Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10240

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,288,263	+		LRK53_RS10235	0.40	-1.4
2,288,263	+		LRK53_RS10235	0.40	-0.5
2,288,263	+		LRK53_RS10235	0.40	+0.7
2,288,263	+		LRK53_RS10235	0.40	-1.4
2,288,264	-		LRK53_RS10235	0.40	+0.4
2,288,264	-		LRK53_RS10235	0.40	-1.0
2,288,264	-		LRK53_RS10235	0.40	-0.0
2,288,264	-		LRK53_RS10235	0.40	-0.7
2,288,264	-		LRK53_RS10235	0.40	-1.0
2,288,264	-		LRK53_RS10235	0.40	+1.3
2,288,264	-		LRK53_RS10235	0.40	-1.5
2,288,264	-		LRK53_RS10235	0.40	-0.0
2,288,264	-		LRK53_RS10235	0.40	-1.0
2,288,264	-		LRK53_RS10235	0.40	-1.2
2,288,264	-		LRK53_RS10235	0.40	-0.3
2,288,360	+		LRK53_RS10235	0.50	+0.6
2,288,781	-				-1.7
2,289,035	+				-0.0
2,289,036	-				-0.3
2,289,036	-				+0.9
2,289,036	-				-1.7
2,289,036	-				-0.0
2,289,036	-				+3.6
2,289,069	+				-0.7
2,289,069	+				+0.4
2,289,070	-				+0.3
2,289,070	-				+0.9
2,289,070	-				-1.9
2,289,142	+				-1.2
2,289,143	-				+0.6
2,289,219	+				-0.0
2,289,219	+				+0.8
2,289,220	-				+1.6
2,289,220	-				-0.5
2,289,220	-				+0.0
2,289,220	-				+0.3
2,289,220	-				-0.5
2,289,231	+				-1.9
2,289,231	+				+0.7
2,289,231	+				-1.7
2,289,231	+				-0.4
2,289,231	+				-0.2
2,289,231	+				-2.0
2,289,231	+				+0.8
2,289,231	+				-1.0
2,289,231	+				-0.2
2,289,231	+				+0.3
2,289,232	-				-0.4
2,289,232	-				-0.7
2,289,232	-				-2.0
2,289,232	-				-0.7
2,289,232	-				+0.1
2,289,232	-				+0.6
2,289,232	-				+0.4
2,289,277	+		LRK53_RS10240	0.13	+0.6
2,289,277	+		LRK53_RS10240	0.13	-1.3
2,289,278	-		LRK53_RS10240	0.13	-0.7
2,289,278	-		LRK53_RS10240	0.13	-1.3
2,289,281	+		LRK53_RS10240	0.14	-1.3
2,289,282	-		LRK53_RS10240	0.14	+0.3
2,289,363	+		LRK53_RS10240	0.27	-1.3
2,289,363	+		LRK53_RS10240	0.27	+2.0
2,289,363	+		LRK53_RS10240	0.27	-0.3
2,289,363	+		LRK53_RS10240	0.27	+0.2
2,289,363	+		LRK53_RS10240	0.27	-0.8
2,289,363	+		LRK53_RS10240	0.27	-0.1
2,289,363	+		LRK53_RS10240	0.27	-1.0
2,289,363	+		LRK53_RS10240	0.27	-1.5
2,289,363	+		LRK53_RS10240	0.27	-1.0
2,289,363	+		LRK53_RS10240	0.27	+0.3
2,289,363	+		LRK53_RS10240	0.27	-0.0
2,289,363	+		LRK53_RS10240	0.27	+0.6
2,289,363	+		LRK53_RS10240	0.27	+0.3
2,289,363	+		LRK53_RS10240	0.27	+1.1
2,289,363	+		LRK53_RS10240	0.27	+0.3
2,289,363	+		LRK53_RS10240	0.27	+1.0
2,289,363	+		LRK53_RS10240	0.27	-0.7
2,289,363	+		LRK53_RS10240	0.27	-0.3
2,289,363	+		LRK53_RS10240	0.27	+0.3
2,289,363	+		LRK53_RS10240	0.27	-0.2
2,289,363	+		LRK53_RS10240	0.27	-1.3
2,289,363	+		LRK53_RS10240	0.27	-1.0
2,289,363	+		LRK53_RS10240	0.27	+0.5
2,289,363	+		LRK53_RS10240	0.27	-0.2
2,289,363	+		LRK53_RS10240	0.27	-1.0
2,289,363	+		LRK53_RS10240	0.27	+0.7
2,289,363	+		LRK53_RS10240	0.27	-0.5
2,289,363	+		LRK53_RS10240	0.27	+0.7
2,289,363	+		LRK53_RS10240	0.27	-1.7
2,289,363	+		LRK53_RS10240	0.27	+0.3
2,289,363	+		LRK53_RS10240	0.27	+1.3
2,289,363	+		LRK53_RS10240	0.27	+1.3
2,289,363	+		LRK53_RS10240	0.27	+1.7
2,289,363	+		LRK53_RS10240	0.27	+1.3
2,289,363	+		LRK53_RS10240	0.27	-0.1
2,289,363	+		LRK53_RS10240	0.27	-0.3
2,289,363	+		LRK53_RS10240	0.27	+0.2
2,289,363	+		LRK53_RS10240	0.27	-0.7
2,289,363	+		LRK53_RS10240	0.27	-0.7
2,289,363	+		LRK53_RS10240	0.27	+2.5
2,289,363	+		LRK53_RS10240	0.27	+0.3
2,289,363	+		LRK53_RS10240	0.27	-0.0
2,289,363	+		LRK53_RS10240	0.27	-1.0
2,289,363	+		LRK53_RS10240	0.27	+2.9
2,289,363	+		LRK53_RS10240	0.27	+0.6
2,289,363	+		LRK53_RS10240	0.27	+0.7
2,289,363	+		LRK53_RS10240	0.27	-0.7
2,289,363	+		LRK53_RS10240	0.27	+1.1
2,289,363	+		LRK53_RS10240	0.27	+1.3
2,289,363	+		LRK53_RS10240	0.27	-0.4
2,289,363	+		LRK53_RS10240	0.27	+2.3
2,289,363	+		LRK53_RS10240	0.27	-2.4
2,289,363	+		LRK53_RS10240	0.27	+0.3
2,289,363	+		LRK53_RS10240	0.27	+0.0
2,289,363	+		LRK53_RS10240	0.27	+0.9
2,289,363	+		LRK53_RS10240	0.27	+0.4
2,289,363	+		LRK53_RS10240	0.27	-0.3
2,289,363	+		LRK53_RS10240	0.27	+1.1
2,289,363	+		LRK53_RS10240	0.27	-1.4
2,289,363	+		LRK53_RS10240	0.27	+1.6
2,289,363	+		LRK53_RS10240	0.27	+0.6
2,289,363	+		LRK53_RS10240	0.27	-0.4
2,289,363	+		LRK53_RS10240	0.27	-1.0
2,289,363	+		LRK53_RS10240	0.27	+1.1
2,289,363	+		LRK53_RS10240	0.27	-1.2
2,289,364	-		LRK53_RS10240	0.27	+1.3
2,289,364	-		LRK53_RS10240	0.27	-2.0
2,289,364	-		LRK53_RS10240	0.27	+0.7
2,289,364	-		LRK53_RS10240	0.27	-0.7
2,289,364	-		LRK53_RS10240	0.27	+1.3
2,289,364	-		LRK53_RS10240	0.27	+0.4
2,289,364	-		LRK53_RS10240	0.27	-0.5
2,289,364	-		LRK53_RS10240	0.27	-0.4
2,289,364	-		LRK53_RS10240	0.27	-0.2
2,289,364	-		LRK53_RS10240	0.27	-1.1
2,289,364	-		LRK53_RS10240	0.27	-0.5
2,289,364	-		LRK53_RS10240	0.27	+0.3
2,289,364	-		LRK53_RS10240	0.27	+0.1
2,289,364	-		LRK53_RS10240	0.27	-0.7
2,289,364	-		LRK53_RS10240	0.27	-1.1
2,289,364	-		LRK53_RS10240	0.27	-0.1
2,289,364	-		LRK53_RS10240	0.27	+0.3
2,289,364	-		LRK53_RS10240	0.27	-1.5
2,289,364	-		LRK53_RS10240	0.27	-0.7
2,289,364	-		LRK53_RS10240	0.27	-0.2
2,289,364	-		LRK53_RS10240	0.27	-0.9
2,289,364	-		LRK53_RS10240	0.27	-1.0
2,289,364	-		LRK53_RS10240	0.27	+0.3
2,289,364	-		LRK53_RS10240	0.27	-0.3
2,289,364	-		LRK53_RS10240	0.27	+0.1
2,289,364	-		LRK53_RS10240	0.27	-1.9
2,289,364	-		LRK53_RS10240	0.27	-0.9
2,289,364	-		LRK53_RS10240	0.27	-0.7
2,289,364	-		LRK53_RS10240	0.27	-1.9
2,289,364	-		LRK53_RS10240	0.27	-0.3
2,289,364	-		LRK53_RS10240	0.27	+0.3
2,289,364	-		LRK53_RS10240	0.27	+0.3
2,289,364	-		LRK53_RS10240	0.27	-1.0
2,289,364	-		LRK53_RS10240	0.27	+1.0
2,289,364	-		LRK53_RS10240	0.27	-1.5
2,289,364	-		LRK53_RS10240	0.27	-0.1
2,289,364	-		LRK53_RS10240	0.27	+2.3
2,289,364	-		LRK53_RS10240	0.27	+0.2
2,289,368	+		LRK53_RS10240	0.28	-1.6
2,289,369	-		LRK53_RS10240	0.28	-0.1
2,289,369	-		LRK53_RS10240	0.28	-0.3
2,289,369	-		LRK53_RS10240	0.28	-1.5
2,289,369	-		LRK53_RS10240	0.28	-0.0
2,289,383	+		LRK53_RS10240	0.30	-0.5
2,289,384	-		LRK53_RS10240	0.30	-0.3
2,289,384	-		LRK53_RS10240	0.30	+0.5
2,289,520	+		LRK53_RS10240	0.52	+0.3
2,289,520	+		LRK53_RS10240	0.52	+0.8
2,289,520	+		LRK53_RS10240	0.52	-1.7
2,289,520	+		LRK53_RS10240	0.52	-0.7
2,289,520	+		LRK53_RS10240	0.52	-1.0
2,289,520	+		LRK53_RS10240	0.52	-1.3
2,289,520	+		LRK53_RS10240	0.52	-0.4
2,289,521	-		LRK53_RS10240	0.52	-0.7
2,289,521	-		LRK53_RS10240	0.52	+0.3
2,289,521	-		LRK53_RS10240	0.52	-1.0
2,289,521	-		LRK53_RS10240	0.52	+0.1
2,289,521	-		LRK53_RS10240	0.52	-0.2
2,289,521	-		LRK53_RS10240	0.52	+0.1
2,289,521	-		LRK53_RS10240	0.52	-0.4
2,289,521	-		LRK53_RS10240	0.52	-2.4
2,289,521	-		LRK53_RS10240	0.52	+0.5
2,289,521	-		LRK53_RS10240	0.52	-1.8
2,289,521	-		LRK53_RS10240	0.52	+0.2
2,289,521	-		LRK53_RS10240	0.52	-0.2
2,289,521	-		LRK53_RS10240	0.52	-0.6
2,289,523	-		LRK53_RS10240	0.53	-1.3
2,289,540	+		LRK53_RS10240	0.55	-0.0
2,289,541	-		LRK53_RS10240	0.56	+0.1
2,289,541	-		LRK53_RS10240	0.56	-1.9
2,289,541	-		LRK53_RS10240	0.56	-0.1
2,289,557	+		LRK53_RS10240	0.58	-0.6
2,289,558	-		LRK53_RS10240	0.58	-0.0
2,289,644	-		LRK53_RS10240	0.72	-2.3
2,289,769	+				-1.0
2,289,769	+				+0.3
2,289,769	+				-0.1
2,289,769	+				+2.9
2,289,769	+				-1.2
2,289,769	+				+1.1
2,289,770	-				+0.3
2,289,770	-				+0.5
2,289,770	-				-1.7
2,289,770	-				+0.6
2,289,814	+				-0.6
2,289,814	+				+0.3
2,289,814	+				-2.7
2,289,815	-				-1.3
2,289,815	-				-1.5
2,289,815	-				+0.0
2,289,829	+				-1.3
2,289,830	-				+0.1
2,289,830	-				-0.4
2,289,836	+				-2.0
2,289,836	+				+1.9
2,289,837	-				-0.7
2,289,837	-				-0.6
2,289,840	+				-1.9
2,289,840	+				-0.9
2,289,841	-				-0.5
2,289,841	-				+0.3
2,289,841	-				+0.2
2,289,841	-				+0.0
2,289,841	-				+1.3
2,289,841	-				-0.3
2,289,841	-				-2.5
2,289,841	-				-0.8
2,289,858	+				-0.9
2,289,858	+				-1.2
2,289,858	+				-1.3
2,289,858	+				+0.3
2,289,858	+				+0.1
2,289,858	+				-2.5
2,289,859	-				+0.9
2,289,859	-				-1.0
2,289,859	-				+1.3
2,289,862	+				-1.2
2,289,862	+				+0.3
2,289,862	+				+0.7
2,289,862	+				-0.1
2,289,862	+				-1.5
2,289,862	+				+1.6
2,289,862	+				-0.0
2,289,862	+				-2.2
2,289,862	+				+0.3
2,289,862	+				+3.6
2,289,862	+				+0.2
2,289,862	+				-0.4
2,289,863	-				-0.1
2,289,863	-				+0.2
2,289,863	-				+0.2
2,289,863	-				-2.0
2,289,863	-				-1.5
2,289,863	-				-1.3
2,289,863	-				-0.4
2,289,863	-				-2.7
2,289,863	-				-1.4
2,289,898	+				+0.6
2,289,900	+				-0.7
2,289,900	+				-0.5
2,289,900	+				-0.3
2,289,901	-				-1.5
2,289,901	-				+0.1
2,289,913	+				+1.3
2,289,920	+				-0.3
2,289,920	+				+0.3
2,289,920	+				-2.4
2,289,920	+				+0.1
2,289,920	+				-1.7
2,289,920	+				+2.5
2,289,920	+				+0.5
2,289,921	-				+1.3
2,289,921	-				+0.5
2,289,921	-				-0.2
2,289,921	-				-1.2
2,289,938	-				-0.5
2,289,964	+				-1.2
2,289,964	+				-0.3
2,289,965	-				-0.3
2,290,004	+				+0.4
2,290,010	+				-1.5
2,290,016	+				+1.3
2,290,017	-				+1.3
2,290,097	+				-1.2
2,290,097	+				-2.4
2,290,097	+				+0.1
2,290,097	+				-0.0
2,290,097	+				-0.0
2,290,098	-				+0.4
2,290,098	-				-1.9
2,290,098	-				-0.9
2,290,430	+		LRK53_RS10245	0.51	-0.2
2,290,430	+		LRK53_RS10245	0.51	-0.7
2,290,430	+		LRK53_RS10245	0.51	-0.4
2,290,430	+		LRK53_RS10245	0.51	+1.1
2,290,431	-		LRK53_RS10245	0.51	+2.3
2,290,481	+		LRK53_RS10245	0.59	-0.7
2,290,481	+		LRK53_RS10245	0.59	+0.3
2,290,481	+		LRK53_RS10245	0.59	-0.0
2,290,481	+		LRK53_RS10245	0.59	-0.4
2,290,482	-		LRK53_RS10245	0.59	-1.7
2,290,482	-		LRK53_RS10245	0.59	+0.3
2,290,482	-		LRK53_RS10245	0.59	+1.9
2,290,613	+		LRK53_RS10245	0.78	-1.6
2,290,613	+		LRK53_RS10245	0.78	-0.6
2,290,614	-		LRK53_RS10245	0.78	+0.2
2,290,691	+		LRK53_RS10245	0.89	-1.6
2,290,692	-		LRK53_RS10245	0.89	-0.3
2,290,692	-		LRK53_RS10245	0.89	-0.7
2,290,692	-		LRK53_RS10245	0.89	+1.0
2,290,692	-		LRK53_RS10245	0.89	+0.8
2,290,692	-		LRK53_RS10245	0.89	+0.7
2,290,692	-		LRK53_RS10245	0.89	-0.3
2,290,692	-		LRK53_RS10245	0.89	-0.3
2,290,692	-		LRK53_RS10245	0.89	-0.3
2,290,763	+				+0.2