Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11250

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,511,046	+				+0.1
2,511,047	-				-0.1
2,511,047	-				+1.7
2,511,047	-				-2.6
2,511,070	+		LRK53_RS11245	0.12	-1.1
2,511,070	+		LRK53_RS11245	0.12	-1.9
2,511,070	+		LRK53_RS11245	0.12	+0.5
2,511,070	+		LRK53_RS11245	0.12	-0.4
2,511,071	-		LRK53_RS11245	0.12	-1.3
2,511,071	-		LRK53_RS11245	0.12	-1.7
2,511,071	-		LRK53_RS11245	0.12	-0.6
2,511,071	-		LRK53_RS11245	0.12	-1.0
2,511,355	+		LRK53_RS11245	0.38	-2.6
2,511,355	+		LRK53_RS11245	0.38	+0.1
2,511,355	+		LRK53_RS11245	0.38	+0.2
2,511,356	-		LRK53_RS11245	0.38	-1.5
2,511,356	-		LRK53_RS11245	0.38	-1.3
2,511,356	-		LRK53_RS11245	0.38	+1.0
2,511,356	-		LRK53_RS11245	0.38	-0.2
2,511,439	+		LRK53_RS11245	0.46	+0.2
2,511,440	-		LRK53_RS11245	0.46	+0.1
2,511,440	-		LRK53_RS11245	0.46	+0.5
2,511,460	+		LRK53_RS11245	0.48	-0.3
2,511,461	-		LRK53_RS11245	0.48	-0.3
2,511,479	+		LRK53_RS11245	0.50	-1.9
2,511,480	-		LRK53_RS11245	0.50	-0.9
2,511,480	-		LRK53_RS11245	0.50	+0.3
2,511,503	-		LRK53_RS11245	0.52	-2.4
2,511,503	-		LRK53_RS11245	0.52	+0.6
2,511,688	+		LRK53_RS11245	0.69	-1.2
2,511,689	-		LRK53_RS11245	0.69	+3.3
2,511,788	+		LRK53_RS11245	0.78	+1.0
2,511,788	+		LRK53_RS11245	0.78	+0.3
2,511,789	-		LRK53_RS11245	0.78	-1.3
2,511,789	-		LRK53_RS11245	0.78	+1.0
2,511,789	-		LRK53_RS11245	0.78	-0.4
2,511,832	+		LRK53_RS11245	0.82	-1.7
2,511,833	-		LRK53_RS11245	0.83	+0.7
2,511,833	-		LRK53_RS11245	0.83	-0.1
2,511,833	-		LRK53_RS11245	0.83	-0.5
2,512,068	+				+0.3
2,512,068	+				-0.4
2,512,068	+				-1.2
2,512,069	-				-0.9
2,512,069	-				+1.3
2,512,069	-				-0.5
2,512,167	+		LRK53_RS11250	0.20	+0.1
2,512,167	+		LRK53_RS11250	0.20	-1.0
2,512,167	+		LRK53_RS11250	0.20	-0.2
2,512,167	+		LRK53_RS11250	0.20	-0.3
2,512,167	+		LRK53_RS11250	0.20	-1.7
2,512,167	+		LRK53_RS11250	0.20	+0.1
2,512,167	+		LRK53_RS11250	0.20	-0.7
2,512,167	+		LRK53_RS11250	0.20	-1.6
2,512,167	+		LRK53_RS11250	0.20	+0.7
2,512,167	+		LRK53_RS11250	0.20	+0.1
2,512,167	+		LRK53_RS11250	0.20	-3.3
2,512,167	+		LRK53_RS11250	0.20	+1.0
2,512,167	+		LRK53_RS11250	0.20	+0.9
2,512,167	+		LRK53_RS11250	0.20	+0.7
2,512,167	+		LRK53_RS11250	0.20	-0.6
2,512,167	+		LRK53_RS11250	0.20	-0.7
2,512,167	+		LRK53_RS11250	0.20	+0.2
2,512,167	+		LRK53_RS11250	0.20	-1.7
2,512,167	+		LRK53_RS11250	0.20	-1.9
2,512,167	+		LRK53_RS11250	0.20	-0.4
2,512,167	+		LRK53_RS11250	0.20	-0.0
2,512,167	+		LRK53_RS11250	0.20	+0.2
2,512,167	+		LRK53_RS11250	0.20	-0.5
2,512,167	+		LRK53_RS11250	0.20	-0.1
2,512,167	+		LRK53_RS11250	0.20	+1.3
2,512,167	+		LRK53_RS11250	0.20	-0.5
2,512,167	+		LRK53_RS11250	0.20	+0.3
2,512,167	+		LRK53_RS11250	0.20	-2.4
2,512,167	+		LRK53_RS11250	0.20	-0.7
2,512,168	-		LRK53_RS11250	0.21	-1.6
2,512,168	-		LRK53_RS11250	0.21	-0.0
2,512,168	-		LRK53_RS11250	0.21	-0.1
2,512,168	-		LRK53_RS11250	0.21	-1.5
2,512,168	-		LRK53_RS11250	0.21	-0.6
2,512,168	-		LRK53_RS11250	0.21	-1.2
2,512,168	-		LRK53_RS11250	0.21	-0.9
2,512,168	-		LRK53_RS11250	0.21	+0.3
2,512,168	-		LRK53_RS11250	0.21	-0.4
2,512,168	-		LRK53_RS11250	0.21	-1.6
2,512,168	-		LRK53_RS11250	0.21	-0.3
2,512,168	-		LRK53_RS11250	0.21	+0.2
2,512,168	-		LRK53_RS11250	0.21	-1.5
2,512,168	-		LRK53_RS11250	0.21	+0.1
2,512,168	-		LRK53_RS11250	0.21	-0.3
2,512,168	-		LRK53_RS11250	0.21	-1.3
2,512,168	-		LRK53_RS11250	0.21	-1.0
2,512,168	-		LRK53_RS11250	0.21	-0.4
2,512,168	-		LRK53_RS11250	0.21	-0.3
2,512,168	-		LRK53_RS11250	0.21	-0.6
2,512,168	-		LRK53_RS11250	0.21	+0.3
2,512,168	-		LRK53_RS11250	0.21	+2.3
2,512,233	+		LRK53_RS11250	0.30	-0.8
2,512,234	-		LRK53_RS11250	0.30	-0.3
2,512,234	-		LRK53_RS11250	0.30	-2.5
2,512,239	+		LRK53_RS11250	0.30	-1.2
2,512,239	+		LRK53_RS11250	0.30	-1.0
2,512,290	+		LRK53_RS11250	0.37	-0.5
2,512,290	+		LRK53_RS11250	0.37	-0.1
2,512,290	+		LRK53_RS11250	0.37	-0.3
2,512,290	+		LRK53_RS11250	0.37	-0.8
2,512,428	+		LRK53_RS11250	0.56	-0.1
2,512,428	+		LRK53_RS11250	0.56	+1.3
2,512,429	-		LRK53_RS11250	0.56	+2.3
2,512,429	-		LRK53_RS11250	0.56	+0.6
2,512,443	+		LRK53_RS11250	0.58	+0.3
2,512,443	+		LRK53_RS11250	0.58	+0.3
2,512,443	+		LRK53_RS11250	0.58	-1.3
2,512,443	+		LRK53_RS11250	0.58	-1.1
2,512,443	+		LRK53_RS11250	0.58	-0.9
2,512,444	-		LRK53_RS11250	0.58	+0.7
2,512,444	-		LRK53_RS11250	0.58	-0.9
2,512,444	-		LRK53_RS11250	0.58	-0.7
2,512,444	-		LRK53_RS11250	0.58	+0.3
2,512,444	-		LRK53_RS11250	0.58	+0.3
2,512,467	+		LRK53_RS11250	0.61	-2.2
2,512,467	+		LRK53_RS11250	0.61	+0.6
2,512,467	+		LRK53_RS11250	0.61	+1.3
2,512,468	-		LRK53_RS11250	0.62	-0.1
2,512,468	-		LRK53_RS11250	0.62	-1.0
2,512,468	-		LRK53_RS11250	0.62	-0.6
2,512,468	-		LRK53_RS11250	0.62	+0.3
2,512,468	-		LRK53_RS11250	0.62	+1.0
2,512,716	-				-1.0
2,512,716	-				-1.4
2,512,991	+		LRK53_RS11255	0.37	+0.1
2,512,992	-		LRK53_RS11255	0.38	-0.1
2,513,123	+		LRK53_RS11255	0.58	-0.5
2,513,208	+		LRK53_RS11255	0.70	-0.3
2,513,499	+		LRK53_RS11260	0.17	+1.3
2,513,512	+		LRK53_RS11260	0.19	-0.8
2,513,512	+		LRK53_RS11260	0.19	-1.0
2,513,513	-		LRK53_RS11260	0.19	-0.3
2,513,513	-		LRK53_RS11260	0.19	+1.3
2,513,513	-		LRK53_RS11260	0.19	-2.2
2,513,513	-		LRK53_RS11260	0.19	-0.3
2,513,526	+		LRK53_RS11260	0.21	-2.8
2,513,527	-		LRK53_RS11260	0.21	-0.1
2,513,527	-		LRK53_RS11260	0.21	+0.3
2,513,527	-		LRK53_RS11260	0.21	-1.0