Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10225

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,285,181	+		LRK53_RS10220	0.55	+0.6
2,285,181	+		LRK53_RS10220	0.55	-0.4
2,285,181	+		LRK53_RS10220	0.55	-1.0
2,285,181	+		LRK53_RS10220	0.55	+0.1
2,285,181	+		LRK53_RS10220	0.55	-1.4
2,285,181	+		LRK53_RS10220	0.55	+0.0
2,285,181	+		LRK53_RS10220	0.55	-1.0
2,285,181	+		LRK53_RS10220	0.55	-1.6
2,285,181	+		LRK53_RS10220	0.55	+2.5
2,285,181	+		LRK53_RS10220	0.55	-1.4
2,285,182	-		LRK53_RS10220	0.55	+0.8
2,285,182	-		LRK53_RS10220	0.55	-0.5
2,285,182	-		LRK53_RS10220	0.55	+0.5
2,285,182	-		LRK53_RS10220	0.55	+0.4
2,285,182	-		LRK53_RS10220	0.55	-0.3
2,285,182	-		LRK53_RS10220	0.55	-0.8
2,285,182	-		LRK53_RS10220	0.55	-2.9
2,285,182	-		LRK53_RS10220	0.55	+0.9
2,285,182	-		LRK53_RS10220	0.55	+0.6
2,285,182	-		LRK53_RS10220	0.55	-0.3
2,285,247	+		LRK53_RS10220	0.60	+0.9
2,285,248	-		LRK53_RS10220	0.60	+1.3
2,285,268	+		LRK53_RS10220	0.62	-0.7
2,285,269	-		LRK53_RS10220	0.62	+0.3
2,285,335	+		LRK53_RS10220	0.67	-0.0
2,285,335	+		LRK53_RS10220	0.67	-0.3
2,285,335	+		LRK53_RS10220	0.67	-0.4
2,285,335	+		LRK53_RS10220	0.67	-0.5
2,285,336	-		LRK53_RS10220	0.67	+0.3
2,285,336	-		LRK53_RS10220	0.67	-0.5
2,285,448	+		LRK53_RS10220	0.76	+0.8
2,285,448	+		LRK53_RS10220	0.76	-0.1
2,285,448	+		LRK53_RS10220	0.76	-0.7
2,285,449	-		LRK53_RS10220	0.77	-1.0
2,285,449	-		LRK53_RS10220	0.77	-1.5
2,285,449	-		LRK53_RS10220	0.77	-1.0
2,285,523	+		LRK53_RS10220	0.83	-1.1
2,285,524	-		LRK53_RS10220	0.83	+1.3
2,285,636	-				+0.5
2,285,636	-				-1.0
2,285,753	+				-1.3
2,285,761	+				+0.7
2,285,818	-				-1.6
2,285,920	+				-0.0
2,285,920	+				+0.4
2,286,058	+		LRK53_RS10225	0.25	+1.3
2,286,058	+		LRK53_RS10225	0.25	-0.3
2,286,058	+		LRK53_RS10225	0.25	-0.3
2,286,059	-		LRK53_RS10225	0.25	-1.5
2,286,059	-		LRK53_RS10225	0.25	-0.3
2,286,100	+		LRK53_RS10225	0.31	+0.4
2,286,100	+		LRK53_RS10225	0.31	+0.3
2,286,100	+		LRK53_RS10225	0.31	-0.4
2,286,100	+		LRK53_RS10225	0.31	+0.7
2,286,100	+		LRK53_RS10225	0.31	+0.5
2,286,100	+		LRK53_RS10225	0.31	-1.4
2,286,100	+		LRK53_RS10225	0.31	+3.3
2,286,100	+		LRK53_RS10225	0.31	-0.3
2,286,100	+		LRK53_RS10225	0.31	+1.9
2,286,100	+		LRK53_RS10225	0.31	-1.0
2,286,100	+		LRK53_RS10225	0.31	+2.0
2,286,100	+		LRK53_RS10225	0.31	-0.3
2,286,100	+		LRK53_RS10225	0.31	-0.2
2,286,100	+		LRK53_RS10225	0.31	-0.9
2,286,100	+		LRK53_RS10225	0.31	-0.5
2,286,100	+		LRK53_RS10225	0.31	+0.3
2,286,101	-		LRK53_RS10225	0.31	+0.3
2,286,101	-		LRK53_RS10225	0.31	+0.5
2,286,101	-		LRK53_RS10225	0.31	-1.9
2,286,101	-		LRK53_RS10225	0.31	-0.4
2,286,101	-		LRK53_RS10225	0.31	-0.7
2,286,101	-		LRK53_RS10225	0.31	-0.4
2,286,101	-		LRK53_RS10225	0.31	+0.6
2,286,101	-		LRK53_RS10225	0.31	+0.3
2,286,101	-		LRK53_RS10225	0.31	+1.6
2,286,101	-		LRK53_RS10225	0.31	-0.0
2,286,101	-		LRK53_RS10225	0.31	-0.3
2,286,101	-		LRK53_RS10225	0.31	-0.5
2,286,101	-		LRK53_RS10225	0.31	-0.7
2,286,101	-		LRK53_RS10225	0.31	-0.7
2,286,101	-		LRK53_RS10225	0.31	+2.0
2,286,101	-		LRK53_RS10225	0.31	-1.0
2,286,101	-		LRK53_RS10225	0.31	+2.1
2,286,101	-		LRK53_RS10225	0.31	-2.2
2,286,101	-		LRK53_RS10225	0.31	-1.5
2,286,101	-		LRK53_RS10225	0.31	+1.1
2,286,101	-		LRK53_RS10225	0.31	+0.9
2,286,238	+		LRK53_RS10225	0.53	+1.3
2,286,238	+		LRK53_RS10225	0.53	-0.1
2,286,238	+		LRK53_RS10225	0.53	+1.3
2,286,239	-		LRK53_RS10225	0.53	+2.3
2,286,239	-		LRK53_RS10225	0.53	-0.2
2,286,239	-		LRK53_RS10225	0.53	-1.5
2,286,239	-		LRK53_RS10225	0.53	-1.5
2,286,260	-		LRK53_RS10225	0.57	+0.6
2,286,260	-		LRK53_RS10225	0.57	-0.8
2,286,394	+		LRK53_RS10225	0.78	-1.9
2,286,395	-		LRK53_RS10225	0.78	-1.2
2,286,395	-		LRK53_RS10225	0.78	-1.5
2,286,397	+		LRK53_RS10225	0.79	+0.5
2,286,398	-		LRK53_RS10225	0.79	-1.3
2,286,398	-		LRK53_RS10225	0.79	+1.3
2,286,501	+				-1.0
2,286,501	+				-0.3
2,286,501	+				-1.2
2,286,502	-				+0.2
2,286,615	+				+0.9
2,286,615	+				-1.0
2,286,615	+				-0.7
2,286,615	+				+0.5
2,286,615	+				-1.4
2,286,615	+				-0.9
2,286,615	+				-1.0
2,286,615	+				-0.6
2,286,615	+				+0.7
2,286,615	+				-0.6
2,286,615	+				+1.6
2,286,615	+				+1.3
2,286,616	-				-1.0
2,286,616	-				-0.5
2,286,616	-				-0.4
2,286,616	-				-0.3
2,286,616	-				-1.0
2,286,616	-				-0.2
2,286,616	-				+1.3
2,286,616	-				-1.3
2,286,616	-				-0.9
2,286,617	+				+2.3
2,286,619	+				+0.3
2,286,619	+				-0.5
2,286,620	-				+1.3
2,286,620	-				-0.4
2,286,620	-				-1.0
2,286,620	-				-1.2
2,286,620	-				-0.6
2,286,620	-				-0.7
2,286,620	-				-2.3
2,286,620	-				+0.7
2,286,620	-				-0.7
2,286,620	-				-0.3
2,286,620	-				-0.3
2,286,620	-				+1.6
2,286,620	-				-0.5
2,286,620	-				-0.7
2,286,620	-				-2.3
2,286,661	+		LRK53_RS10230	0.12	+1.9
2,286,661	+		LRK53_RS10230	0.12	-0.3
2,286,661	+		LRK53_RS10230	0.12	-0.6
2,286,662	-		LRK53_RS10230	0.12	-1.2
2,286,662	-		LRK53_RS10230	0.12	-1.5
2,286,662	-		LRK53_RS10230	0.12	-0.1
2,286,662	-		LRK53_RS10230	0.12	-1.4
2,286,674	+		LRK53_RS10230	0.13	-1.1
2,286,674	+		LRK53_RS10230	0.13	-0.3
2,286,675	-		LRK53_RS10230	0.13	-2.5
2,286,676	+		LRK53_RS10230	0.13	-0.7
2,286,752	-		LRK53_RS10230	0.19	+0.0
2,286,813	+		LRK53_RS10230	0.25	+0.6
2,286,813	+		LRK53_RS10230	0.25	+0.4
2,286,814	-		LRK53_RS10230	0.25	+0.4
2,286,814	-		LRK53_RS10230	0.25	+0.5
2,286,979	+		LRK53_RS10230	0.39	-1.2
2,286,979	+		LRK53_RS10230	0.39	+2.3
2,286,980	-		LRK53_RS10230	0.39	-0.3
2,287,012	+		LRK53_RS10230	0.42	-0.7
2,287,012	+		LRK53_RS10230	0.42	-1.2
2,287,012	+		LRK53_RS10230	0.42	-0.6
2,287,012	+		LRK53_RS10230	0.42	+2.0
2,287,012	+		LRK53_RS10230	0.42	+0.9
2,287,012	+		LRK53_RS10230	0.42	-1.0
2,287,012	+		LRK53_RS10230	0.42	-0.2
2,287,013	-		LRK53_RS10230	0.42	-0.1
2,287,013	-		LRK53_RS10230	0.42	+2.3
2,287,013	-		LRK53_RS10230	0.42	-0.0
2,287,013	-		LRK53_RS10230	0.42	+0.3
2,287,013	-		LRK53_RS10230	0.42	-0.3
2,287,013	-		LRK53_RS10230	0.42	-0.0
2,287,071	+		LRK53_RS10230	0.47	+0.6
2,287,071	+		LRK53_RS10230	0.47	-0.5
2,287,071	+		LRK53_RS10230	0.47	-0.7
2,287,071	+		LRK53_RS10230	0.47	-1.9
2,287,071	+		LRK53_RS10230	0.47	-0.7
2,287,072	-		LRK53_RS10230	0.47	-0.8
2,287,072	-		LRK53_RS10230	0.47	+0.3
2,287,072	-		LRK53_RS10230	0.47	-0.3
2,287,072	-		LRK53_RS10230	0.47	+0.7
2,287,072	-		LRK53_RS10230	0.47	+1.9
2,287,105	-		LRK53_RS10230	0.50	+0.9
2,287,185	+		LRK53_RS10230	0.57	-2.2
2,287,186	-		LRK53_RS10230	0.57	+0.3
2,287,186	-		LRK53_RS10230	0.57	+0.1
2,287,257	+		LRK53_RS10230	0.63	+2.9
2,287,258	-		LRK53_RS10230	0.63	-0.6
2,287,258	-		LRK53_RS10230	0.63	-0.3
2,287,275	+		LRK53_RS10230	0.64	+0.9
2,287,276	-		LRK53_RS10230	0.64	-0.4
2,287,419	+		LRK53_RS10230	0.77	-1.0
2,287,419	+		LRK53_RS10230	0.77	-0.5