	+				-0.4
3,371,176	+				-1.8
3,371,176	+				+0.4
3,371,176	+				-0.6
3,371,176	+				+0.0
3,371,176	+				-1.8
3,371,176	+				-1.0
3,371,176	+				-0.6
3,371,176	+				-0.6
3,371,176	+				-2.3
3,371,176	+				-1.0
3,371,176	+				-0.7
3,371,176	+				-0.7
3,371,176	+				-0.2
3,371,177	-				-0.3
3,371,177	-				+0.2
3,371,177	-				-0.6
3,371,177	-				-0.3
3,371,177	-				+1.4
3,371,177	-				-0.3
3,371,177	-				+0.2
3,371,177	-				-1.6
3,371,177	-				-2.6
3,371,177	-				-1.3
3,371,177	-				-0.5
3,371,177	-				+0.0
3,371,177	-				-0.2
3,371,177	-				-1.3
3,371,177	-				-1.7
3,371,177	-				-0.1
3,371,185	+				-2.4
3,371,185	+				+0.8
3,371,185	+				-1.6
3,371,185	+				-1.1
3,371,185	+				-1.0
3,371,185	+				+0.2
3,371,185	+				+1.2
3,371,185	+				+2.0
3,371,185	+				-0.1
3,371,185	+				+0.0
3,371,186	-				+1.0
3,371,186	-				-0.4
3,371,186	-				+0.3
3,371,186	-				+1.3
3,371,186	-				-2.8
3,371,186	-				+1.0
3,371,186	-				-0.3
3,371,186	-				+1.8
3,371,186	-				-1.6
3,371,188	+				-0.6
3,371,188	+				-0.3
3,371,188	+				-1.1
3,371,188	+				-0.8
3,371,188	+				-1.2
3,371,188	+				-1.7
3,371,188	+				-0.6
3,371,188	+				-0.9
3,371,188	+				+0.8
3,371,188	+				-0.7
3,371,189	-				+0.4
3,371,189	-				+0.5
3,371,189	-				+0.6
3,371,189	-				-0.5
3,371,189	-				+0.0
3,371,189	-				+1.0
3,371,189	-				-1.7
3,371,189	-				-0.3
3,371,236	+		LRK53_RS15425	0.11	+2.0
3,371,236	+		LRK53_RS15425	0.11	-1.6
3,371,236	+		LRK53_RS15425	0.11	-0.6
3,371,236	+		LRK53_RS15425	0.11	-0.2
3,371,236	+		LRK53_RS15425	0.11	-0.9
3,371,236	+		LRK53_RS15425	0.11	+0.4
3,371,236	+		LRK53_RS15425	0.11	-1.1
3,371,236	+		LRK53_RS15425	0.11	+2.6
3,371,237	-		LRK53_RS15425	0.11	-0.4
3,371,237	-		LRK53_RS15425	0.11	+0.0
3,371,237	-		LRK53_RS15425	0.11	-0.5
3,371,237	-		LRK53_RS15425	0.11	-3.1
3,371,237	-		LRK53_RS15425	0.11	-2.3
3,371,237	-		LRK53_RS15425	0.11	+0.0
3,371,502	+		LRK53_RS15425	0.40	+0.4
3,371,502	+		LRK53_RS15425	0.40	+0.9
3,371,503	-		LRK53_RS15425	0.41	+0.5
3,371,503	-		LRK53_RS15425	0.41	+1.0
3,371,503	-		LRK53_RS15425	0.41	+0.6
3,371,503	-		LRK53_RS15425	0.41	-0.7
3,371,600	+		LRK53_RS15425	0.51	-1.0
3,371,613	+		LRK53_RS15425	0.53	-0.7
3,371,613	+		LRK53_RS15425	0.53	-0.1
3,371,613	+		LRK53_RS15425	0.53	+0.9
3,371,614	-		LRK53_RS15425	0.53	-2.0
3,371,614	-		LRK53_RS15425	0.53	+1.8
3,371,614	-		LRK53_RS15425	0.53	+0.0
3,371,615	+		LRK53_RS15425	0.53	-0.5
3,371,615	+		LRK53_RS15425	0.53	+1.5
3,371,616	-		LRK53_RS15425	0.53	+1.6
3,371,616	-		LRK53_RS15425	0.53	-1.1
3,372,222	+		LRK53_RS15430	0.11	+0.4
3,372,222	+		LRK53_RS15430	0.11	-1.1
3,372,222	+		LRK53_RS15430	0.11	+0.3
3,372,222	+		LRK53_RS15430	0.11	-1.3
3,372,223	-		LRK53_RS15430	0.11	-0.6
3,372,223	-		LRK53_RS15430	0.11	-1.3
3,372,223	-		LRK53_RS15430	0.11	-1.3
3,372,223	-		LRK53_RS15430	0.11	-0.3
3,372,223	-		LRK53_RS15430	0.11	-0.3
3,372,285	+		LRK53_RS15430	0.15	-0.4
3,372,286	-		LRK53_RS15430	0.15	-0.8
3,372,286	-		LRK53_RS15430	0.15	-1.4
3,372,286	-		LRK53_RS15430	0.15	-0.6
3,372,286	-		LRK53_RS15430	0.15	-0.3
3,372,286	-		LRK53_RS15430	0.15	+1.0
3,372,286	-		LRK53_RS15430	0.15	-0.6
3,372,332	+		LRK53_RS15430	0.18	+1.4
3,372,332	+		LRK53_RS15430	0.18	+0.4
3,372,332	+		LRK53_RS15430	0.18	-1.0
3,372,332	+		LRK53_RS15430	0.18	-1.0
3,372,333	-		LRK53_RS15430	0.18	-0.8
3,372,333	-		LRK53_RS15430	0.18	-1.3
3,372,471	+		LRK53_RS15430	0.27	+0.0
3,372,471	+		LRK53_RS15430	0.27	+0.0
3,372,471	+		LRK53_RS15430	0.27	+1.0
3,372,471	+		LRK53_RS15430	0.27	-3.1
3,372,472	-		LRK53_RS15430	0.27	+1.0
3,372,472	-		LRK53_RS15430	0.27	-0.4
3,372,484	+		LRK53_RS15430	0.28	-2.4
3,372,492	+		LRK53_RS15430	0.28	-0.6
3,372,492	+		LRK53_RS15430	0.28	-0.8
3,372,492	+		LRK53_RS15430	0.28	-1.1
3,372,492	+		LRK53_RS15430	0.28	-1.3
3,372,492	+		LRK53_RS15430	0.28	+0.0
3,372,492	+		LRK53_RS15430	0.28	-0.6
3,372,492	+		LRK53_RS15430	0.28	+0.0
3,372,492	+		LRK53_RS15430	0.28	-0.6
3,372,493	-		LRK53_RS15430	0.28	+0.2
3,372,493	-		LRK53_RS15430	0.28	+2.0
3,372,624	+		LRK53_RS15430	0.37	+1.2
3,372,624	+		LRK53_RS15430	0.37	+1.0
3,372,624	+		LRK53_RS15430	0.37	+0.0
3,372,624	+		LRK53_RS15430	0.37	+0.1
3,372,624	+		LRK53_RS15430	0.37	-1.1
3,372,624	+		LRK53_RS15430	0.37	-0.4
3,372,624	+		LRK53_RS15430	0.37	-0.4
3,372,624	+		LRK53_RS15430	0.37	+1.0
3,372,624	+		LRK53_RS15430	0.37	-0.3
3,372,624	+		LRK53_RS15430	0.37	+2.6
3,372,625	-		LRK53_RS15430	0.37	-0.1
3,372,625	-		LRK53_RS15430	0.37	-1.5
3,372,625	-		LRK53_RS15430	0.37	-2.7
3,372,625	-		LRK53_RS15430	0.37	+0.9
3,372,625	-		LRK53_RS15430	0.37	+0.0
3,372,625	-		LRK53_RS15430	0.37	-0.3
3,372,625	-		LRK53_RS15430	0.37	+2.6
3,372,625	-		LRK53_RS15430	0.37	+0.3
3,372,625	-		LRK53_RS15430	0.37	+0.1
3,372,625	-		LRK53_RS15430	0.37	+0.7
3,372,625	-		LRK53_RS15430	0.37	+0.0
3,372,625	-		LRK53_RS15430	0.37	+1.4
3,372,625	-		LRK53_RS15430	0.37	-0.7
3,372,625	-		LRK53_RS15430	0.37	+0.0
3,372,625	-		LRK53_RS15430	0.37	-2.0
3,372,625	-		LRK53_RS15430	0.37	+1.0
3,372,625	-		LRK53_RS15430	0.37	-0.6
3,372,625	-		LRK53_RS15430	0.37	+0.0
3,372,649	-		LRK53_RS15430	0.38	-1.6
3,372,766	-		LRK53_RS15430	0.46	-1.9
3,372,775	+		LRK53_RS15430	0.46	+1.4
3,372,775	+		LRK53_RS15430	0.46	-0.7
3,372,775	+		LRK53_RS15430	0.46	+1.0
3,372,775	+		LRK53_RS15430	0.46	-0.1
3,372,775	+		LRK53_RS15430	0.46	-1.8
3,372,776	-		LRK53_RS15430	0.46	-0.1
3,372,776	-		LRK53_RS15430	0.46	-0.2
3,372,776	-		LRK53_RS15430	0.46	-0.4
3,372,776	-		LRK53_RS15430	0.46	-0.2
3,372,776	-		LRK53_RS15430	0.46	+0.2
3,372,776	-		LRK53_RS15430	0.46	+1.0
3,372,776	-		LRK53_RS15430	0.46	+0.0
3,372,776	-		LRK53_RS15430	0.46	+0.8
3,372,776	-		LRK53_RS15430	0.46	-2.1
3,372,777	+		LRK53_RS15430	0.46	-1.3
3,372,777	+		LRK53_RS15430	0.46	+1.0
3,372,777	+		LRK53_RS15430	0.46	-0.5
3,372,777	+		LRK53_RS15430	0.46	+0.3
3,372,777	+		LRK53_RS15430	0.46	+0.4
3,372,778	-		LRK53_RS15430	0.46	-0.3
3,372,778	-		LRK53_RS15430	0.46	+1.9
3,372,778	-		LRK53_RS15430	0.46	-0.8
3,372,810	+		LRK53_RS15430	0.48	-0.9
3,372,810	+		LRK53_RS15430	0.48	+0.0
3,372,810	+		LRK53_RS15430	0.48	-1.3
3,372,811	-		LRK53_RS15430	0.48	-0.2
3,372,811	-		LRK53_RS15430	0.48	+1.6
3,372,811	-		LRK53_RS15430	0.48	+0.0
3,372,811	-		LRK53_RS15430	0.48	-1.8
3,372,811	-		LRK53_RS15430	0.48	-0.8
3,372,928	+		LRK53_RS15430	0.56	-1.6
3,372,928	+		LRK53_RS15430	0.56	+1.0
3,372,929	-		LRK53_RS15430	0.56	+1.0
3,372,929	-		LRK53_RS15430	0.56	-0.0
3,372,929	-		LRK53_RS15430	0.56	-1.4
3,372,933	+		LRK53_RS15430	0.56	-1.8
3,372,933	+		LRK53_RS15430	0.56	+0.4
3,372,933	+		LRK53_RS15430	0.56	+0.4
3,372,934	-		LRK53_RS15430	0.56	+1.0
3,372,934	-		LRK53_RS15430	0.56	-2.0
3,372,934	-		LRK53_RS15430	0.56	+1.7
3,372,934	-		LRK53_RS15430	0.56	+0.5
3,372,934	-		LRK53_RS15430	0.56	-0.3
3,372,934	-		LRK53_RS15430	0.56	+0.6
3,372,987	+		LRK53_RS15430	0.59	-1.6
3,372,987	+		LRK53_RS15430	0.59	-1.2
3,372,987	+		LRK53_RS15430	0.59	+0.0
3,373,010	+		LRK53_RS15430	0.61	+0.4
3,373,010	+		LRK53_RS15430	0.61	+0.3
3,373,010	+		LRK53_RS15430	0.61	-0.2
3,373,010	+		LRK53_RS15430	0.61	-0.6
3,373,010	+		LRK53_RS15430	0.61	-1.9
3,373,011	-		LRK53_RS15430	0.61	+0.1
3,373,011	-		LRK53_RS15430	0.61	-0.8
3,373,011	-		LRK53_RS15430	0.61	-1.0
3,373,011	-		LRK53_RS15430	0.61	-0.6
3,373,011	-		LRK53_RS15430	0.61	-2.1
3,373,011	-		LRK53_RS15430	0.61	+0.4
3,373,011	-		LRK53_RS15430	0.61	-2.6
3,373,011	-		LRK53_RS15430	0.61	+0.0
3,373,011	-		LRK53_RS15430	0.61	-1.6
3,373,014	+		LRK53_RS15430	0.61	+0.1
3,373,014	+		LRK53_RS15430	0.61	+1.0
3,373,014	+		LRK53_RS15430	0.61	-0.2
3,373,014	+		LRK53_RS15430	0.61	-0.2
3,373,014	+		LRK53_RS15430	0.61	+0.0
3,373,014	+		LRK53_RS15430	0.61	-2.6
3,373,014	+		LRK53_RS15430	0.61	-1.3
3,373,014	+		LRK53_RS15430	0.61	-0.2
3,373,015	-		LRK53_RS15430	0.61	+0.2
3,373,015	-		LRK53_RS15430	0.61	+1.0
3,373,015	-		LRK53_RS15430	0.61	+1.0
3,373,015	-		LRK53_RS15430	0.61	+0.0