Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15500

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,390,290	-		LRK53_RS15495	0.37	-1.1
3,390,290	-		LRK53_RS15495	0.37	-0.9
3,390,335	-		LRK53_RS15495	0.40	+0.4
3,390,388	+		LRK53_RS15495	0.44	-1.0
3,390,388	+		LRK53_RS15495	0.44	+1.4
3,390,388	+		LRK53_RS15495	0.44	-0.3
3,390,388	+		LRK53_RS15495	0.44	-1.0
3,390,388	+		LRK53_RS15495	0.44	-0.3
3,390,388	+		LRK53_RS15495	0.44	+0.4
3,390,388	+		LRK53_RS15495	0.44	-1.5
3,390,388	+		LRK53_RS15495	0.44	-0.1
3,390,388	+		LRK53_RS15495	0.44	-0.6
3,390,388	+		LRK53_RS15495	0.44	+1.8
3,390,388	+		LRK53_RS15495	0.44	-1.0
3,390,389	-		LRK53_RS15495	0.44	-0.4
3,390,389	-		LRK53_RS15495	0.44	-1.3
3,390,389	-		LRK53_RS15495	0.44	-0.5
3,390,389	-		LRK53_RS15495	0.44	-0.1
3,390,389	-		LRK53_RS15495	0.44	-1.0
3,390,389	-		LRK53_RS15495	0.44	-1.0
3,390,389	-		LRK53_RS15495	0.44	-1.5
3,390,389	-		LRK53_RS15495	0.44	-0.2
3,390,389	-		LRK53_RS15495	0.44	+1.4
3,390,389	-		LRK53_RS15495	0.44	-0.1
3,390,389	-		LRK53_RS15495	0.44	-0.9
3,390,389	-		LRK53_RS15495	0.44	-0.6
3,390,389	-		LRK53_RS15495	0.44	+0.4
3,390,389	-		LRK53_RS15495	0.44	+0.4
3,390,389	-		LRK53_RS15495	0.44	+0.4
3,390,391	+		LRK53_RS15495	0.44	-1.1
3,390,391	+		LRK53_RS15495	0.44	+1.4
3,390,391	+		LRK53_RS15495	0.44	-0.3
3,390,392	-		LRK53_RS15495	0.44	-1.3
3,390,470	+		LRK53_RS15495	0.49	+1.4
3,390,470	+		LRK53_RS15495	0.49	-1.0
3,390,470	+		LRK53_RS15495	0.49	-1.8
3,390,471	-		LRK53_RS15495	0.49	-0.9
3,390,471	-		LRK53_RS15495	0.49	-1.2
3,390,471	-		LRK53_RS15495	0.49	-0.7
3,390,471	-		LRK53_RS15495	0.49	-0.5
3,390,493	+		LRK53_RS15495	0.50	+1.4
3,390,493	+		LRK53_RS15495	0.50	-0.4
3,390,494	-		LRK53_RS15495	0.50	-1.3
3,390,494	-		LRK53_RS15495	0.50	+0.5
3,390,494	-		LRK53_RS15495	0.50	+0.9
3,390,494	-		LRK53_RS15495	0.50	+0.4
3,390,541	+		LRK53_RS15495	0.53	-0.9
3,390,809	-		LRK53_RS15495	0.71	-1.0
3,390,812	-		LRK53_RS15495	0.71	+1.1
3,390,812	-		LRK53_RS15495	0.71	+0.8
3,390,812	-		LRK53_RS15495	0.71	-0.2
3,390,988	+		LRK53_RS15495	0.82	-1.7
3,390,989	-		LRK53_RS15495	0.82	-0.6
3,390,989	-		LRK53_RS15495	0.82	-1.0
3,390,989	-		LRK53_RS15495	0.82	-0.1
3,390,991	+		LRK53_RS15495	0.82	+0.4
3,390,991	+		LRK53_RS15495	0.82	+1.8
3,390,991	+		LRK53_RS15495	0.82	+1.4
3,390,991	+		LRK53_RS15495	0.82	+0.5
3,390,991	+		LRK53_RS15495	0.82	-0.1
3,390,991	+		LRK53_RS15495	0.82	+0.7
3,390,991	+		LRK53_RS15495	0.82	+0.1
3,390,991	+		LRK53_RS15495	0.82	+0.0
3,390,991	+		LRK53_RS15495	0.82	+0.3
3,390,991	+		LRK53_RS15495	0.82	-0.6
3,390,992	-		LRK53_RS15495	0.82	+1.4
3,390,992	-		LRK53_RS15495	0.82	-0.1
3,390,992	-		LRK53_RS15495	0.82	+0.8
3,390,992	-		LRK53_RS15495	0.82	-0.4
3,390,992	-		LRK53_RS15495	0.82	-2.1
3,390,992	-		LRK53_RS15495	0.82	-1.0
3,390,992	-		LRK53_RS15495	0.82	-0.6
3,390,992	-		LRK53_RS15495	0.82	+1.4
3,391,240	+				-0.6
3,391,240	+				-0.9
3,391,240	+				+1.9
3,391,240	+				+0.4
3,391,240	+				+0.5
3,391,241	-				-1.4
3,391,241	-				+2.4
3,391,758	+		LRK53_RS15500	0.20	-0.6
3,391,867	+		LRK53_RS15500	0.25	+0.7
3,391,868	-		LRK53_RS15500	0.25	+3.5
3,391,868	-		LRK53_RS15500	0.25	+1.4
3,391,974	+		LRK53_RS15500	0.29	+0.0
3,391,974	+		LRK53_RS15500	0.29	+0.9
3,391,974	+		LRK53_RS15500	0.29	-0.2
3,391,975	-		LRK53_RS15500	0.29	-0.1
3,391,975	-		LRK53_RS15500	0.29	+0.4
3,391,977	+		LRK53_RS15500	0.29	+2.4
3,391,977	+		LRK53_RS15500	0.29	+0.5
3,391,977	+		LRK53_RS15500	0.29	+0.3
3,391,977	+		LRK53_RS15500	0.29	-1.2
3,391,977	+		LRK53_RS15500	0.29	+3.7
3,391,977	+		LRK53_RS15500	0.29	+0.4
3,391,977	+		LRK53_RS15500	0.29	-0.5
3,391,977	+		LRK53_RS15500	0.29	+0.0
3,391,977	+		LRK53_RS15500	0.29	-0.7
3,391,977	+		LRK53_RS15500	0.29	-1.2
3,391,977	+		LRK53_RS15500	0.29	+0.4
3,391,977	+		LRK53_RS15500	0.29	+1.4
3,391,977	+		LRK53_RS15500	0.29	-2.2
3,391,977	+		LRK53_RS15500	0.29	+0.4
3,391,977	+		LRK53_RS15500	0.29	-0.6
3,391,978	-		LRK53_RS15500	0.29	-1.0
3,391,978	-		LRK53_RS15500	0.29	-1.6
3,391,978	-		LRK53_RS15500	0.29	-1.0
3,391,978	-		LRK53_RS15500	0.29	-1.5
3,391,978	-		LRK53_RS15500	0.29	-0.2
3,391,978	-		LRK53_RS15500	0.29	-0.6
3,391,978	-		LRK53_RS15500	0.29	-1.5
3,391,978	-		LRK53_RS15500	0.29	+1.7
3,391,978	-		LRK53_RS15500	0.29	+3.4
3,392,124	+		LRK53_RS15500	0.35	+0.1
3,392,124	+		LRK53_RS15500	0.35	+0.4
3,392,124	+		LRK53_RS15500	0.35	+0.6
3,392,125	-		LRK53_RS15500	0.35	-0.4
3,392,385	+		LRK53_RS15500	0.46	-0.6
3,392,385	+		LRK53_RS15500	0.46	-1.6
3,392,385	+		LRK53_RS15500	0.46	-0.9
3,392,385	+		LRK53_RS15500	0.46	-1.0
3,392,385	+		LRK53_RS15500	0.46	+0.8
3,392,385	+		LRK53_RS15500	0.46	+0.7
3,392,385	+		LRK53_RS15500	0.46	-0.6
3,392,385	+		LRK53_RS15500	0.46	-1.1
3,392,385	+		LRK53_RS15500	0.46	+0.6
3,392,385	+		LRK53_RS15500	0.46	+0.8
3,392,385	+		LRK53_RS15500	0.46	-0.3
3,392,386	-		LRK53_RS15500	0.46	+0.1
3,392,386	-		LRK53_RS15500	0.46	-1.2
3,392,386	-		LRK53_RS15500	0.46	+1.4
3,392,386	-		LRK53_RS15500	0.46	+0.0
3,392,386	-		LRK53_RS15500	0.46	-1.8
3,392,386	-		LRK53_RS15500	0.46	-1.5
3,392,466	+		LRK53_RS15500	0.50	-0.7
3,392,466	+		LRK53_RS15500	0.50	-1.0
3,392,466	+		LRK53_RS15500	0.50	-1.8
3,392,467	-		LRK53_RS15500	0.50	-1.2
3,392,559	+		LRK53_RS15500	0.54	+0.9
3,392,559	+		LRK53_RS15500	0.54	-0.5
3,392,559	+		LRK53_RS15500	0.54	+0.5
3,392,560	-		LRK53_RS15500	0.54	-0.6
3,392,560	-		LRK53_RS15500	0.54	-0.0
3,392,560	-		LRK53_RS15500	0.54	+0.4
3,392,634	+		LRK53_RS15500	0.57	-0.1
3,392,787	+		LRK53_RS15500	0.63	-0.5
3,392,788	-		LRK53_RS15500	0.63	-0.6
3,392,871	+		LRK53_RS15500	0.67	+0.4
3,392,871	+		LRK53_RS15500	0.67	-1.0
3,392,871	+		LRK53_RS15500	0.67	+2.1
3,392,871	+		LRK53_RS15500	0.67	-1.2
3,392,871	+		LRK53_RS15500	0.67	-0.2
3,392,872	-		LRK53_RS15500	0.67	-2.0
3,392,872	-		LRK53_RS15500	0.67	-1.2
3,392,872	-		LRK53_RS15500	0.67	-0.3
3,392,872	-		LRK53_RS15500	0.67	-1.1
3,392,872	-		LRK53_RS15500	0.67	-0.6
3,392,934	+		LRK53_RS15500	0.69	-0.6
3,392,934	+		LRK53_RS15500	0.69	+0.5
3,392,935	-		LRK53_RS15500	0.69	-0.8
3,392,935	-		LRK53_RS15500	0.69	+0.2
3,392,935	-		LRK53_RS15500	0.69	-0.9
3,392,935	-		LRK53_RS15500	0.69	+0.9
3,392,940	+		LRK53_RS15500	0.69	-1.0
3,392,940	+		LRK53_RS15500	0.69	+1.4
3,392,940	+		LRK53_RS15500	0.69	+1.1
3,392,940	+		LRK53_RS15500	0.69	-1.6
3,392,940	+		LRK53_RS15500	0.69	-0.8
3,392,940	+		LRK53_RS15500	0.69	-0.2
3,392,940	+		LRK53_RS15500	0.69	-2.0
3,392,941	-		LRK53_RS15500	0.70	+1.4
3,392,941	-		LRK53_RS15500	0.70	-1.3
3,392,941	-		LRK53_RS15500	0.70	-0.2
3,392,941	-		LRK53_RS15500	0.70	-3.4
3,392,941	-		LRK53_RS15500	0.70	+1.4
3,392,941	-		LRK53_RS15500	0.70	-0.2
3,392,941	-		LRK53_RS15500	0.70	-1.3
3,392,941	-		LRK53_RS15500	0.70	+0.6
3,392,941	-		LRK53_RS15500	0.70	-0.6
3,392,941	-		LRK53_RS15500	0.70	-1.2
3,392,946	+		LRK53_RS15500	0.70	-1.2
3,392,946	+		LRK53_RS15500	0.70	+0.6
3,392,947	-		LRK53_RS15500	0.70	-0.8
3,392,947	-		LRK53_RS15500	0.70	-1.8
3,392,947	-		LRK53_RS15500	0.70	-1.2
3,393,081	-		LRK53_RS15500	0.75	-2.6
3,393,081	-		LRK53_RS15500	0.75	-0.8
3,393,108	+		LRK53_RS15500	0.77	-0.2
3,393,108	+		LRK53_RS15500	0.77	-1.2
3,393,108	+		LRK53_RS15500	0.77	-0.8
3,393,108	+		LRK53_RS15500	0.77	-0.9
3,393,108	+		LRK53_RS15500	0.77	-0.3
3,393,108	+		LRK53_RS15500	0.77	-1.0
3,393,108	+		LRK53_RS15500	0.77	+0.4
3,393,108	+		LRK53_RS15500	0.77	-1.1
3,393,108	+		LRK53_RS15500	0.77	-1.2
3,393,108	+		LRK53_RS15500	0.77	+1.2
3,393,108	+		LRK53_RS15500	0.77	-0.6
3,393,108	+		LRK53_RS15500	0.77	-1.2
3,393,109	-		LRK53_RS15500	0.77	+0.4
3,393,109	-		LRK53_RS15500	0.77	+1.3
3,393,109	-		LRK53_RS15500	0.77	-0.2
3,393,109	-		LRK53_RS15500	0.77	-0.6
3,393,109	-		LRK53_RS15500	0.77	-1.0
3,393,109	-		LRK53_RS15500	0.77	+0.5
3,393,109	-		LRK53_RS15500	0.77	-1.2
3,393,109	-		LRK53_RS15500	0.77	-2.3
3,393,109	-		LRK53_RS15500	0.77	+0.1
3,393,109	-		LRK53_RS15500	0.77	-1.6
3,393,109	-		LRK53_RS15500	0.77	-2.1
3,393,109	-		LRK53_RS15500	0.77	-1.0
3,393,109	-		LRK53_RS15500	0.77	+0.4
3,393,109	-		LRK53_RS15500	0.77	-1.2
3,393,154	-		LRK53_RS15500	0.78	-1.6
3,393,264	+		LRK53_RS15500	0.83	-0.4
3,393,264	+		LRK53_RS15500	0.83	+1.4
3,393,264	+		LRK53_RS15500	0.83	-1.0
3,393,264	+		LRK53_RS15500	0.83	-1.0
3,393,264	+		LRK53_RS15500	0.83	+0.4
3,393,264	+		LRK53_RS15500	0.83	-0.0
3,393,265	-		LRK53_RS15500	0.83	-0.4
3,393,265	-		LRK53_RS15500	0.83	+1.1
3,393,265	-		LRK53_RS15500	0.83	+0.9
3,393,265	-		LRK53_RS15500	0.83	-0.9
3,393,265	-		LRK53_RS15500	0.83	-0.6
3,393,265	-		LRK53_RS15500	0.83	+0.4
3,393,337	-		LRK53_RS15500	0.86	+0.4
3,393,339	+		LRK53_RS15500	0.86	-0.4
3,393,339	+		LRK53_RS15500	0.86	+0.4
3,393,339	+		LRK53_RS15500	0.86	-0.4
3,393,339	+		LRK53_RS15500	0.86	-1.0
3,393,339	+		LRK53_RS15500	0.86	-1.8
3,393,339	+		LRK53_RS15500	0.86	+0.5
3,393,340	-		LRK53_RS15500	0.86	-1.2
3,393,340	-		LRK53_RS15500	0.86	-0.9
3,393,360	+		LRK53_RS15500	0.87	-1.8
3,393,367	-		LRK53_RS15500	0.87	-1.2
3,393,381	+		LRK53_RS15500	0.88	-1.0
3,393,381	+		LRK53_RS15500	0.88	+0.4
3,393,381	+		LRK53_RS15500	0.88	-1.6
3,393,381	+		LRK53_RS15500	0.88	+0.4
3,393,382	-		LRK53_RS15500	0.88	+1.1
3,393,382	-		LRK53_RS15500	0.88	-1.8
3,393,382	-		LRK53_RS15500	0.88	-1.8
3,393,382	-		LRK53_RS15500	0.88	-0.6
3,393,382	-		LRK53_RS15500	0.88	-0.7
3,393,382	-		LRK53_RS15500	0.88	-1.0
3,393,424	+		LRK53_RS15500	0.90	+0.8
3,393,424	+		LRK53_RS15500	0.90	-1.6
3,393,424	+		LRK53_RS15500	0.90	-0.9
3,393,424	+		LRK53_RS15500	0.90	+0.0
3,393,425	-		LRK53_RS15500	0.90	-0.3
3,393,425	-		LRK53_RS15500	0.90	-1.0
3,393,477	+				-1.6
3,393,478	-				-1.0
3,393,673	-				-0.5
3,393,673	-				+0.8
3,393,673	-				-1.7
3,393,673	-				-0.6
3,393,673	-				-0.1
3,393,673	-				-1.8
3,393,744	-				+0.3
3,393,744	-				-0.8
3,393,744	-				-1.1
3,393,881	+				+0.4
3,393,888	+				+0.1
3,393,974	+				+2.4
3,393,983	+				-0.1
3,393,983	+				-0.1
3,393,983	+				+0.5
3,393,983	+				-1.6
3,393,983	+				-1.2
3,393,984	-				+1.6
3,393,984	-				+0.4
3,393,984	-				+0.2
3,393,984	-				-0.2
3,393,984	-				-2.1
3,393,984	-				-0.1
3,393,984	-				-1.2
3,394,064	+				+0.2
3,394,064	+				+1.4
3,394,064	+				-0.5
3,394,064	+				-0.0
3,394,064	+				-2.0
3,394,065	-				-1.0
3,394,065	-				-0.2
3,394,065	-				-0.2
3,394,065	-				+0.0
3,394,067	+				-1.5
3,394,067	+				-1.2
3,394,067	+				-0.9
3,394,068	-				+0.0
3,394,068	-				-0.9
3,394,068	-				-0.9
3,394,068	-				-0.6
3,394,068	-				-0.1
3,394,068	-				+0.4
3,394,068	-				-2.5
3,394,068	-				-0.2
3,394,068	-				-1.6
3,394,181	+		LRK53_RS15505	0.15	-1.6
3,394,181	+		LRK53_RS15505	0.15	-0.2
3,394,181	+		LRK53_RS15505	0.15	-0.2
3,394,181	+		LRK53_RS15505	0.15	-2.1
3,394,181	+		LRK53_RS15505	0.15	+0.0
3,394,182	-		LRK53_RS15505	0.15	-0.9
3,394,184	+		LRK53_RS15505	0.15	-0.1
3,394,184	+		LRK53_RS15505	0.15	-0.1
3,394,184	+		LRK53_RS15505	0.15	-1.5
3,394,185	-		LRK53_RS15505	0.15	-1.7
3,394,322	+		LRK53_RS15505	0.22	-1.8
3,394,322	+		LRK53_RS15505	0.22	-0.6
3,394,323	-		LRK53_RS15505	0.22	+0.4
3,394,323	-		LRK53_RS15505	0.22	-0.4
3,394,323	-		LRK53_RS15505	0.22	+0.6
3,394,347	-		LRK53_RS15505	0.23	-1.9
3,394,347	-		LRK53_RS15505	0.23	-1.2
3,394,347	-		LRK53_RS15505	0.23	-1.2
3,394,385	+		LRK53_RS15505	0.25	-0.1
3,394,385	+		LRK53_RS15505	0.25	-0.3
3,394,385	+		LRK53_RS15505	0.25	-0.6
3,394,385	+		LRK53_RS15505	0.25	-1.5
3,394,386	-		LRK53_RS15505	0.25	-2.6
3,394,386	-		LRK53_RS15505	0.25	-1.0
3,394,386	-		LRK53_RS15505	0.25	+1.4
3,394,386	-		LRK53_RS15505	0.25	-0.6
3,394,386	-		LRK53_RS15505	0.25	+0.5
3,394,386	-		LRK53_RS15505	0.25	-1.2
3,394,386	-		LRK53_RS15505	0.25	+0.2
3,394,391	+		LRK53_RS15505	0.26	+1.4
3,394,391	+		LRK53_RS15505	0.26	-0.9
3,394,392	-		LRK53_RS15505	0.26	+0.0
3,394,392	-		LRK53_RS15505	0.26	-1.0
3,394,392	-		LRK53_RS15505	0.26	-0.6
3,394,511	+		LRK53_RS15505	0.32	+0.5
3,394,511	+		LRK53_RS15505	0.32	+0.2
3,394,512	-		LRK53_RS15505	0.32	-0.2
3,394,512	-		LRK53_RS15505	0.32	-0.3
3,394,544	+		LRK53_RS15505	0.33	-0.2
3,394,544	+		LRK53_RS15505	0.33	+2.4
3,394,544	+		LRK53_RS15505	0.33	+0.6
3,394,544	+		LRK53_RS15505	0.33	-1.0
3,394,544	+		LRK53_RS15505	0.33	-1.8
3,394,545	-		LRK53_RS15505	0.34	-0.2
3,394,545	-		LRK53_RS15505	0.34	+0.0
3,394,545	-		LRK53_RS15505	0.34	-0.0
3,394,583	+		LRK53_RS15505	0.36	+1.4
3,394,583	+		LRK53_RS15505	0.36	-0.1
3,394,583	+		LRK53_RS15505	0.36	+0.4
3,394,583	+		LRK53_RS15505	0.36	-1.6
3,394,583	+		LRK53_RS15505	0.36	+0.5
3,394,584	-		LRK53_RS15505	0.36	-1.2
3,394,584	-		LRK53_RS15505	0.36	-2.7
3,394,584	-		LRK53_RS15505	0.36	-0.4
3,394,584	-		LRK53_RS15505	0.36	+0.4
3,394,598	+		LRK53_RS15505	0.36	-1.5
3,394,598	+		LRK53_RS15505	0.36	-1.5
3,394,598	+		LRK53_RS15505	0.36	+0.5
3,394,598	+		LRK53_RS15505	0.36	-1.5
3,394,598	+		LRK53_RS15505	0.36	+0.1
3,394,598	+		LRK53_RS15505	0.36	+0.0
3,394,599	-		LRK53_RS15505	0.36	+2.4
3,394,599	-		LRK53_RS15505	0.36	-0.2
3,394,599	-		LRK53_RS15505	0.36	-0.2
3,394,599	-		LRK53_RS15505	0.36	-0.2
3,394,599	-		LRK53_RS15505	0.36	-0.6
3,394,599	-		LRK53_RS15505	0.36	-0.6