Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17080

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,754,342	+		LRK53_RS17075	0.22	+0.5
3,754,342	+		LRK53_RS17075	0.22	-1.3
3,754,342	+		LRK53_RS17075	0.22	-0.1
3,754,342	+		LRK53_RS17075	0.22	+0.1
3,754,342	+		LRK53_RS17075	0.22	+0.3
3,754,342	+		LRK53_RS17075	0.22	+0.1
3,754,342	+		LRK53_RS17075	0.22	-0.2
3,754,342	+		LRK53_RS17075	0.22	+0.8
3,754,342	+		LRK53_RS17075	0.22	-0.5
3,754,342	+		LRK53_RS17075	0.22	+0.0
3,754,342	+		LRK53_RS17075	0.22	+0.6
3,754,342	+		LRK53_RS17075	0.22	-0.2
3,754,342	+		LRK53_RS17075	0.22	+2.3
3,754,342	+		LRK53_RS17075	0.22	-2.7
3,754,342	+		LRK53_RS17075	0.22	-1.2
3,754,342	+		LRK53_RS17075	0.22	-1.3
3,754,342	+		LRK53_RS17075	0.22	+0.7
3,754,342	+		LRK53_RS17075	0.22	-0.5
3,754,342	+		LRK53_RS17075	0.22	-1.6
3,754,342	+		LRK53_RS17075	0.22	-1.0
3,754,342	+		LRK53_RS17075	0.22	+1.3
3,754,342	+		LRK53_RS17075	0.22	-1.0
3,754,343	-		LRK53_RS17075	0.22	-2.0
3,754,343	-		LRK53_RS17075	0.22	-0.2
3,754,343	-		LRK53_RS17075	0.22	-0.0
3,754,343	-		LRK53_RS17075	0.22	+1.3
3,754,343	-		LRK53_RS17075	0.22	-0.2
3,754,343	-		LRK53_RS17075	0.22	-0.3
3,754,343	-		LRK53_RS17075	0.22	-0.7
3,754,343	-		LRK53_RS17075	0.22	-2.5
3,754,343	-		LRK53_RS17075	0.22	+1.6
3,754,343	-		LRK53_RS17075	0.22	-0.1
3,754,343	-		LRK53_RS17075	0.22	+0.3
3,754,343	-		LRK53_RS17075	0.22	-1.2
3,754,343	-		LRK53_RS17075	0.22	+0.8
3,754,343	-		LRK53_RS17075	0.22	+0.9
3,754,343	-		LRK53_RS17075	0.22	-0.8
3,754,343	-		LRK53_RS17075	0.22	-0.6
3,754,343	-		LRK53_RS17075	0.22	-2.0
3,754,343	-		LRK53_RS17075	0.22	-0.5
3,754,800	+		LRK53_RS17075	0.63	+2.1
3,754,879	+		LRK53_RS17075	0.70	+0.0
3,755,258	+				-0.7
3,755,258	+				+0.3
3,755,258	+				-1.0
3,755,258	+				-0.5
3,755,258	+				-2.6
3,755,258	+				-0.6
3,755,258	+				-0.9
3,755,258	+				-0.4
3,755,258	+				-0.2
3,755,258	+				-1.2
3,755,259	-				+1.3
3,755,259	-				+1.0
3,755,259	-				+0.3
3,755,259	-				+0.6
3,755,259	-				+1.3
3,755,448	-		LRK53_RS17080	0.11	+2.3
3,755,448	-		LRK53_RS17080	0.11	-1.0
3,755,448	-		LRK53_RS17080	0.11	+0.7
3,755,477	+		LRK53_RS17080	0.12	+0.4
3,755,478	-		LRK53_RS17080	0.12	-1.8
3,755,478	-		LRK53_RS17080	0.12	-0.7
3,755,486	+		LRK53_RS17080	0.13	+0.5
3,755,487	-		LRK53_RS17080	0.13	+0.3
3,755,487	-		LRK53_RS17080	0.13	-0.7
3,755,498	+		LRK53_RS17080	0.14	+1.1
3,755,498	+		LRK53_RS17080	0.14	-0.7
3,755,498	+		LRK53_RS17080	0.14	-1.7
3,755,498	+		LRK53_RS17080	0.14	-0.7
3,755,498	+		LRK53_RS17080	0.14	+1.9
3,755,498	+		LRK53_RS17080	0.14	-0.2
3,755,498	+		LRK53_RS17080	0.14	-0.4
3,755,498	+		LRK53_RS17080	0.14	-1.0
3,755,498	+		LRK53_RS17080	0.14	+0.7
3,755,498	+		LRK53_RS17080	0.14	-0.5
3,755,498	+		LRK53_RS17080	0.14	+1.3
3,755,499	-		LRK53_RS17080	0.14	+0.5
3,755,499	-		LRK53_RS17080	0.14	+0.8
3,755,499	-		LRK53_RS17080	0.14	-1.2
3,755,499	-		LRK53_RS17080	0.14	-0.6
3,755,595	+		LRK53_RS17080	0.19	-1.7
3,755,636	+		LRK53_RS17080	0.21	-0.6
3,755,637	-		LRK53_RS17080	0.21	-0.7
3,755,657	+		LRK53_RS17080	0.22	-1.4
3,755,657	+		LRK53_RS17080	0.22	-0.7
3,755,658	-		LRK53_RS17080	0.23	-0.6
3,755,658	-		LRK53_RS17080	0.23	-1.2
3,755,658	-		LRK53_RS17080	0.23	-1.0
3,756,237	+		LRK53_RS17080	0.55	-1.5
3,756,237	+		LRK53_RS17080	0.55	-1.7
3,756,238	-		LRK53_RS17080	0.55	-0.2
3,756,238	-		LRK53_RS17080	0.55	+0.3
3,756,238	-		LRK53_RS17080	0.55	-1.0
3,756,238	-		LRK53_RS17080	0.55	-1.1
3,756,238	-		LRK53_RS17080	0.55	-0.4
3,756,238	-		LRK53_RS17080	0.55	-1.0
3,756,341	+		LRK53_RS17080	0.61	-1.6
3,756,342	-		LRK53_RS17080	0.61	+0.5
3,756,374	+		LRK53_RS17080	0.63	-1.2
3,756,374	+		LRK53_RS17080	0.63	-0.2
3,756,374	+		LRK53_RS17080	0.63	+0.3
3,756,374	+		LRK53_RS17080	0.63	-2.0
3,756,374	+		LRK53_RS17080	0.63	+0.3
3,756,374	+		LRK53_RS17080	0.63	+1.3
3,756,374	+		LRK53_RS17080	0.63	+1.3
3,756,374	+		LRK53_RS17080	0.63	+0.9
3,756,374	+		LRK53_RS17080	0.63	-0.9
3,756,374	+		LRK53_RS17080	0.63	-0.2
3,756,374	+		LRK53_RS17080	0.63	-0.4
3,756,374	+		LRK53_RS17080	0.63	-2.1
3,756,375	-		LRK53_RS17080	0.63	+2.3
3,756,375	-		LRK53_RS17080	0.63	-0.7
3,756,375	-		LRK53_RS17080	0.63	+0.6
3,756,375	-		LRK53_RS17080	0.63	+0.3
3,756,380	+		LRK53_RS17080	0.63	-1.6
3,756,380	+		LRK53_RS17080	0.63	-0.2
3,756,380	+		LRK53_RS17080	0.63	-0.8
3,756,380	+		LRK53_RS17080	0.63	-0.5
3,756,380	+		LRK53_RS17080	0.63	-0.0
3,756,380	+		LRK53_RS17080	0.63	+0.6
3,756,380	+		LRK53_RS17080	0.63	+1.6
3,756,380	+		LRK53_RS17080	0.63	-0.7
3,756,380	+		LRK53_RS17080	0.63	-0.3
3,756,380	+		LRK53_RS17080	0.63	+0.8
3,756,380	+		LRK53_RS17080	0.63	+0.3
3,756,380	+		LRK53_RS17080	0.63	-0.5
3,756,380	+		LRK53_RS17080	0.63	-2.2
3,756,380	+		LRK53_RS17080	0.63	-1.0
3,756,380	+		LRK53_RS17080	0.63	-1.0
3,756,380	+		LRK53_RS17080	0.63	-0.4
3,756,380	+		LRK53_RS17080	0.63	-2.1
3,756,380	+		LRK53_RS17080	0.63	-2.1
3,756,380	+		LRK53_RS17080	0.63	+1.3
3,756,381	-		LRK53_RS17080	0.63	-0.9
3,756,381	-		LRK53_RS17080	0.63	-0.6
3,756,381	-		LRK53_RS17080	0.63	+0.3
3,756,381	-		LRK53_RS17080	0.63	+0.3
3,756,381	-		LRK53_RS17080	0.63	-0.9
3,756,381	-		LRK53_RS17080	0.63	-0.8
3,756,381	-		LRK53_RS17080	0.63	+2.9
3,756,381	-		LRK53_RS17080	0.63	-2.6
3,756,381	-		LRK53_RS17080	0.63	+0.3
3,756,381	-		LRK53_RS17080	0.63	-1.2
3,756,381	-		LRK53_RS17080	0.63	-1.8
3,756,381	-		LRK53_RS17080	0.63	+0.0
3,756,381	-		LRK53_RS17080	0.63	-1.5
3,756,381	-		LRK53_RS17080	0.63	+0.9
3,756,381	-		LRK53_RS17080	0.63	-1.5
3,756,401	+		LRK53_RS17080	0.64	-0.2
3,756,402	-		LRK53_RS17080	0.64	+0.8
3,756,402	-		LRK53_RS17080	0.64	-1.7
3,756,473	+		LRK53_RS17080	0.68	+0.2
3,756,474	-		LRK53_RS17080	0.68	-0.8
3,756,474	-		LRK53_RS17080	0.68	-0.5
3,756,474	-		LRK53_RS17080	0.68	+0.3
3,756,474	-		LRK53_RS17080	0.68	-0.2
3,756,476	+		LRK53_RS17080	0.68	+0.2
3,756,476	+		LRK53_RS17080	0.68	-0.3
3,756,476	+		LRK53_RS17080	0.68	-1.5
3,756,476	+		LRK53_RS17080	0.68	-0.7
3,756,476	+		LRK53_RS17080	0.68	-2.1
3,756,476	+		LRK53_RS17080	0.68	-1.2
3,756,476	+		LRK53_RS17080	0.68	-1.0
3,756,476	+		LRK53_RS17080	0.68	-0.2
3,756,477	-		LRK53_RS17080	0.68	+0.5
3,756,477	-		LRK53_RS17080	0.68	-1.0
3,756,477	-		LRK53_RS17080	0.68	-1.7
3,756,477	-		LRK53_RS17080	0.68	-1.7
3,756,477	-		LRK53_RS17080	0.68	-1.7
3,756,477	-		LRK53_RS17080	0.68	-0.7
3,756,938	+				-1.8
3,756,938	+				+0.5
3,756,938	+				+1.1
3,756,938	+				+0.8
3,756,938	+				+2.3
3,756,938	+				-0.6
3,756,938	+				+0.6
3,756,939	-				+0.3
3,756,939	-				+0.5
3,756,939	-				-0.8
3,756,939	-				-0.2
3,756,939	-				-1.0
3,756,939	-				-0.0
3,756,939	-				+0.8
3,756,939	-				-1.7
3,756,939	-				-1.4
3,756,939	-				+1.3
3,756,939	-				-0.2
3,756,939	-				+1.5
3,756,939	-				-0.1
3,756,939	-				+0.3
3,756,939	-				+0.1
3,756,940	+				-1.2
3,756,940	+				-0.2
3,756,940	+				-0.4
3,756,940	+				-0.7
3,756,940	+				+1.3
3,756,940	+				+0.3
3,756,940	+				-1.0
3,756,940	+				-1.8
3,756,940	+				-2.0
3,756,940	+				-0.9
3,756,940	+				+1.3
3,756,940	+				-2.6
3,756,940	+				-0.2
3,756,940	+				-0.5
3,756,940	+				+0.0
3,756,940	+				-1.0
3,756,940	+				+1.7
3,756,940	+				+0.3
3,756,940	+				-1.0
3,756,941	-				+0.1
3,756,941	-				-1.7
3,756,941	-				+0.1
3,756,941	-				-1.1
3,756,941	-				-1.0
3,756,941	-				-2.0
3,756,941	-				+0.3
3,756,941	-				+0.2
3,756,941	-				-0.5
3,756,941	-				-2.0
3,756,941	-				-1.7
3,756,941	-				-0.2
3,756,941	-				+0.2
3,756,941	-				-0.1
3,756,941	-				+2.7
3,756,941	-				-0.5
3,756,941	-				-0.5
3,756,941	-				+0.1
3,756,941	-				+1.1
3,756,941	-				+0.7
3,756,941	-				+0.1
3,756,941	-				-0.4
3,756,941	-				-2.2
3,756,941	-				-1.6
3,756,941	-				+0.9
3,756,941	-				-1.8
3,756,941	-				-0.8
3,756,941	-				-1.2
3,756,941	-				-2.2
3,756,942	-				-1.0
3,756,945	+				+1.6
3,756,945	+				-0.2
3,756,945	+				+0.1
3,756,945	+				-1.7
3,756,945	+				-0.1
3,756,945	+				-1.1
3,756,945	+				+0.3
3,756,946	-				+1.3
3,756,946	-				-0.9
3,757,121	+				-1.1
3,757,328	+		LRK53_RS17085	0.14	+1.3
3,757,328	+		LRK53_RS17085	0.14	-1.2
3,757,328	+		LRK53_RS17085	0.14	-1.7
3,757,328	+		LRK53_RS17085	0.14	+0.7
3,757,329	-		LRK53_RS17085	0.14	-0.2
3,757,329	-		LRK53_RS17085	0.14	-0.8
3,757,329	-		LRK53_RS17085	0.14	+0.8
3,757,329	-		LRK53_RS17085	0.14	-0.2
3,757,329	-		LRK53_RS17085	0.14	+0.3
3,757,329	-		LRK53_RS17085	0.14	-0.8
3,757,329	-		LRK53_RS17085	0.14	-1.6
3,757,329	-		LRK53_RS17085	0.14	+3.3
3,757,329	-		LRK53_RS17085	0.14	-1.0
3,757,343	+		LRK53_RS17085	0.15	+0.2
3,757,343	+		LRK53_RS17085	0.15	-2.0
3,757,343	+		LRK53_RS17085	0.15	-1.5
3,757,343	+		LRK53_RS17085	0.15	-1.8
3,757,343	+		LRK53_RS17085	0.15	+1.7
3,757,343	+		LRK53_RS17085	0.15	-0.7
3,757,344	-		LRK53_RS17085	0.15	-0.5
3,757,344	-		LRK53_RS17085	0.15	-2.0
3,757,344	-		LRK53_RS17085	0.15	-0.2
3,757,344	-		LRK53_RS17085	0.15	+0.3
3,757,344	-		LRK53_RS17085	0.15	-2.3
3,757,434	+		LRK53_RS17085	0.21	+0.3
3,757,434	+		LRK53_RS17085	0.21	+3.7
3,757,434	+		LRK53_RS17085	0.21	-0.9
3,757,434	+		LRK53_RS17085	0.21	-2.1
3,757,434	+		LRK53_RS17085	0.21	+0.0
3,757,434	+		LRK53_RS17085	0.21	-0.7
3,757,434	+		LRK53_RS17085	0.21	+0.2
3,757,434	+		LRK53_RS17085	0.21	+0.2
3,757,434	+		LRK53_RS17085	0.21	+0.3
3,757,434	+		LRK53_RS17085	0.21	-1.1
3,757,434	+		LRK53_RS17085	0.21	-0.2
3,757,434	+		LRK53_RS17085	0.21	-0.3
3,757,435	-		LRK53_RS17085	0.21	-2.6
3,757,435	-		LRK53_RS17085	0.21	-0.6
3,757,435	-		LRK53_RS17085	0.21	-0.7
3,757,435	-		LRK53_RS17085	0.21	-0.7
3,757,435	-		LRK53_RS17085	0.21	-2.7
3,757,435	-		LRK53_RS17085	0.21	-0.3
3,757,435	-		LRK53_RS17085	0.21	+0.1
3,757,436	+		LRK53_RS17085	0.21	+0.4
3,757,436	+		LRK53_RS17085	0.21	-0.5
3,757,436	+		LRK53_RS17085	0.21	+1.5
3,757,436	+		LRK53_RS17085	0.21	+2.3
3,757,436	+		LRK53_RS17085	0.21	-0.8
3,757,436	+		LRK53_RS17085	0.21	-0.2
3,757,436	+		LRK53_RS17085	0.21	-1.0
3,757,436	+		LRK53_RS17085	0.21	+0.2
3,757,436	+		LRK53_RS17085	0.21	+1.2
3,757,436	+		LRK53_RS17085	0.21	-0.8
3,757,436	+		LRK53_RS17085	0.21	+1.3
3,757,436	+		LRK53_RS17085	0.21	+0.3
3,757,436	+		LRK53_RS17085	0.21	+1.3
3,757,436	+		LRK53_RS17085	0.21	-1.7
3,757,436	+		LRK53_RS17085	0.21	-1.0
3,757,436	+		LRK53_RS17085	0.21	-0.2
3,757,436	+		LRK53_RS17085	0.21	-0.2
3,757,436	+		LRK53_RS17085	0.21	-0.3
3,757,436	+		LRK53_RS17085	0.21	+0.6
3,757,436	+		LRK53_RS17085	0.21	-1.8
3,757,436	+		LRK53_RS17085	0.21	-0.2
3,757,436	+		LRK53_RS17085	0.21	+2.2
3,757,436	+		LRK53_RS17085	0.21	-2.5
3,757,436	+		LRK53_RS17085	0.21	-1.1
3,757,437	-		LRK53_RS17085	0.21	-1.7
3,757,437	-		LRK53_RS17085	0.21	-0.6
3,757,437	-		LRK53_RS17085	0.21	-1.4
3,757,437	-		LRK53_RS17085	0.21	+1.3
3,757,437	-		LRK53_RS17085	0.21	+0.1
3,757,437	-		LRK53_RS17085	0.21	+0.1
3,757,437	-		LRK53_RS17085	0.21	-2.4
3,757,437	-		LRK53_RS17085	0.21	-0.5
3,757,437	-		LRK53_RS17085	0.21	-0.7
3,757,437	-		LRK53_RS17085	0.21	+0.8
3,757,437	-		LRK53_RS17085	0.21	-1.0
3,757,437	-		LRK53_RS17085	0.21	-0.2
3,757,437	-		LRK53_RS17085	0.21	-0.4
3,757,437	-		LRK53_RS17085	0.21	-0.7
3,757,437	-		LRK53_RS17085	0.21	-0.5
3,757,437	-		LRK53_RS17085	0.21	-1.2
3,757,437	-		LRK53_RS17085	0.21	-1.4
3,757,437	-		LRK53_RS17085	0.21	-0.9
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