Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15540

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,405,103	+		LRK53_RS15535	0.49	-0.3
3,405,103	+		LRK53_RS15535	0.49	-0.1
3,405,103	+		LRK53_RS15535	0.49	-1.1
3,405,103	+		LRK53_RS15535	0.49	-1.0
3,405,103	+		LRK53_RS15535	0.49	-0.4
3,405,103	+		LRK53_RS15535	0.49	-1.0
3,405,103	+		LRK53_RS15535	0.49	-2.1
3,405,103	+		LRK53_RS15535	0.49	+3.4
3,405,103	+		LRK53_RS15535	0.49	-0.5
3,405,103	+		LRK53_RS15535	0.49	+1.1
3,405,103	+		LRK53_RS15535	0.49	+0.4
3,405,103	+		LRK53_RS15535	0.49	-0.5
3,405,103	+		LRK53_RS15535	0.49	+0.4
3,405,103	+		LRK53_RS15535	0.49	-1.8
3,405,103	+		LRK53_RS15535	0.49	-2.3
3,405,103	+		LRK53_RS15535	0.49	-0.7
3,405,103	+		LRK53_RS15535	0.49	+0.6
3,405,103	+		LRK53_RS15535	0.49	+1.4
3,405,103	+		LRK53_RS15535	0.49	-1.2
3,405,103	+		LRK53_RS15535	0.49	+1.7
3,405,103	+		LRK53_RS15535	0.49	-0.2
3,405,103	+		LRK53_RS15535	0.49	+0.1
3,405,103	+		LRK53_RS15535	0.49	-1.2
3,405,103	+		LRK53_RS15535	0.49	+0.4
3,405,103	+		LRK53_RS15535	0.49	-0.6
3,405,103	+		LRK53_RS15535	0.49	+2.1
3,405,103	+		LRK53_RS15535	0.49	-1.0
3,405,104	-		LRK53_RS15535	0.49	-0.3
3,405,104	-		LRK53_RS15535	0.49	-0.6
3,405,104	-		LRK53_RS15535	0.49	-1.2
3,405,104	-		LRK53_RS15535	0.49	-0.3
3,405,104	-		LRK53_RS15535	0.49	-0.2
3,405,104	-		LRK53_RS15535	0.49	-2.0
3,405,104	-		LRK53_RS15535	0.49	+0.0
3,405,104	-		LRK53_RS15535	0.49	-0.6
3,405,104	-		LRK53_RS15535	0.49	-0.3
3,405,104	-		LRK53_RS15535	0.49	+1.8
3,405,104	-		LRK53_RS15535	0.49	-2.0
3,405,104	-		LRK53_RS15535	0.49	-0.6
3,405,104	-		LRK53_RS15535	0.49	-0.5
3,405,104	-		LRK53_RS15535	0.49	-1.4
3,405,104	-		LRK53_RS15535	0.49	+1.9
3,405,104	-		LRK53_RS15535	0.49	-1.4
3,405,104	-		LRK53_RS15535	0.49	+1.4
3,405,104	-		LRK53_RS15535	0.49	+0.4
3,405,104	-		LRK53_RS15535	0.49	-0.1
3,405,104	-		LRK53_RS15535	0.49	-0.4
3,405,104	-		LRK53_RS15535	0.49	-1.0
3,405,104	-		LRK53_RS15535	0.49	-1.0
3,405,104	-		LRK53_RS15535	0.49	+1.1
3,405,104	-		LRK53_RS15535	0.49	-0.6
3,405,104	-		LRK53_RS15535	0.49	-0.4
3,405,104	-		LRK53_RS15535	0.49	-2.9
3,405,104	-		LRK53_RS15535	0.49	+0.2
3,405,104	-		LRK53_RS15535	0.49	+0.5
3,405,104	-		LRK53_RS15535	0.49	-1.6
3,405,104	-		LRK53_RS15535	0.49	-2.1
3,405,214	+		LRK53_RS15535	0.56	-0.4
3,405,214	+		LRK53_RS15535	0.56	-0.3
3,405,253	+		LRK53_RS15535	0.58	+0.5
3,405,253	+		LRK53_RS15535	0.58	-1.4
3,405,253	+		LRK53_RS15535	0.58	-0.3
3,405,253	+		LRK53_RS15535	0.58	-0.6
3,405,253	+		LRK53_RS15535	0.58	-0.2
3,405,253	+		LRK53_RS15535	0.58	-0.5
3,405,254	-		LRK53_RS15535	0.58	+0.5
3,405,254	-		LRK53_RS15535	0.58	-0.6
3,405,254	-		LRK53_RS15535	0.58	-0.7
3,405,254	-		LRK53_RS15535	0.58	-1.0
3,405,259	+		LRK53_RS15535	0.58	-1.1
3,405,260	-		LRK53_RS15535	0.58	+0.5
3,405,409	+		LRK53_RS15535	0.67	-2.4
3,405,409	+		LRK53_RS15535	0.67	-0.0
3,405,410	-		LRK53_RS15535	0.67	-2.2
3,405,410	-		LRK53_RS15535	0.67	+0.3
3,405,410	-		LRK53_RS15535	0.67	+0.8
3,405,410	-		LRK53_RS15535	0.67	+0.6
3,405,410	-		LRK53_RS15535	0.67	-0.9
3,405,410	-		LRK53_RS15535	0.67	-1.2
3,405,410	-		LRK53_RS15535	0.67	+2.1
3,405,410	-		LRK53_RS15535	0.67	-1.1
3,405,514	+		LRK53_RS15535	0.72	-2.3
3,405,514	+		LRK53_RS15535	0.72	-0.8
3,405,514	+		LRK53_RS15535	0.72	-0.8
3,405,514	+		LRK53_RS15535	0.72	+0.4
3,405,514	+		LRK53_RS15535	0.72	+0.1
3,405,514	+		LRK53_RS15535	0.72	+1.4
3,405,514	+		LRK53_RS15535	0.72	-0.4
3,405,514	+		LRK53_RS15535	0.72	-1.4
3,405,514	+		LRK53_RS15535	0.72	-0.6
3,405,514	+		LRK53_RS15535	0.72	+0.6
3,405,514	+		LRK53_RS15535	0.72	+0.0
3,405,514	+		LRK53_RS15535	0.72	-0.6
3,405,514	+		LRK53_RS15535	0.72	-0.1
3,405,514	+		LRK53_RS15535	0.72	-1.2
3,405,514	+		LRK53_RS15535	0.72	-0.2
3,405,515	-		LRK53_RS15535	0.73	-0.2
3,405,515	-		LRK53_RS15535	0.73	+0.4
3,405,515	-		LRK53_RS15535	0.73	-1.6
3,405,515	-		LRK53_RS15535	0.73	-1.0
3,405,515	-		LRK53_RS15535	0.73	+0.4
3,405,515	-		LRK53_RS15535	0.73	-0.3
3,405,515	-		LRK53_RS15535	0.73	+0.0
3,405,522	+		LRK53_RS15535	0.73	+0.2
3,405,522	+		LRK53_RS15535	0.73	-0.5
3,405,522	+		LRK53_RS15535	0.73	-1.0
3,405,522	+		LRK53_RS15535	0.73	+2.7
3,405,522	+		LRK53_RS15535	0.73	+2.1
3,405,522	+		LRK53_RS15535	0.73	-1.0
3,405,522	+		LRK53_RS15535	0.73	-1.2
3,405,523	-		LRK53_RS15535	0.73	+1.4
3,405,523	-		LRK53_RS15535	0.73	+0.6
3,405,523	-		LRK53_RS15535	0.73	+0.0
3,405,523	-		LRK53_RS15535	0.73	+0.4
3,405,523	-		LRK53_RS15535	0.73	+0.7
3,405,560	-		LRK53_RS15535	0.75	+1.4
3,405,560	-		LRK53_RS15535	0.75	-0.5
3,405,560	-		LRK53_RS15535	0.75	+1.4
3,405,592	+		LRK53_RS15535	0.77	-0.5
3,405,592	+		LRK53_RS15535	0.77	-0.4
3,405,592	+		LRK53_RS15535	0.77	-1.8
3,405,592	+		LRK53_RS15535	0.77	-0.6
3,405,592	+		LRK53_RS15535	0.77	+1.3
3,405,592	+		LRK53_RS15535	0.77	-1.8
3,405,592	+		LRK53_RS15535	0.77	-0.4
3,405,592	+		LRK53_RS15535	0.77	-2.0
3,405,592	+		LRK53_RS15535	0.77	+0.4
3,405,592	+		LRK53_RS15535	0.77	-2.1
3,405,592	+		LRK53_RS15535	0.77	+1.0
3,405,592	+		LRK53_RS15535	0.77	+0.3
3,405,593	-		LRK53_RS15535	0.77	-1.5
3,405,593	-		LRK53_RS15535	0.77	-1.2
3,405,593	-		LRK53_RS15535	0.77	-0.6
3,405,593	-		LRK53_RS15535	0.77	+1.9
3,405,593	-		LRK53_RS15535	0.77	+0.0
3,405,593	-		LRK53_RS15535	0.77	-1.8
3,405,593	-		LRK53_RS15535	0.77	-0.9
3,405,593	-		LRK53_RS15535	0.77	-0.8
3,405,593	-		LRK53_RS15535	0.77	-0.4
3,405,593	-		LRK53_RS15535	0.77	+0.0
3,405,593	-		LRK53_RS15535	0.77	+2.4
3,405,593	-		LRK53_RS15535	0.77	-0.3
3,405,652	+		LRK53_RS15535	0.80	-1.5
3,405,652	+		LRK53_RS15535	0.80	-0.6
3,405,652	+		LRK53_RS15535	0.80	+0.0
3,405,652	+		LRK53_RS15535	0.80	+0.2
3,405,652	+		LRK53_RS15535	0.80	-1.4
3,405,652	+		LRK53_RS15535	0.80	-1.8
3,405,652	+		LRK53_RS15535	0.80	-0.9
3,405,653	-		LRK53_RS15535	0.80	+0.4
3,405,653	-		LRK53_RS15535	0.80	-1.4
3,405,653	-		LRK53_RS15535	0.80	-0.4
3,405,751	+		LRK53_RS15535	0.86	+1.1
3,405,751	+		LRK53_RS15535	0.86	+0.6
3,405,751	+		LRK53_RS15535	0.86	-1.5
3,405,752	-		LRK53_RS15535	0.86	-1.4
3,405,752	-		LRK53_RS15535	0.86	-0.4
3,405,767	-		LRK53_RS15535	0.87	-0.6
3,405,904	+				-1.8
3,405,904	+				+0.1
3,405,904	+				-0.3
3,405,904	+				-1.2
3,405,904	+				-0.4
3,405,905	-				-0.5
3,405,905	-				+0.8
3,405,905	-				+1.0
3,405,905	-				-1.2
3,405,905	-				-1.2
3,405,937	+				+0.4
3,405,937	+				-0.9
3,405,937	+				-0.8
3,405,937	+				+0.0
3,405,937	+				-1.2
3,405,937	+				+0.4
3,405,937	+				-0.6
3,405,937	+				-0.9
3,405,937	+				-0.8
3,405,937	+				-0.4
3,405,937	+				+0.2
3,405,937	+				+0.4
3,405,938	-				-0.2
3,405,938	-				-0.2
3,405,938	-				+0.4
3,405,938	-				+0.0
3,405,938	-				+0.4
3,405,967	+				+0.9
3,405,967	+				+0.4
3,405,967	+				-1.2
3,405,967	+				+0.7
3,405,967	+				+0.4
3,405,967	+				+0.1
3,405,967	+				+0.7
3,405,967	+				+0.2
3,405,967	+				-0.5
3,405,967	+				-1.1
3,405,967	+				+0.4
3,405,967	+				-1.4
3,405,967	+				+1.6
3,405,967	+				-1.3
3,405,967	+				-1.6
3,405,967	+				+0.9
3,405,968	-				+0.4
3,405,968	-				+3.7
3,405,968	-				-0.3
3,405,968	-				-1.2
3,405,968	-				-0.3
3,405,968	-				-2.3
3,405,968	-				+0.5
3,405,968	-				-1.6
3,405,968	-				-0.2
3,405,968	-				-1.4
3,405,968	-				-0.1
3,405,968	-				+0.5
3,405,968	-				-0.3
3,405,968	-				-0.4
3,405,968	-				-0.3
3,405,968	-				-0.6
3,405,968	-				-0.5
3,405,968	-				-1.8
3,405,968	-				-1.0
3,405,968	-				-0.3
3,405,968	-				+0.4
3,405,968	-				+1.6
3,405,968	-				+0.6
3,406,051	+				-0.2
3,406,051	+				-1.8
3,406,051	+				-2.6
3,406,051	+				-1.4
3,406,051	+				-0.6
3,406,052	-				-0.6
3,406,052	-				-1.1
3,406,052	-				-1.2
3,406,167	+		LRK53_RS15540	0.12	+0.4
3,406,168	-		LRK53_RS15540	0.12	-0.8
3,406,266	+		LRK53_RS15540	0.19	+1.1
3,406,266	+		LRK53_RS15540	0.19	+1.4
3,406,266	+		LRK53_RS15540	0.19	-1.2
3,406,266	+		LRK53_RS15540	0.19	+0.5
3,406,266	+		LRK53_RS15540	0.19	+0.4
3,406,266	+		LRK53_RS15540	0.19	+0.4
3,406,266	+		LRK53_RS15540	0.19	-0.1
3,406,266	+		LRK53_RS15540	0.19	+1.4
3,406,266	+		LRK53_RS15540	0.19	-0.5
3,406,266	+		LRK53_RS15540	0.19	+0.9
3,406,266	+		LRK53_RS15540	0.19	+1.9
3,406,266	+		LRK53_RS15540	0.19	+1.4
3,406,267	-		LRK53_RS15540	0.19	+0.2
3,406,267	-		LRK53_RS15540	0.19	-1.2
3,406,267	-		LRK53_RS15540	0.19	+0.4
3,406,267	-		LRK53_RS15540	0.19	+1.8
3,406,267	-		LRK53_RS15540	0.19	-0.4
3,406,311	+		LRK53_RS15540	0.23	+0.4
3,406,311	+		LRK53_RS15540	0.23	-0.2
3,406,311	+		LRK53_RS15540	0.23	+0.2
3,406,311	+		LRK53_RS15540	0.23	+0.4
3,406,311	+		LRK53_RS15540	0.23	+1.6
3,406,311	+		LRK53_RS15540	0.23	+0.4
3,406,311	+		LRK53_RS15540	0.23	-0.2
3,406,311	+		LRK53_RS15540	0.23	+0.4
3,406,311	+		LRK53_RS15540	0.23	-0.2
3,406,311	+		LRK53_RS15540	0.23	-1.2
3,406,312	-		LRK53_RS15540	0.23	-0.6
3,406,312	-		LRK53_RS15540	0.23	+1.4
3,406,312	-		LRK53_RS15540	0.23	-0.1
3,406,312	-		LRK53_RS15540	0.23	+0.6
3,406,312	-		LRK53_RS15540	0.23	+0.2
3,406,312	-		LRK53_RS15540	0.23	-0.4
3,406,312	-		LRK53_RS15540	0.23	-2.1
3,406,312	-		LRK53_RS15540	0.23	-0.6
3,406,312	-		LRK53_RS15540	0.23	-1.4
3,406,312	-		LRK53_RS15540	0.23	+0.4
3,406,312	-		LRK53_RS15540	0.23	-2.1
3,406,312	-		LRK53_RS15540	0.23	+0.6
3,406,312	-		LRK53_RS15540	0.23	-0.2
3,406,312	-		LRK53_RS15540	0.23	-0.6
3,406,312	-		LRK53_RS15540	0.23	-0.2
3,406,312	-		LRK53_RS15540	0.23	+0.2
3,406,312	-		LRK53_RS15540	0.23	+1.1
3,406,317	+		LRK53_RS15540	0.23	-0.2
3,406,317	+		LRK53_RS15540	0.23	-2.4
3,406,317	+		LRK53_RS15540	0.23	+1.9
3,406,317	+		LRK53_RS15540	0.23	-0.6
3,406,318	-		LRK53_RS15540	0.23	-0.6
3,406,318	-		LRK53_RS15540	0.23	-1.6
3,406,318	-		LRK53_RS15540	0.23	+0.6
3,406,318	-		LRK53_RS15540	0.23	-1.2
3,406,318	-		LRK53_RS15540	0.23	+1.2
3,406,375	-		LRK53_RS15540	0.27	+0.3
3,406,375	-		LRK53_RS15540	0.27	+1.4
3,406,389	+		LRK53_RS15540	0.28	-1.0
3,406,434	+		LRK53_RS15540	0.32	+0.1
3,406,434	+		LRK53_RS15540	0.32	+0.8
3,406,434	+		LRK53_RS15540	0.32	+0.5
3,406,434	+		LRK53_RS15540	0.32	+0.4
3,406,434	+		LRK53_RS15540	0.32	-0.0
3,406,434	+		LRK53_RS15540	0.32	-0.6
3,406,434	+		LRK53_RS15540	0.32	+0.9
3,406,434	+		LRK53_RS15540	0.32	-0.5
3,406,434	+		LRK53_RS15540	0.32	+1.4
3,406,434	+		LRK53_RS15540	0.32	+1.9
3,406,435	-		LRK53_RS15540	0.32	+1.0
3,406,435	-		LRK53_RS15540	0.32	-0.1
3,406,435	-		LRK53_RS15540	0.32	-2.6
3,406,435	-		LRK53_RS15540	0.32	-0.2
3,406,435	-		LRK53_RS15540	0.32	-1.4
3,406,435	-		LRK53_RS15540	0.32	+1.8
3,406,435	-		LRK53_RS15540	0.32	+1.0
3,406,435	-		LRK53_RS15540	0.32	-0.3
3,406,440	+		LRK53_RS15540	0.32	-2.0
3,406,440	+		LRK53_RS15540	0.32	-0.6
3,406,440	+		LRK53_RS15540	0.32	-1.2
3,406,440	+		LRK53_RS15540	0.32	-0.0
3,406,440	+		LRK53_RS15540	0.32	-1.0
3,406,440	+		LRK53_RS15540	0.32	-1.6
3,406,440	+		LRK53_RS15540	0.32	+0.4
3,406,440	+		LRK53_RS15540	0.32	-0.4
3,406,440	+		LRK53_RS15540	0.32	-0.5
3,406,441	-		LRK53_RS15540	0.32	-1.0
3,406,441	-		LRK53_RS15540	0.32	+0.6
3,406,441	-		LRK53_RS15540	0.32	+2.4
3,406,441	-		LRK53_RS15540	0.32	-0.2
3,406,527	+		LRK53_RS15540	0.38	+1.4
3,406,527	+		LRK53_RS15540	0.38	-1.8
3,406,527	+		LRK53_RS15540	0.38	-0.4
3,406,527	+		LRK53_RS15540	0.38	-1.1
3,406,527	+		LRK53_RS15540	0.38	-0.2
3,406,527	+		LRK53_RS15540	0.38	-1.3
3,406,527	+		LRK53_RS15540	0.38	-0.8
3,406,528	-		LRK53_RS15540	0.38	-0.6
3,406,528	-		LRK53_RS15540	0.38	+0.6
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3,406,528	-		LRK53_RS15540	0.38	-1.8
3,406,528	-		LRK53_RS15540	0.38	+1.1
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3,406,608	+		LRK53_RS15540	0.44	-1.6
3,406,609	-		LRK53_RS15540	0.44	+0.1
3,406,609	-		LRK53_RS15540	0.44	-1.3
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3,406,609	-		LRK53_RS15540	0.44	+0.1
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3,406,704	+		LRK53_RS15540	0.51	-1.6
3,406,704	+		LRK53_RS15540	0.51	-1.8
3,406,704	+		LRK53_RS15540	0.51	-0.2
3,406,704	+		LRK53_RS15540	0.51	+0.0
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3,406,705	-		LRK53_RS15540	0.51	-1.3
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3,406,705	-		LRK53_RS15540	0.51	+1.1
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3,406,878	+		LRK53_RS15540	0.64	-1.0
3,406,878	+		LRK53_RS15540	0.64	+1.3
3,406,878	+		LRK53_RS15540	0.64	-0.3
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3,406,960	-		LRK53_RS15540	0.70	+1.9
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3,407,022	+		LRK53_RS15540	0.74	-1.6
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3,407,104	+		LRK53_RS15540	0.80	-0.2
3,407,104	+		LRK53_RS15540	0.80	-2.0
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3,407,109	-		LRK53_RS15540	0.80	-0.2
3,407,109	-		LRK53_RS15540	0.80	+1.4
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3,407,246	+				-1.2
3,407,246	+				-0.4
3,407,247	-				-1.0
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3,407,247	-				-0.8
3,407,247	-				+1.4
3,407,247	-				+1.0
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3,407,316	-				-0.6
3,407,376	+				-2.8
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3,407,376	+				+0.2
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3,407,376	+				-0.2
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3,407,377	-				-0.1
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3,407,377	-				+1.6
3,407,377	-				-1.0
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3,407,377	-				-1.0
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3,407,377	-				-1.6
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3,407,614	+				+1.7
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3,407,615	-				+1.4
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3,407,699	-				-1.6
3,407,699	-				-1.5
3,407,699	-				+1.2
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3,407,699	-				-1.0
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3,407,699	-				-2.0
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3,407,699	-				+0.4
3,407,699	-				-0.8
3,407,699	-				-1.2
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3,407,699	-				+0.9
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3,407,703	-				+1.4
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3,407,901	+				-1.5
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3,407,902	-				+1.8
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