Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13590

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,994,910	+				-1.0
2,994,910	+				-1.2
2,994,910	+				-0.6
2,994,910	+				-0.4
2,994,910	+				-0.7
2,994,910	+				+0.3
2,994,910	+				+1.5
2,994,910	+				-1.0
2,994,910	+				-0.4
2,994,910	+				+1.3
2,994,910	+				-1.3
2,994,910	+				-0.4
2,994,910	+				+1.1
2,994,910	+				+3.5
2,994,910	+				-0.9
2,994,910	+				-1.9
2,994,910	+				+0.3
2,994,910	+				-1.4
2,994,910	+				-1.7
2,994,910	+				+0.3
2,994,910	+				-0.3
2,994,910	+				+0.1
2,994,910	+				-1.2
2,994,911	-				+1.6
2,994,911	-				-0.9
2,994,911	-				+0.3
2,994,911	-				-0.7
2,994,911	-				+1.5
2,994,911	-				-0.0
2,994,911	-				-0.6
2,994,911	-				+0.4
2,994,911	-				-0.0
2,994,911	-				+2.1
2,994,911	-				-2.0
2,994,911	-				-0.7
2,994,929	+				+0.1
2,994,929	+				-0.2
2,994,929	+				-0.7
2,994,929	+				+0.0
2,994,929	+				-1.5
2,994,929	+				+1.3
2,994,929	+				-1.5
2,994,929	+				+1.3
2,994,929	+				-0.9
2,994,929	+				-1.5
2,994,929	+				-0.9
2,994,929	+				-1.0
2,994,929	+				+1.3
2,994,929	+				-0.3
2,994,929	+				-1.6
2,994,929	+				-1.5
2,994,929	+				+1.0
2,994,929	+				-0.7
2,994,929	+				-1.4
2,994,929	+				-1.0
2,994,929	+				-0.7
2,994,929	+				-0.1
2,994,929	+				-0.2
2,994,929	+				-2.2
2,994,929	+				-0.3
2,994,929	+				-1.2
2,994,929	+				-0.5
2,994,929	+				-0.9
2,994,929	+				-0.8
2,994,930	-				+0.7
2,994,930	-				+1.5
2,994,930	-				-1.2
2,994,930	-				-1.3
2,994,930	-				+0.1
2,994,930	-				-0.5
2,994,930	-				-0.0
2,994,930	-				-0.0
2,994,930	-				-2.3
2,994,930	-				+0.3
2,994,930	-				+0.6
2,994,930	-				-0.6
2,994,930	-				+0.3
2,994,930	-				-1.3
2,994,930	-				+0.9
2,994,930	-				-0.2
2,994,930	-				+1.3
2,994,930	-				+0.5
2,994,930	-				-2.0
2,994,930	-				-0.4
2,994,930	-				-0.3
2,994,930	-				+2.3
2,994,930	-				-1.0
2,994,930	-				+0.3
2,994,930	-				+0.3
2,994,930	-				-2.0
2,994,930	-				+1.3
2,994,930	-				-1.7
2,994,930	-				-0.1
2,994,930	-				+0.5
2,994,930	-				-1.6
2,994,930	-				-0.5
2,994,930	-				-1.0
2,994,930	-				-2.0
2,994,930	-				+0.0
2,994,930	-				+1.3
2,994,930	-				-0.5
2,994,930	-				-1.5
2,994,930	-				+1.3
2,994,930	-				-1.0
2,994,930	-				-1.7
2,995,264	+		LRK53_RS13585	0.44	+0.7
2,995,264	+		LRK53_RS13585	0.44	+0.9
2,995,264	+		LRK53_RS13585	0.44	-1.0
2,995,264	+		LRK53_RS13585	0.44	+0.6
2,995,264	+		LRK53_RS13585	0.44	+1.3
2,995,264	+		LRK53_RS13585	0.44	-0.6
2,995,264	+		LRK53_RS13585	0.44	+0.5
2,995,264	+		LRK53_RS13585	0.44	+0.8
2,995,264	+		LRK53_RS13585	0.44	-0.2
2,995,265	-		LRK53_RS13585	0.44	-0.4
2,995,265	-		LRK53_RS13585	0.44	+0.1
2,995,265	-		LRK53_RS13585	0.44	-1.0
2,995,265	-		LRK53_RS13585	0.44	+0.5
2,995,265	-		LRK53_RS13585	0.44	-1.4
2,995,265	-		LRK53_RS13585	0.44	-0.6
2,995,265	-		LRK53_RS13585	0.44	-1.9
2,995,265	-		LRK53_RS13585	0.44	+1.9
2,995,265	-		LRK53_RS13585	0.44	-1.3
2,995,265	-		LRK53_RS13585	0.44	-1.3
2,995,265	-		LRK53_RS13585	0.44	-0.1
2,995,265	-		LRK53_RS13585	0.44	+0.3
2,995,265	-		LRK53_RS13585	0.44	-0.2
2,995,265	-		LRK53_RS13585	0.44	-0.8
2,995,265	-		LRK53_RS13585	0.44	-1.3
2,995,265	-		LRK53_RS13585	0.44	-0.3
2,995,265	-		LRK53_RS13585	0.44	-0.3
2,995,265	-		LRK53_RS13585	0.44	-1.2
2,995,265	-		LRK53_RS13585	0.44	-1.0
2,995,438	+		LRK53_RS13585	0.69	-0.1
2,995,450	+		LRK53_RS13585	0.71	-1.1
2,995,450	+		LRK53_RS13585	0.71	+0.0
2,995,451	-		LRK53_RS13585	0.71	-0.1
2,995,480	+		LRK53_RS13585	0.75	+0.6
2,995,481	-		LRK53_RS13585	0.75	-2.4
2,995,525	+		LRK53_RS13585	0.82	+0.0
2,995,525	+		LRK53_RS13585	0.82	-0.7
2,995,525	+		LRK53_RS13585	0.82	+0.3
2,995,525	+		LRK53_RS13585	0.82	-0.4
2,995,525	+		LRK53_RS13585	0.82	-2.3
2,995,525	+		LRK53_RS13585	0.82	-0.3
2,995,525	+		LRK53_RS13585	0.82	-1.1
2,995,526	-		LRK53_RS13585	0.82	-1.3
2,995,526	-		LRK53_RS13585	0.82	-0.8
2,995,526	-		LRK53_RS13585	0.82	-0.0
2,995,526	-		LRK53_RS13585	0.82	-2.2
2,995,526	-		LRK53_RS13585	0.82	-0.9
2,995,526	-		LRK53_RS13585	0.82	-0.7
2,995,526	-		LRK53_RS13585	0.82	-1.2
2,995,931	+				-0.0
2,995,931	+				+1.3
2,995,931	+				+0.9
2,995,931	+				-1.0
2,995,931	+				+0.1
2,995,931	+				+1.1
2,995,931	+				-1.7
2,995,932	-				-0.1
2,995,932	-				+0.1
2,995,932	-				-1.7
2,995,932	-				-0.4
2,995,932	-				-0.2
2,996,363	+		LRK53_RS13590	0.43	-0.7
2,996,363	+		LRK53_RS13590	0.43	-1.0
2,996,363	+		LRK53_RS13590	0.43	+0.7
2,996,363	+		LRK53_RS13590	0.43	-0.3
2,996,363	+		LRK53_RS13590	0.43	-1.3
2,996,364	-		LRK53_RS13590	0.43	-0.5
2,996,364	-		LRK53_RS13590	0.43	-0.0
2,996,364	-		LRK53_RS13590	0.43	-0.8
2,996,364	-		LRK53_RS13590	0.43	-1.7
2,996,675	+		LRK53_RS13590	0.71	-1.6
2,996,676	-		LRK53_RS13590	0.71	-0.7
2,996,677	+		LRK53_RS13590	0.71	+1.3
2,996,677	+		LRK53_RS13590	0.71	-3.1
2,996,677	+		LRK53_RS13590	0.71	-1.0
2,996,677	+		LRK53_RS13590	0.71	+0.5
2,996,677	+		LRK53_RS13590	0.71	-0.5
2,996,677	+		LRK53_RS13590	0.71	-1.5
2,996,678	-		LRK53_RS13590	0.72	-0.2
2,996,678	-		LRK53_RS13590	0.72	-0.5
2,996,678	-		LRK53_RS13590	0.72	-1.4
2,996,678	-		LRK53_RS13590	0.72	+0.7
2,996,678	-		LRK53_RS13590	0.72	-0.6
2,996,678	-		LRK53_RS13590	0.72	+0.6
2,996,735	+		LRK53_RS13590	0.77	-0.9
2,996,735	+		LRK53_RS13590	0.77	-0.8
2,996,735	+		LRK53_RS13590	0.77	-1.4
2,996,735	+		LRK53_RS13590	0.77	-1.0
2,996,735	+		LRK53_RS13590	0.77	-1.4
2,996,735	+		LRK53_RS13590	0.77	-2.5
2,996,736	-		LRK53_RS13590	0.77	-0.0
2,996,736	-		LRK53_RS13590	0.77	+0.2
2,996,736	-		LRK53_RS13590	0.77	-1.9
2,996,736	-		LRK53_RS13590	0.77	-0.5
2,996,736	-		LRK53_RS13590	0.77	-0.8
2,996,801	+		LRK53_RS13590	0.83	-0.6
2,996,801	+		LRK53_RS13590	0.83	-0.6
2,997,192	+				-1.0
2,997,193	-				-0.7
2,997,360	+		LRK53_RS13595	0.15	-0.8
2,997,360	+		LRK53_RS13595	0.15	-0.7
2,997,361	-		LRK53_RS13595	0.15	-0.0
2,997,361	-		LRK53_RS13595	0.15	+0.7
2,997,361	-		LRK53_RS13595	0.15	+0.1
2,997,754	-		LRK53_RS13595	0.34	+0.3