Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09505

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,135,253	+		LRK53_RS09500	0.26	-0.7
2,135,253	+		LRK53_RS09500	0.26	-0.7
2,135,253	+		LRK53_RS09500	0.26	-0.6
2,135,253	+		LRK53_RS09500	0.26	-1.9
2,135,253	+		LRK53_RS09500	0.26	-0.1
2,135,253	+		LRK53_RS09500	0.26	+2.3
2,135,253	+		LRK53_RS09500	0.26	-1.3
2,135,253	+		LRK53_RS09500	0.26	-0.4
2,135,254	-		LRK53_RS09500	0.26	-1.1
2,135,254	-		LRK53_RS09500	0.26	-0.1
2,135,254	-		LRK53_RS09500	0.26	-1.0
2,135,254	-		LRK53_RS09500	0.26	+0.1
2,135,254	-		LRK53_RS09500	0.26	-1.9
2,135,254	-		LRK53_RS09500	0.26	-0.7
2,135,254	-		LRK53_RS09500	0.26	-1.9
2,135,254	-		LRK53_RS09500	0.26	+2.9
2,135,254	-		LRK53_RS09500	0.26	-0.9
2,135,254	-		LRK53_RS09500	0.26	-0.7
2,135,254	-		LRK53_RS09500	0.26	-0.9
2,135,254	-		LRK53_RS09500	0.26	-0.0
2,135,254	-		LRK53_RS09500	0.26	-0.5
2,135,254	-		LRK53_RS09500	0.26	-0.6
2,135,640	+		LRK53_RS09500	0.63	+0.6
2,135,640	+		LRK53_RS09500	0.63	-1.6
2,135,640	+		LRK53_RS09500	0.63	-1.1
2,135,640	+		LRK53_RS09500	0.63	-2.6
2,135,640	+		LRK53_RS09500	0.63	-1.8
2,135,640	+		LRK53_RS09500	0.63	-0.4
2,135,640	+		LRK53_RS09500	0.63	-1.3
2,135,640	+		LRK53_RS09500	0.63	-1.0
2,135,640	+		LRK53_RS09500	0.63	-0.7
2,135,640	+		LRK53_RS09500	0.63	-1.5
2,135,641	-		LRK53_RS09500	0.63	-2.4
2,135,641	-		LRK53_RS09500	0.63	+0.1
2,135,641	-		LRK53_RS09500	0.63	+0.7
2,135,641	-		LRK53_RS09500	0.63	-0.3
2,135,641	-		LRK53_RS09500	0.63	-1.0
2,135,641	-		LRK53_RS09500	0.63	-2.4
2,135,641	-		LRK53_RS09500	0.63	+1.3
2,135,641	-		LRK53_RS09500	0.63	-0.6
2,135,641	-		LRK53_RS09500	0.63	-1.7
2,135,641	-		LRK53_RS09500	0.63	+1.3
2,135,641	-		LRK53_RS09500	0.63	+0.6
2,135,641	-		LRK53_RS09500	0.63	-0.3
2,135,641	-		LRK53_RS09500	0.63	-0.3
2,135,775	+		LRK53_RS09500	0.76	-1.0
2,135,775	+		LRK53_RS09500	0.76	+0.1
2,135,776	-		LRK53_RS09500	0.76	-0.4
2,135,776	-		LRK53_RS09500	0.76	+0.9
2,135,877	+		LRK53_RS09500	0.86	-0.7
2,135,877	+		LRK53_RS09500	0.86	-0.9
2,135,877	+		LRK53_RS09500	0.86	-0.6
2,135,877	+		LRK53_RS09500	0.86	-0.3
2,135,877	+		LRK53_RS09500	0.86	+0.6
2,135,877	+		LRK53_RS09500	0.86	-2.1
2,135,877	+		LRK53_RS09500	0.86	-1.5
2,135,877	+		LRK53_RS09500	0.86	+2.9
2,135,878	-		LRK53_RS09500	0.86	+1.3
2,135,878	-		LRK53_RS09500	0.86	-0.6
2,135,878	-		LRK53_RS09500	0.86	+0.5
2,135,878	-		LRK53_RS09500	0.86	+0.9
2,135,878	-		LRK53_RS09500	0.86	-0.1
2,135,878	-		LRK53_RS09500	0.86	-1.0
2,135,878	-		LRK53_RS09500	0.86	+0.3
2,135,878	-		LRK53_RS09500	0.86	+0.5
2,135,878	-		LRK53_RS09500	0.86	-1.3
2,135,878	-		LRK53_RS09500	0.86	-2.1
2,135,878	-		LRK53_RS09500	0.86	+0.5
2,135,878	-		LRK53_RS09500	0.86	+0.4
2,135,878	-		LRK53_RS09500	0.86	-0.2
2,136,043	+				+1.1
2,136,043	+				-0.3
2,136,044	-				-2.0
2,136,044	-				+0.3
2,136,044	-				-1.5
2,136,047	+				-0.6
2,136,048	-				-0.8
2,136,048	-				+0.5
2,136,058	+				-0.3
2,136,058	+				-0.5
2,136,059	-				-0.3
2,136,059	-				-1.5
2,136,059	-				+0.3
2,136,060	+				-0.5
2,136,060	+				-0.7
2,136,060	+				-1.8
2,136,060	+				-1.4
2,136,060	+				-1.3
2,136,060	+				+0.3
2,136,060	+				-1.0
2,136,060	+				-1.6
2,136,060	+				-1.3
2,136,060	+				+0.7
2,136,060	+				-0.6
2,136,060	+				-2.2
2,136,060	+				-1.4
2,136,060	+				+0.8
2,136,060	+				+1.0
2,136,060	+				-0.9
2,136,060	+				-0.7
2,136,060	+				-1.3
2,136,060	+				-0.6
2,136,060	+				+0.4
2,136,060	+				-2.4
2,136,060	+				+0.3
2,136,060	+				-2.7
2,136,060	+				+1.6
2,136,060	+				+0.5
2,136,060	+				-0.8
2,136,060	+				-0.7
2,136,060	+				+1.3
2,136,060	+				+1.1
2,136,060	+				-0.1
2,136,061	-				-1.7
2,136,061	-				-0.3
2,136,061	-				-1.3
2,136,061	-				-0.9
2,136,061	-				-2.1
2,136,061	-				+0.3
2,136,061	-				+0.3
2,136,061	-				+1.3
2,136,061	-				-0.7
2,136,061	-				-0.5
2,136,061	-				+0.7
2,136,061	-				-0.3
2,136,061	-				-1.3
2,136,061	-				-1.5
2,136,061	-				-1.0
2,136,061	-				-2.9
2,136,061	-				+0.7
2,136,061	-				-0.0
2,136,061	-				-1.9
2,136,061	-				-0.7
2,136,061	-				-1.6
2,136,123	-				-0.7
2,136,123	-				+0.7
2,136,123	-				-1.1
2,136,123	-				+0.1
2,136,123	-				+0.6
2,136,640	-		LRK53_RS09505	0.23	-1.3
2,136,652	+		LRK53_RS09505	0.23	+0.7
2,136,742	-		LRK53_RS09505	0.27	-0.7
2,136,913	+		LRK53_RS09505	0.35	+0.1
2,136,913	+		LRK53_RS09505	0.35	+0.7
2,136,913	+		LRK53_RS09505	0.35	-1.7
2,136,914	-		LRK53_RS09505	0.36	+0.2
2,136,914	-		LRK53_RS09505	0.36	-1.4
2,136,914	-		LRK53_RS09505	0.36	+0.7
2,136,914	-		LRK53_RS09505	0.36	+1.3
2,136,914	-		LRK53_RS09505	0.36	+2.3
2,136,914	-		LRK53_RS09505	0.36	+1.1
2,136,945	+		LRK53_RS09505	0.37	+1.3
2,136,987	+		LRK53_RS09505	0.39	-0.7
2,136,987	+		LRK53_RS09505	0.39	-0.7
2,136,987	+		LRK53_RS09505	0.39	-0.0
2,136,987	+		LRK53_RS09505	0.39	-0.6
2,136,987	+		LRK53_RS09505	0.39	+0.1
2,136,987	+		LRK53_RS09505	0.39	-1.0
2,136,987	+		LRK53_RS09505	0.39	+2.3
2,136,987	+		LRK53_RS09505	0.39	+0.9
2,136,987	+		LRK53_RS09505	0.39	+0.3
2,136,987	+		LRK53_RS09505	0.39	-0.7
2,136,988	-		LRK53_RS09505	0.39	-1.0
2,136,988	-		LRK53_RS09505	0.39	+0.7
2,136,988	-		LRK53_RS09505	0.39	-0.3
2,136,988	-		LRK53_RS09505	0.39	-2.4
2,136,988	-		LRK53_RS09505	0.39	+1.3
2,136,988	-		LRK53_RS09505	0.39	-0.8
2,136,988	-		LRK53_RS09505	0.39	-2.9
2,136,988	-		LRK53_RS09505	0.39	+1.7
2,136,988	-		LRK53_RS09505	0.39	+2.5
2,137,182	+		LRK53_RS09505	0.48	+1.3
2,137,183	-		LRK53_RS09505	0.48	-1.0
2,137,183	-		LRK53_RS09505	0.48	+0.3
2,137,183	-		LRK53_RS09505	0.48	+1.2
2,137,183	-		LRK53_RS09505	0.48	-0.2
2,137,189	-		LRK53_RS09505	0.48	+0.3
2,137,189	-		LRK53_RS09505	0.48	-0.2
2,137,189	-		LRK53_RS09505	0.48	+0.7
2,137,381	-		LRK53_RS09505	0.58	+0.4
2,137,381	-		LRK53_RS09505	0.58	+0.1
2,137,381	-		LRK53_RS09505	0.58	+0.3
2,137,467	+		LRK53_RS09505	0.62	-1.0
2,137,545	+		LRK53_RS09505	0.65	-0.9
2,137,545	+		LRK53_RS09505	0.65	-0.3
2,137,545	+		LRK53_RS09505	0.65	-1.3
2,137,546	-		LRK53_RS09505	0.65	-0.3
2,137,546	-		LRK53_RS09505	0.65	+0.7
2,137,546	-		LRK53_RS09505	0.65	+0.9
2,137,546	-		LRK53_RS09505	0.65	-0.5
2,137,674	+		LRK53_RS09505	0.71	-0.4
2,137,675	-		LRK53_RS09505	0.71	+0.4
2,137,675	-		LRK53_RS09505	0.71	-0.5
2,137,675	-		LRK53_RS09505	0.71	-0.7
2,137,675	-		LRK53_RS09505	0.71	-0.3
2,138,123	+				+0.3
2,138,123	+				-1.3
2,138,124	-				+0.6
2,138,124	-				+1.0
2,138,124	-				+0.6
2,138,124	-				-0.5
2,138,148	+				-0.4
2,138,148	+				-1.0
2,138,148	+				-0.5
2,138,149	-				+0.5
2,138,149	-				+0.9
2,138,149	-				+0.1
2,138,149	-				+0.7
2,138,192	+				-2.0
2,138,192	+				-1.9
2,138,193	-				+1.5
2,138,193	-				+0.3
2,138,236	+				-0.6
2,138,236	+				-0.1
2,138,236	+				+0.5
2,138,237	-				-1.4
2,138,237	-				-0.5
2,138,237	-				-2.6
2,138,237	-				+0.7
2,138,237	-				+1.1
2,138,237	-				-2.9
2,138,237	-				+2.9
2,138,348	+				+0.3
2,138,348	+				-0.7
2,138,348	+				+1.3
2,138,348	+				-0.0
2,138,348	+				+1.1
2,138,348	+				+0.1
2,138,348	+				+0.3
2,138,348	+				-1.8
2,138,349	-				-1.4
2,138,349	-				+1.3
2,138,349	-				-1.7
2,138,349	-				-1.1
2,138,349	-				-0.8
2,138,349	-				+1.7
2,138,349	-				-0.0
2,138,349	-				+1.3
2,138,349	-				-0.4
2,138,349	-				+0.1
2,138,349	-				+1.3
2,138,349	-				-0.7
2,138,349	-				-1.0
2,138,349	-				+0.3
2,138,381	+				-1.4
2,138,381	+				-1.9
2,138,381	+				-1.3
2,138,381	+				-0.9
2,138,381	+				-0.4
2,138,381	+				+1.3
2,138,381	+				-0.1
2,138,381	+				-1.0
2,138,381	+				+0.6
2,138,381	+				-0.3
2,138,381	+				-1.0
2,138,382	-				-0.3
2,138,382	-				-0.7
2,138,382	-				-0.7
2,138,382	-				+2.3
2,138,382	-				-0.4
2,138,382	-				+0.1
2,138,655	+		LRK53_RS09510	0.12	+0.7
2,138,655	+		LRK53_RS09510	0.12	-1.0
2,138,656	-		LRK53_RS09510	0.12	-1.0
2,138,656	-		LRK53_RS09510	0.12	-0.7
2,138,656	-		LRK53_RS09510	0.12	-1.4
2,138,656	-		LRK53_RS09510	0.12	-0.1
2,138,656	-		LRK53_RS09510	0.12	-1.5
2,138,656	-		LRK53_RS09510	0.12	-1.0
2,138,694	+		LRK53_RS09510	0.14	+0.1
2,138,694	+		LRK53_RS09510	0.14	+0.3
2,138,694	+		LRK53_RS09510	0.14	+0.8
2,138,694	+		LRK53_RS09510	0.14	+0.8
2,138,695	-		LRK53_RS09510	0.14	-1.0
2,138,695	-		LRK53_RS09510	0.14	-0.6
2,138,695	-		LRK53_RS09510	0.14	+0.7
2,138,820	+		LRK53_RS09510	0.20	-0.3
2,138,820	+		LRK53_RS09510	0.20	-0.0
2,138,821	-		LRK53_RS09510	0.20	-1.0
2,138,821	-		LRK53_RS09510	0.20	+0.3
2,138,823	+		LRK53_RS09510	0.20	-0.3
2,138,823	+		LRK53_RS09510	0.20	-1.3
2,138,823	+		LRK53_RS09510	0.20	-0.3
2,138,824	-		LRK53_RS09510	0.20	-0.2
2,138,824	-		LRK53_RS09510	0.20	+0.3
2,138,824	-		LRK53_RS09510	0.20	-1.0
2,138,910	+		LRK53_RS09510	0.24	-0.9
2,138,911	-		LRK53_RS09510	0.24	+0.9
2,138,925	+		LRK53_RS09510	0.25	-0.2
2,138,925	+		LRK53_RS09510	0.25	-0.7
2,138,925	+		LRK53_RS09510	0.25	-0.7
2,138,925	+		LRK53_RS09510	0.25	-1.0
2,138,925	+		LRK53_RS09510	0.25	-0.3
2,138,925	+		LRK53_RS09510	0.25	+1.1
2,138,926	-		LRK53_RS09510	0.25	+0.2
2,138,967	+		LRK53_RS09510	0.27	-1.7
2,138,995	-		LRK53_RS09510	0.28	-0.4
2,138,995	-		LRK53_RS09510	0.28	+0.7
2,138,995	-		LRK53_RS09510	0.28	-0.4
2,138,995	-		LRK53_RS09510	0.28	-0.6
2,139,060	+		LRK53_RS09510	0.31	+1.3
2,139,060	+		LRK53_RS09510	0.31	+0.7
2,139,061	-		LRK53_RS09510	0.31	-0.2
2,139,061	-		LRK53_RS09510	0.31	+1.3
2,139,061	-		LRK53_RS09510	0.31	-0.7
2,139,111	+		LRK53_RS09510	0.34	+1.6
2,139,111	+		LRK53_RS09510	0.34	+1.1
2,139,111	+		LRK53_RS09510	0.34	-0.5
2,139,112	-		LRK53_RS09510	0.34	-1.0
2,139,112	-		LRK53_RS09510	0.34	-0.8
2,139,165	+		LRK53_RS09510	0.36	-0.7
2,139,165	+		LRK53_RS09510	0.36	+2.3
2,139,165	+		LRK53_RS09510	0.36	-0.7
2,139,165	+		LRK53_RS09510	0.36	-0.5
2,139,165	+		LRK53_RS09510	0.36	-0.3
2,139,165	+		LRK53_RS09510	0.36	-1.5
2,139,165	+		LRK53_RS09510	0.36	-2.0
2,139,165	+		LRK53_RS09510	0.36	-0.3
2,139,166	-		LRK53_RS09510	0.36	+1.1
2,139,166	-		LRK53_RS09510	0.36	-1.7
2,139,198	+		LRK53_RS09510	0.38	-0.1
2,139,199	-		LRK53_RS09510	0.38	-0.6
2,139,199	-		LRK53_RS09510	0.38	+0.1
2,139,199	-		LRK53_RS09510	0.38	+1.3