Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13445

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,969,328	+				+1.0
2,969,328	+				-0.4
2,969,328	+				-0.2
2,969,328	+				-0.0
2,969,328	+				-0.8
2,969,328	+				-0.0
2,969,329	-				-0.1
2,969,329	-				-0.1
2,969,329	-				-0.2
2,969,487	+				-0.9
2,969,487	+				+0.3
2,969,487	+				+1.6
2,969,487	+				+0.5
2,969,487	+				-1.8
2,969,487	+				-0.2
2,969,487	+				+0.9
2,969,487	+				-0.8
2,969,487	+				+0.3
2,969,487	+				-0.3
2,969,487	+				+0.1
2,969,487	+				-0.3
2,969,487	+				-1.0
2,969,488	-				-0.3
2,969,488	-				+1.3
2,969,488	-				-1.0
2,969,488	-				-0.4
2,969,488	-				-2.3
2,969,488	-				-0.3
2,969,488	-				-0.9
2,969,488	-				+0.7
2,969,488	-				+0.7
2,969,488	-				-0.5
2,969,488	-				+0.5
2,969,488	-				-0.3
2,969,488	-				-0.9
2,969,535	+		LRK53_RS13440	0.12	-1.5
2,969,535	+		LRK53_RS13440	0.12	+1.3
2,969,535	+		LRK53_RS13440	0.12	-0.7
2,969,535	+		LRK53_RS13440	0.12	+0.6
2,969,535	+		LRK53_RS13440	0.12	+0.9
2,969,535	+		LRK53_RS13440	0.12	+1.0
2,969,535	+		LRK53_RS13440	0.12	+0.5
2,969,535	+		LRK53_RS13440	0.12	+1.9
2,969,535	+		LRK53_RS13440	0.12	-2.4
2,969,535	+		LRK53_RS13440	0.12	-0.6
2,969,535	+		LRK53_RS13440	0.12	-1.9
2,969,535	+		LRK53_RS13440	0.12	-0.3
2,969,536	-		LRK53_RS13440	0.13	+0.6
2,969,536	-		LRK53_RS13440	0.13	-1.5
2,969,536	-		LRK53_RS13440	0.13	-1.5
2,969,536	-		LRK53_RS13440	0.13	-0.7
2,969,536	-		LRK53_RS13440	0.13	-0.8
2,969,536	-		LRK53_RS13440	0.13	-0.1
2,969,536	-		LRK53_RS13440	0.13	+0.0
2,969,597	+		LRK53_RS13440	0.20	-1.0
2,969,667	+		LRK53_RS13440	0.28	+0.5
2,969,667	+		LRK53_RS13440	0.28	+0.9
2,969,667	+		LRK53_RS13440	0.28	+0.2
2,969,667	+		LRK53_RS13440	0.28	+0.3
2,969,667	+		LRK53_RS13440	0.28	-0.8
2,969,667	+		LRK53_RS13440	0.28	-0.3
2,969,667	+		LRK53_RS13440	0.28	-1.0
2,969,667	+		LRK53_RS13440	0.28	+0.3
2,969,667	+		LRK53_RS13440	0.28	-0.6
2,969,667	+		LRK53_RS13440	0.28	-0.7
2,969,667	+		LRK53_RS13440	0.28	+0.3
2,969,667	+		LRK53_RS13440	0.28	-0.1
2,969,667	+		LRK53_RS13440	0.28	+0.3
2,969,667	+		LRK53_RS13440	0.28	-0.3
2,969,668	-		LRK53_RS13440	0.28	+0.5
2,969,668	-		LRK53_RS13440	0.28	-0.3
2,969,668	-		LRK53_RS13440	0.28	-2.7
2,969,668	-		LRK53_RS13440	0.28	-0.5
2,969,668	-		LRK53_RS13440	0.28	-0.5
2,969,668	-		LRK53_RS13440	0.28	-1.0
2,969,668	-		LRK53_RS13440	0.28	-0.0
2,969,668	-		LRK53_RS13440	0.28	+0.2
2,969,820	+		LRK53_RS13440	0.46	-0.4
2,969,820	+		LRK53_RS13440	0.46	+0.7
2,969,820	+		LRK53_RS13440	0.46	-0.4
2,969,820	+		LRK53_RS13440	0.46	-0.5
2,969,820	+		LRK53_RS13440	0.46	-2.4
2,969,820	+		LRK53_RS13440	0.46	-1.9
2,969,820	+		LRK53_RS13440	0.46	-0.3
2,969,820	+		LRK53_RS13440	0.46	-1.7
2,969,820	+		LRK53_RS13440	0.46	+0.5
2,969,820	+		LRK53_RS13440	0.46	+0.7
2,969,820	+		LRK53_RS13440	0.46	+0.3
2,969,820	+		LRK53_RS13440	0.46	+1.5
2,969,820	+		LRK53_RS13440	0.46	-0.9
2,969,820	+		LRK53_RS13440	0.46	-2.4
2,969,820	+		LRK53_RS13440	0.46	+0.7
2,969,820	+		LRK53_RS13440	0.46	-1.0
2,969,820	+		LRK53_RS13440	0.46	-0.3
2,969,820	+		LRK53_RS13440	0.46	-1.0
2,969,821	-		LRK53_RS13440	0.46	+0.1
2,969,821	-		LRK53_RS13440	0.46	-1.7
2,969,821	-		LRK53_RS13440	0.46	+1.3
2,969,821	-		LRK53_RS13440	0.46	+0.3
2,969,821	-		LRK53_RS13440	0.46	+0.3
2,969,821	-		LRK53_RS13440	0.46	+0.1
2,969,821	-		LRK53_RS13440	0.46	+0.7
2,969,821	-		LRK53_RS13440	0.46	-1.5
2,969,821	-		LRK53_RS13440	0.46	+0.3
2,969,821	-		LRK53_RS13440	0.46	-0.8
2,969,821	-		LRK53_RS13440	0.46	-0.6
2,969,821	-		LRK53_RS13440	0.46	-1.0
2,969,821	-		LRK53_RS13440	0.46	-1.1
2,969,821	-		LRK53_RS13440	0.46	-0.5
2,969,821	-		LRK53_RS13440	0.46	-1.5
2,969,821	-		LRK53_RS13440	0.46	-0.7
2,969,821	-		LRK53_RS13440	0.46	-0.7
2,969,821	-		LRK53_RS13440	0.46	+0.8
2,969,927	+		LRK53_RS13440	0.59	-0.1
2,969,927	+		LRK53_RS13440	0.59	+0.1
2,969,927	+		LRK53_RS13440	0.59	+0.2
2,969,927	+		LRK53_RS13440	0.59	-0.3
2,969,928	-		LRK53_RS13440	0.59	-0.3
2,969,928	-		LRK53_RS13440	0.59	-0.2
2,969,928	-		LRK53_RS13440	0.59	-0.2
2,969,928	-		LRK53_RS13440	0.59	+0.7
2,969,928	-		LRK53_RS13440	0.59	-0.9
2,969,928	-		LRK53_RS13440	0.59	+0.0
2,969,928	-		LRK53_RS13440	0.59	+1.3
2,969,928	-		LRK53_RS13440	0.59	-0.3
2,969,928	-		LRK53_RS13440	0.59	+0.8
2,969,991	+		LRK53_RS13440	0.66	-1.4
2,969,991	+		LRK53_RS13440	0.66	-1.9
2,969,992	-		LRK53_RS13440	0.66	-0.6
2,969,992	-		LRK53_RS13440	0.66	-0.9
2,969,992	-		LRK53_RS13440	0.66	+1.3
2,970,159	+		LRK53_RS13440	0.86	-1.7
2,970,159	+		LRK53_RS13440	0.86	+1.3
2,970,160	-		LRK53_RS13440	0.86	-0.1
2,970,160	-		LRK53_RS13440	0.86	-0.7
2,970,160	-		LRK53_RS13440	0.86	+1.3
2,970,160	-		LRK53_RS13440	0.86	-1.3
2,970,160	-		LRK53_RS13440	0.86	-0.8
2,970,305	+				-2.4
2,970,305	+				-0.8
2,970,305	+				+0.0
2,970,305	+				-0.4
2,970,305	+				+1.9
2,970,305	+				-0.0
2,970,305	+				-0.2
2,970,305	+				-0.0
2,970,305	+				+0.1
2,970,305	+				-0.4
2,970,305	+				+0.3
2,970,306	-				+0.3
2,970,306	-				+0.7
2,970,306	-				-0.6
2,970,306	-				-0.5
2,970,306	-				-0.1
2,970,306	-				+1.9
2,970,306	-				+2.3
2,970,306	-				+0.2
2,970,306	-				+0.3
2,970,306	-				-1.0
2,970,306	-				-0.1
2,970,393	+		LRK53_RS13445	0.15	-2.8
2,970,393	+		LRK53_RS13445	0.15	-0.5
2,970,393	+		LRK53_RS13445	0.15	-0.1
2,970,393	+		LRK53_RS13445	0.15	-0.5
2,970,393	+		LRK53_RS13445	0.15	-1.3
2,970,393	+		LRK53_RS13445	0.15	+0.6
2,970,393	+		LRK53_RS13445	0.15	-1.6
2,970,393	+		LRK53_RS13445	0.15	-0.3
2,970,393	+		LRK53_RS13445	0.15	-0.5
2,970,394	-		LRK53_RS13445	0.15	-0.9
2,970,394	-		LRK53_RS13445	0.15	-0.1
2,970,394	-		LRK53_RS13445	0.15	+2.3
2,970,394	-		LRK53_RS13445	0.15	-0.7
2,970,394	-		LRK53_RS13445	0.15	+0.3
2,970,394	-		LRK53_RS13445	0.15	+0.3
2,970,394	-		LRK53_RS13445	0.15	-0.8
2,970,394	-		LRK53_RS13445	0.15	-1.3
2,970,394	-		LRK53_RS13445	0.15	-3.9
2,970,394	-		LRK53_RS13445	0.15	-0.5
2,970,394	-		LRK53_RS13445	0.15	-2.0
2,970,394	-		LRK53_RS13445	0.15	+0.9
2,970,395	+		LRK53_RS13445	0.15	-0.8
2,970,395	+		LRK53_RS13445	0.15	-0.1
2,970,396	-		LRK53_RS13445	0.16	+1.0
2,970,396	-		LRK53_RS13445	0.16	-0.3
2,970,396	-		LRK53_RS13445	0.16	+1.3
2,970,473	+		LRK53_RS13445	0.25	-1.4
2,970,522	-		LRK53_RS13445	0.32	-1.5
2,970,522	-		LRK53_RS13445	0.32	-0.9
2,970,551	+		LRK53_RS13445	0.35	-0.0
2,970,552	-		LRK53_RS13445	0.36	-0.5
2,970,552	-		LRK53_RS13445	0.36	-1.9
2,970,976	+		LRK53_RS13445	0.90	-1.5
2,970,976	+		LRK53_RS13445	0.90	-0.8
2,970,977	-				-0.3
2,971,068	+				-0.1
2,971,068	+				-1.3
2,971,068	+				+0.8
2,971,069	-				-0.2
2,971,069	-				+0.1
2,971,069	-				+0.3
2,971,069	-				+0.4
2,971,083	+				-0.1
2,971,083	+				-1.3
2,971,083	+				+0.2
2,971,084	-				-2.7
2,971,084	-				-0.5
2,971,084	-				-0.7
2,971,084	-				-1.9
2,971,084	-				-1.7
2,971,341	+		LRK53_RS13450	0.35	+0.3
2,971,341	+		LRK53_RS13450	0.35	-1.5
2,971,341	+		LRK53_RS13450	0.35	+0.9
2,971,342	-		LRK53_RS13450	0.35	-0.3
2,971,342	-		LRK53_RS13450	0.35	-0.3
2,971,342	-		LRK53_RS13450	0.35	-1.5
2,971,342	-		LRK53_RS13450	0.35	+0.9
2,971,407	+		LRK53_RS13450	0.44	-0.5
2,971,407	+		LRK53_RS13450	0.44	-1.0
2,971,408	-		LRK53_RS13450	0.44	-1.5
2,971,408	-		LRK53_RS13450	0.44	-0.3
2,971,464	+		LRK53_RS13450	0.52	-0.6
2,971,464	+		LRK53_RS13450	0.52	+0.4
2,971,464	+		LRK53_RS13450	0.52	-0.4
2,971,464	+		LRK53_RS13450	0.52	-1.5
2,971,464	+		LRK53_RS13450	0.52	+0.3
2,971,464	+		LRK53_RS13450	0.52	+0.4
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	+4.1
2,971,464	+		LRK53_RS13450	0.52	+0.5
2,971,464	+		LRK53_RS13450	0.52	+0.5
2,971,464	+		LRK53_RS13450	0.52	-0.0
2,971,464	+		LRK53_RS13450	0.52	+0.0
2,971,464	+		LRK53_RS13450	0.52	-0.7
2,971,464	+		LRK53_RS13450	0.52	+0.7
2,971,464	+		LRK53_RS13450	0.52	-1.9
2,971,464	+		LRK53_RS13450	0.52	+0.1
2,971,464	+		LRK53_RS13450	0.52	-0.8
2,971,464	+		LRK53_RS13450	0.52	+0.8
2,971,464	+		LRK53_RS13450	0.52	+0.9
2,971,464	+		LRK53_RS13450	0.52	-2.0
2,971,464	+		LRK53_RS13450	0.52	+1.3
2,971,464	+		LRK53_RS13450	0.52	-0.3
2,971,464	+		LRK53_RS13450	0.52	-0.7
2,971,464	+		LRK53_RS13450	0.52	+0.1
2,971,464	+		LRK53_RS13450	0.52	-1.9
2,971,464	+		LRK53_RS13450	0.52	-1.7
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	-0.6
2,971,464	+		LRK53_RS13450	0.52	-0.8
2,971,464	+		LRK53_RS13450	0.52	-0.9
2,971,464	+		LRK53_RS13450	0.52	-1.0
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	-0.9
2,971,465	-		LRK53_RS13450	0.52	+0.1
2,971,465	-		LRK53_RS13450	0.52	-0.2
2,971,465	-		LRK53_RS13450	0.52	+1.3
2,971,465	-		LRK53_RS13450	0.52	-1.0
2,971,465	-		LRK53_RS13450	0.52	+0.3
2,971,465	-		LRK53_RS13450	0.52	-0.6
2,971,465	-		LRK53_RS13450	0.52	-1.3
2,971,465	-		LRK53_RS13450	0.52	+0.1
2,971,465	-		LRK53_RS13450	0.52	+0.3
2,971,465	-		LRK53_RS13450	0.52	-1.0
2,971,465	-		LRK53_RS13450	0.52	-0.3
2,971,465	-		LRK53_RS13450	0.52	+0.3
2,971,465	-		LRK53_RS13450	0.52	+1.3
2,971,465	-		LRK53_RS13450	0.52	-0.8
2,971,465	-		LRK53_RS13450	0.52	+0.2
2,971,465	-		LRK53_RS13450	0.52	+0.3
2,971,465	-		LRK53_RS13450	0.52	-1.4
2,971,599	+		LRK53_RS13450	0.70	+0.3
2,971,599	+		LRK53_RS13450	0.70	+0.7
2,971,599	+		LRK53_RS13450	0.70	+0.3
2,971,599	+		LRK53_RS13450	0.70	-1.4
2,971,600	-		LRK53_RS13450	0.70	+0.3
2,971,689	+		LRK53_RS13450	0.83	-0.7
2,971,859	+				-3.0
2,971,859	+				+1.3
2,971,860	-				+1.0
2,971,860	-				-0.2
2,971,860	-				-0.3
2,971,935	+				-0.8
2,971,935	+				+0.5
2,971,935	+				+0.2
2,971,936	-				-1.5
2,971,936	-				+0.5
2,971,936	-				-0.4
2,971,977	+				-0.0