Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10030

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,243,834	+		LRK53_RS10020	0.25	-0.7
2,243,834	+		LRK53_RS10020	0.25	-1.3
2,243,835	-		LRK53_RS10020	0.25	-0.0
2,243,883	+		LRK53_RS10020	0.34	-1.1
2,243,883	+		LRK53_RS10020	0.34	-1.1
2,243,883	+		LRK53_RS10020	0.34	-0.4
2,243,883	+		LRK53_RS10020	0.34	-2.3
2,243,883	+		LRK53_RS10020	0.34	-0.7
2,243,883	+		LRK53_RS10020	0.34	-0.3
2,243,883	+		LRK53_RS10020	0.34	-0.5
2,243,884	-		LRK53_RS10020	0.34	-2.3
2,243,884	-		LRK53_RS10020	0.34	-1.1
2,243,884	-		LRK53_RS10020	0.34	-1.3
2,243,884	-		LRK53_RS10020	0.34	+0.3
2,243,933	+		LRK53_RS10020	0.43	+0.3
2,243,933	+		LRK53_RS10020	0.43	-0.1
2,243,933	+		LRK53_RS10020	0.43	-1.1
2,243,933	+		LRK53_RS10020	0.43	-0.7
2,243,933	+		LRK53_RS10020	0.43	-1.2
2,243,934	-		LRK53_RS10020	0.44	+1.4
2,243,934	-		LRK53_RS10020	0.44	-0.9
2,243,934	-		LRK53_RS10020	0.44	-1.3
2,243,934	-		LRK53_RS10020	0.44	-0.8
2,243,975	+		LRK53_RS10020	0.51	+0.6
2,243,975	+		LRK53_RS10020	0.51	-0.6
2,243,976	-		LRK53_RS10020	0.51	-0.3
2,243,978	+		LRK53_RS10020	0.52	-1.3
2,243,978	+		LRK53_RS10020	0.52	-0.8
2,243,978	+		LRK53_RS10020	0.52	-1.0
2,243,978	+		LRK53_RS10020	0.52	+0.2
2,243,978	+		LRK53_RS10020	0.52	-1.3
2,243,978	+		LRK53_RS10020	0.52	+0.2
2,243,978	+		LRK53_RS10020	0.52	+0.4
2,243,978	+		LRK53_RS10020	0.52	-2.0
2,243,978	+		LRK53_RS10020	0.52	-2.0
2,243,979	-		LRK53_RS10020	0.52	-0.2
2,243,979	-		LRK53_RS10020	0.52	-0.5
2,243,979	-		LRK53_RS10020	0.52	-1.7
2,244,121	+		LRK53_RS10020	0.78	-0.6
2,244,122	-		LRK53_RS10020	0.79	-1.2
2,244,232	+				-1.2
2,244,273	+				+0.7
2,244,273	+				-1.0
2,244,274	-				+0.2
2,244,366	+				+0.9
2,244,367	-				+0.8
2,244,422	+				+1.0
2,244,422	+				+0.3
2,244,422	+				-0.2
2,244,422	+				-1.9
2,244,423	-				-0.0
2,244,423	-				-0.6
2,244,423	-				-0.3
2,244,423	-				-0.0
2,244,423	-				+1.3
2,244,423	-				+0.7
2,244,423	-				+1.6
2,244,433	+				+2.0
2,244,433	+				+1.3
2,244,433	+				+1.0
2,244,433	+				+0.7
2,244,433	+				+2.1
2,244,433	+				-1.9
2,244,433	+				-2.2
2,244,433	+				+1.3
2,244,433	+				+1.8
2,244,433	+				-0.0
2,244,433	+				+0.3
2,244,434	-				+1.3
2,244,434	-				-0.6
2,244,434	-				-0.7
2,244,434	-				+0.8
2,244,434	-				-1.0
2,244,663	+		LRK53_RS10025	0.50	-1.4
2,244,664	-		LRK53_RS10025	0.50	-1.5
2,244,664	-		LRK53_RS10025	0.50	-0.3
2,244,747	+		LRK53_RS10025	0.70	-1.2
2,244,747	+		LRK53_RS10025	0.70	-0.8
2,244,747	+		LRK53_RS10025	0.70	+0.4
2,244,748	-		LRK53_RS10025	0.70	-0.3
2,244,748	-		LRK53_RS10025	0.70	-0.4
2,244,748	-		LRK53_RS10025	0.70	+0.0
2,244,748	-		LRK53_RS10025	0.70	+0.8
2,244,748	-		LRK53_RS10025	0.70	+2.5
2,244,748	-		LRK53_RS10025	0.70	-1.5
2,244,748	-		LRK53_RS10025	0.70	+0.7
2,244,748	-		LRK53_RS10025	0.70	+0.6
2,244,757	+		LRK53_RS10025	0.72	-0.4
2,244,757	+		LRK53_RS10025	0.72	-0.7
2,244,757	+		LRK53_RS10025	0.72	-1.7
2,244,757	+		LRK53_RS10025	0.72	-0.3
2,244,757	+		LRK53_RS10025	0.72	+3.3
2,244,757	+		LRK53_RS10025	0.72	+1.0
2,244,757	+		LRK53_RS10025	0.72	-0.9
2,244,757	+		LRK53_RS10025	0.72	-1.3
2,244,757	+		LRK53_RS10025	0.72	-0.7
2,244,757	+		LRK53_RS10025	0.72	+2.3
2,244,757	+		LRK53_RS10025	0.72	+0.1
2,244,758	-		LRK53_RS10025	0.72	+1.5
2,244,758	-		LRK53_RS10025	0.72	-1.7
2,244,758	-		LRK53_RS10025	0.72	-0.3
2,244,758	-		LRK53_RS10025	0.72	-0.4
2,244,758	-		LRK53_RS10025	0.72	+0.1
2,244,758	-		LRK53_RS10025	0.72	-1.5
2,244,795	+		LRK53_RS10025	0.81	-0.1
2,244,795	+		LRK53_RS10025	0.81	-0.8
2,244,795	+		LRK53_RS10025	0.81	-1.3
2,244,795	+		LRK53_RS10025	0.81	-0.8
2,244,795	+		LRK53_RS10025	0.81	+0.6
2,244,796	-		LRK53_RS10025	0.81	-1.0
2,244,796	-		LRK53_RS10025	0.81	+1.9
2,244,796	-		LRK53_RS10025	0.81	-0.7
2,244,796	-		LRK53_RS10025	0.81	+2.9
2,244,796	-		LRK53_RS10025	0.81	-1.1
2,244,796	-		LRK53_RS10025	0.81	+1.3
2,244,796	-		LRK53_RS10025	0.81	-0.1
2,245,027	-		LRK53_RS10030	0.13	+1.3
2,245,099	-		LRK53_RS10030	0.17	-0.4
2,245,099	-		LRK53_RS10030	0.17	-2.4
2,245,153	+		LRK53_RS10030	0.21	+0.3
2,245,153	+		LRK53_RS10030	0.21	+1.3
2,245,154	-		LRK53_RS10030	0.21	-1.0
2,245,154	-		LRK53_RS10030	0.21	+1.3
2,245,258	+		LRK53_RS10030	0.28	+0.6
2,245,258	+		LRK53_RS10030	0.28	+0.1
2,245,258	+		LRK53_RS10030	0.28	-0.2
2,245,258	+		LRK53_RS10030	0.28	-0.3
2,245,258	+		LRK53_RS10030	0.28	-0.3
2,245,259	-		LRK53_RS10030	0.28	-1.7
2,245,259	-		LRK53_RS10030	0.28	-2.3
2,245,270	+		LRK53_RS10030	0.28	-0.3
2,245,271	-		LRK53_RS10030	0.28	+0.6
2,245,274	-		LRK53_RS10030	0.29	-0.2
2,245,274	-		LRK53_RS10030	0.29	-0.6
2,245,274	-		LRK53_RS10030	0.29	-0.7
2,245,325	-		LRK53_RS10030	0.32	-1.0
2,245,399	+		LRK53_RS10030	0.37	+1.3
2,245,399	+		LRK53_RS10030	0.37	-0.3
2,245,399	+		LRK53_RS10030	0.37	-0.3
2,245,399	+		LRK53_RS10030	0.37	+2.3
2,245,400	-		LRK53_RS10030	0.37	-0.8
2,245,400	-		LRK53_RS10030	0.37	+2.3
2,245,400	-		LRK53_RS10030	0.37	-2.2
2,245,400	-		LRK53_RS10030	0.37	+2.9
2,245,400	-		LRK53_RS10030	0.37	+0.3
2,245,400	-		LRK53_RS10030	0.37	-0.5
2,245,400	-		LRK53_RS10030	0.37	-1.4
2,245,426	+		LRK53_RS10030	0.38	+0.7
2,245,426	+		LRK53_RS10030	0.38	-1.5
2,245,427	-		LRK53_RS10030	0.38	-0.9
2,245,427	-		LRK53_RS10030	0.38	-1.4
2,245,583	-		LRK53_RS10030	0.49	-0.7
2,245,654	+		LRK53_RS10030	0.53	-0.7
2,245,654	+		LRK53_RS10030	0.53	+1.3
2,245,655	-		LRK53_RS10030	0.53	-1.0
2,245,655	-		LRK53_RS10030	0.53	-0.6
2,245,655	-		LRK53_RS10030	0.53	-1.5
2,245,655	-		LRK53_RS10030	0.53	-0.3
2,245,655	-		LRK53_RS10030	0.53	+1.3
2,245,756	+		LRK53_RS10030	0.60	+1.3
2,245,756	+		LRK53_RS10030	0.60	-0.5
2,245,756	+		LRK53_RS10030	0.60	-0.9
2,245,757	-		LRK53_RS10030	0.60	-0.1
2,245,757	-		LRK53_RS10030	0.60	-1.3
2,245,823	+		LRK53_RS10030	0.64	-0.2
2,245,855	+		LRK53_RS10030	0.66	-0.7
2,245,856	-		LRK53_RS10030	0.66	+0.7
2,245,901	+		LRK53_RS10030	0.69	+1.1
2,245,901	+		LRK53_RS10030	0.69	-0.4
2,245,901	+		LRK53_RS10030	0.69	+0.3
2,245,901	+		LRK53_RS10030	0.69	+1.6
2,245,901	+		LRK53_RS10030	0.69	+0.6
2,245,901	+		LRK53_RS10030	0.69	-0.4
2,245,901	+		LRK53_RS10030	0.69	-1.0
2,245,902	-		LRK53_RS10030	0.69	-0.3
2,245,902	-		LRK53_RS10030	0.69	+0.1
2,245,902	-		LRK53_RS10030	0.69	+0.1
2,245,902	-		LRK53_RS10030	0.69	-1.3
2,245,902	-		LRK53_RS10030	0.69	-1.5
2,245,902	-		LRK53_RS10030	0.69	-1.9
2,245,948	+		LRK53_RS10030	0.72	-0.3
2,245,948	+		LRK53_RS10030	0.72	-0.3
2,245,948	+		LRK53_RS10030	0.72	-2.4
2,245,949	-		LRK53_RS10030	0.72	-1.0
2,245,949	-		LRK53_RS10030	0.72	+0.7
2,245,949	-		LRK53_RS10030	0.72	-2.8
2,245,949	-		LRK53_RS10030	0.72	-1.1
2,245,949	-		LRK53_RS10030	0.72	-0.5
2,245,957	+		LRK53_RS10030	0.73	+0.3
2,245,958	-		LRK53_RS10030	0.73	-3.2
2,245,998	+		LRK53_RS10030	0.75	-0.7
2,245,998	+		LRK53_RS10030	0.75	+0.1
2,245,999	-		LRK53_RS10030	0.75	-0.4
2,246,033	+		LRK53_RS10030	0.78	-2.4
2,246,033	+		LRK53_RS10030	0.78	-0.8
2,246,033	+		LRK53_RS10030	0.78	-2.1
2,246,033	+		LRK53_RS10030	0.78	-1.8
2,246,034	-		LRK53_RS10030	0.78	+0.7
2,246,034	-		LRK53_RS10030	0.78	-1.2
2,246,034	-		LRK53_RS10030	0.78	-0.9
2,246,034	-		LRK53_RS10030	0.78	+0.3
2,246,453	-				-1.9
2,246,640	-		LRK53_RS10035	0.36	-0.6
2,246,852	+		LRK53_RS10035	0.87	-0.5
2,247,080	+				-0.8
2,247,081	-				+0.5
2,247,081	-				+0.3
2,247,081	-				-0.4
2,247,081	-				-1.2
2,247,081	-				-0.0
2,247,081	-				-1.3
2,247,112	+				-1.9
2,247,112	+				+1.1
2,247,112	+				-0.5
2,247,112	+				-0.5
2,247,112	+				-1.9
2,247,112	+				+0.3
2,247,112	+				+2.3
2,247,112	+				+0.5
2,247,112	+				-2.9
2,247,113	-				-0.3
2,247,113	-				-1.5
2,247,113	-				+2.3
2,247,113	-				-1.3
2,247,113	-				-0.6
2,247,113	-				-2.0
2,247,113	-				-0.3
2,247,142	-				+0.3
2,247,142	-				-1.3
2,247,142	-				-0.1
2,247,149	+				-0.5
2,247,149	+				-1.8
2,247,149	+				-2.0
2,247,149	+				-1.2
2,247,149	+				+0.3
2,247,149	+				+1.1
2,247,149	+				-1.1
2,247,149	+				-1.1
2,247,150	-				+0.3
2,247,150	-				-0.2
2,247,163	+				+0.3
2,247,163	+				+0.3
2,247,163	+				-1.6
2,247,163	+				-0.3
2,247,164	-				+0.9
2,247,164	-				+1.3
2,247,292	+		LRK53_RS10040	0.45	-1.3
2,247,293	-		LRK53_RS10040	0.46	-0.6
2,247,293	-		LRK53_RS10040	0.46	-0.9
2,247,376	-		LRK53_RS10040	0.74	+1.3