Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15155

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,308,826	+				-0.6
3,308,826	+				-0.6
3,308,826	+				-0.3
3,308,826	+				+0.8
3,308,826	+				-0.5
3,308,827	-				-1.5
3,308,827	-				-0.4
3,308,827	-				-4.5
3,308,970	+		LRK53_RS15150	0.27	-1.1
3,308,970	+		LRK53_RS15150	0.27	-2.2
3,308,971	-		LRK53_RS15150	0.27	-0.9
3,309,204	+		LRK53_RS15150	0.57	-0.1
3,309,204	+		LRK53_RS15150	0.57	-0.5
3,309,205	-		LRK53_RS15150	0.57	-0.6
3,309,205	-		LRK53_RS15150	0.57	+1.4
3,309,444	+		LRK53_RS15150	0.87	-1.6
3,309,444	+		LRK53_RS15150	0.87	+0.8
3,309,444	+		LRK53_RS15150	0.87	-0.2
3,309,445	-		LRK53_RS15150	0.87	-1.5
3,309,670	+		LRK53_RS15155	0.10	-1.0
3,309,670	+		LRK53_RS15155	0.10	+1.0
3,309,670	+		LRK53_RS15155	0.10	-0.5
3,309,671	-		LRK53_RS15155	0.10	+0.5
3,310,037	+		LRK53_RS15155	0.60	+0.8
3,310,038	-		LRK53_RS15155	0.60	-1.5
3,310,038	-		LRK53_RS15155	0.60	+0.2
3,310,039	+		LRK53_RS15155	0.60	+0.4
3,310,039	+		LRK53_RS15155	0.60	+0.4
3,310,039	+		LRK53_RS15155	0.60	-1.8
3,310,039	+		LRK53_RS15155	0.60	-0.1
3,310,039	+		LRK53_RS15155	0.60	+0.7
3,310,039	+		LRK53_RS15155	0.60	-1.6
3,310,039	+		LRK53_RS15155	0.60	+0.7
3,310,039	+		LRK53_RS15155	0.60	+0.7
3,310,040	-		LRK53_RS15155	0.60	-1.5
3,310,040	-		LRK53_RS15155	0.60	-1.2
3,310,040	-		LRK53_RS15155	0.60	-2.0
3,310,314	+				-0.6
3,310,314	+				-1.6
3,310,314	+				-0.2
3,310,314	+				-0.2
3,310,314	+				+0.8
3,310,314	+				-0.5
3,310,314	+				+0.4
3,310,314	+				-2.1
3,310,314	+				-1.2
3,310,314	+				+0.4
3,310,314	+				+1.8
3,310,314	+				-1.6
3,310,314	+				-0.3
3,310,314	+				-1.7
3,310,314	+				-1.1
3,310,315	-				-1.2
3,310,315	-				+0.0
3,310,315	-				-1.8
3,310,315	-				+0.4
3,310,315	-				+2.9
3,310,315	-				-1.8
3,310,315	-				-0.4
3,310,315	-				-0.2
3,310,315	-				+0.1
3,310,315	-				+1.1
3,310,315	-				+0.8
3,310,315	-				-0.1
3,310,315	-				+0.0
3,310,315	-				+1.4
3,310,315	-				+1.4
3,310,318	+				-0.1
3,310,318	+				-1.5
3,310,318	+				-2.8
3,310,319	-				+0.1
3,310,319	-				+1.4
3,310,319	-				+0.2
3,310,319	-				-0.5
3,310,319	-				+1.4
3,310,494	+				-1.2
3,310,494	+				-0.9
3,310,494	+				-0.4
3,310,494	+				-1.0
3,310,494	+				-0.2
3,310,494	+				-0.2
3,310,494	+				+0.4
3,310,494	+				+0.1
3,310,495	-				-1.0
3,310,495	-				+0.4
3,310,495	-				-0.5
3,310,495	-				-1.0
3,310,495	-				-1.5
3,310,495	-				-1.0
3,310,495	-				+0.3
3,310,495	-				-1.0
3,310,498	+				-1.2
3,310,498	+				+0.8
3,310,498	+				-0.0
3,310,498	+				-0.5
3,310,499	-				+0.2
3,310,504	+				+0.4
3,310,504	+				-2.2
3,310,504	+				-2.8
3,310,504	+				-2.1
3,310,504	+				-0.5
3,310,505	-				+0.4
3,310,505	-				+0.2
3,310,505	-				-0.5
3,310,505	-				-2.0
3,310,505	-				+0.0
3,310,505	-				+0.9
3,310,505	-				-1.2
3,310,505	-				-0.2
3,310,505	-				-1.8
3,310,563	+				-0.2
3,310,563	+				-0.6
3,310,563	+				+1.8
3,310,563	+				-1.8
3,310,563	+				+0.4
3,310,563	+				-0.2
3,310,563	+				-1.0
3,310,563	+				-0.2
3,310,563	+				-0.2
3,310,563	+				+2.4
3,310,563	+				-1.2
3,310,563	+				+1.4
3,310,564	-				-0.2
3,310,564	-				-2.6
3,310,564	-				+0.6
3,310,564	-				+0.8
3,310,564	-				-0.5
3,310,564	-				+0.6
3,310,564	-				-1.0
3,310,564	-				-0.6
3,310,698	+		LRK53_RS15160	0.17	-1.2
3,310,698	+		LRK53_RS15160	0.17	-2.1
3,310,698	+		LRK53_RS15160	0.17	-1.5
3,310,699	-		LRK53_RS15160	0.17	+1.4
3,310,800	+		LRK53_RS15160	0.25	-0.6
3,310,800	+		LRK53_RS15160	0.25	+1.7
3,310,801	-		LRK53_RS15160	0.25	-1.4
3,310,801	-		LRK53_RS15160	0.25	-0.2
3,310,801	-		LRK53_RS15160	0.25	+1.4
3,311,064	+		LRK53_RS15160	0.47	+1.4
3,311,064	+		LRK53_RS15160	0.47	+1.4
3,311,064	+		LRK53_RS15160	0.47	-0.3
3,311,064	+		LRK53_RS15160	0.47	+0.1
3,311,064	+		LRK53_RS15160	0.47	+0.6
3,311,064	+		LRK53_RS15160	0.47	-0.2
3,311,064	+		LRK53_RS15160	0.47	+1.4
3,311,064	+		LRK53_RS15160	0.47	+0.6
3,311,064	+		LRK53_RS15160	0.47	+2.9
3,311,064	+		LRK53_RS15160	0.47	-1.1
3,311,065	-		LRK53_RS15160	0.47	+0.4
3,311,065	-		LRK53_RS15160	0.47	+0.2
3,311,065	-		LRK53_RS15160	0.47	-2.2
3,311,065	-		LRK53_RS15160	0.47	-0.2
3,311,065	-		LRK53_RS15160	0.47	-0.2
3,311,065	-		LRK53_RS15160	0.47	-0.9
3,311,065	-		LRK53_RS15160	0.47	-0.7
3,311,065	-		LRK53_RS15160	0.47	-0.5
3,311,065	-		LRK53_RS15160	0.47	+0.4
3,311,065	-		LRK53_RS15160	0.47	+0.4
3,311,065	-		LRK53_RS15160	0.47	+0.4
3,311,099	+		LRK53_RS15160	0.50	+2.2
3,311,109	+		LRK53_RS15160	0.50	+1.4
3,311,109	+		LRK53_RS15160	0.50	+0.8
3,311,109	+		LRK53_RS15160	0.50	+0.2
3,311,109	+		LRK53_RS15160	0.50	-0.8
3,311,109	+		LRK53_RS15160	0.50	+0.7
3,311,109	+		LRK53_RS15160	0.50	-1.6
3,311,109	+		LRK53_RS15160	0.50	+0.7
3,311,109	+		LRK53_RS15160	0.50	-0.5
3,311,109	+		LRK53_RS15160	0.50	+1.4
3,311,109	+		LRK53_RS15160	0.50	-0.5
3,311,109	+		LRK53_RS15160	0.50	-0.6
3,311,110	-		LRK53_RS15160	0.50	-0.5
3,311,110	-		LRK53_RS15160	0.50	-1.5
3,311,110	-		LRK53_RS15160	0.50	+0.2
3,311,110	-		LRK53_RS15160	0.50	+0.1
3,311,110	-		LRK53_RS15160	0.50	+1.1
3,311,110	-		LRK53_RS15160	0.50	-1.8
3,311,110	-		LRK53_RS15160	0.50	+0.9
3,311,145	+		LRK53_RS15160	0.53	+1.1
3,311,145	+		LRK53_RS15160	0.53	-0.2
3,311,145	+		LRK53_RS15160	0.53	-2.4
3,311,145	+		LRK53_RS15160	0.53	-0.2
3,311,146	-		LRK53_RS15160	0.53	-2.6
3,311,172	+		LRK53_RS15160	0.55	-0.2
3,311,172	+		LRK53_RS15160	0.55	-1.0
3,311,172	+		LRK53_RS15160	0.55	-0.2
3,311,172	+		LRK53_RS15160	0.55	+0.0
3,311,172	+		LRK53_RS15160	0.55	+0.4
3,311,172	+		LRK53_RS15160	0.55	-1.2
3,311,173	-		LRK53_RS15160	0.56	+0.0