Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09375

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,097,127	+		LRK53_RS09370	0.68	+0.1
2,097,127	+		LRK53_RS09370	0.68	+0.6
2,097,127	+		LRK53_RS09370	0.68	-0.0
2,097,127	+		LRK53_RS09370	0.68	-0.9
2,097,127	+		LRK53_RS09370	0.68	-0.5
2,097,127	+		LRK53_RS09370	0.68	+0.2
2,097,127	+		LRK53_RS09370	0.68	-2.6
2,097,128	-		LRK53_RS09370	0.68	+0.2
2,097,128	-		LRK53_RS09370	0.68	-1.5
2,097,128	-		LRK53_RS09370	0.68	-1.5
2,097,128	-		LRK53_RS09370	0.68	-0.0
2,097,128	-		LRK53_RS09370	0.68	+0.5
2,097,128	-		LRK53_RS09370	0.68	+0.7
2,097,128	-		LRK53_RS09370	0.68	+1.7
2,097,226	+		LRK53_RS09370	0.72	-2.0
2,097,226	+		LRK53_RS09370	0.72	-0.5
2,097,226	+		LRK53_RS09370	0.72	+1.3
2,097,226	+		LRK53_RS09370	0.72	+1.7
2,097,226	+		LRK53_RS09370	0.72	-0.7
2,097,283	+		LRK53_RS09370	0.74	-0.7
2,097,283	+		LRK53_RS09370	0.74	+1.3
2,097,284	-		LRK53_RS09370	0.75	+0.4
2,097,284	-		LRK53_RS09370	0.75	-1.5
2,097,284	-		LRK53_RS09370	0.75	+0.1
2,097,289	+		LRK53_RS09370	0.75	-0.9
2,097,290	-		LRK53_RS09370	0.75	-0.0
2,097,290	-		LRK53_RS09370	0.75	-0.2
2,097,290	-		LRK53_RS09370	0.75	+0.3
2,097,298	+		LRK53_RS09370	0.75	+0.7
2,097,298	+		LRK53_RS09370	0.75	+0.6
2,097,306	+		LRK53_RS09370	0.75	-1.1
2,097,469	+		LRK53_RS09370	0.83	-0.8
2,097,469	+		LRK53_RS09370	0.83	+0.8
2,097,469	+		LRK53_RS09370	0.83	-1.2
2,097,470	-		LRK53_RS09370	0.83	-0.7
2,097,470	-		LRK53_RS09370	0.83	-1.7
2,097,679	+				-0.6
2,097,679	+				+0.2
2,097,679	+				+0.0
2,097,679	+				-0.7
2,097,680	-				+0.8
2,097,680	-				-1.4
2,097,753	+				-1.4
2,097,786	+				-0.0
2,097,786	+				-1.5
2,097,860	-				-0.4
2,097,866	-				-0.5
2,097,886	-				+1.3
2,098,047	+				-0.6
2,098,047	+				-1.8
2,098,047	+				+2.0
2,098,047	+				-1.6
2,098,048	-				+1.3
2,098,125	+				-1.1
2,098,126	-				-0.3
2,098,254	-		LRK53_RS09375	0.11	-1.3
2,098,254	-		LRK53_RS09375	0.11	-0.0
2,098,319	-		LRK53_RS09375	0.16	+0.8
2,098,319	-		LRK53_RS09375	0.16	-0.7
2,098,418	+		LRK53_RS09375	0.24	-1.2
2,098,418	+		LRK53_RS09375	0.24	-1.7
2,098,419	-		LRK53_RS09375	0.24	+0.1
2,098,445	-		LRK53_RS09375	0.26	+0.3
2,098,445	-		LRK53_RS09375	0.26	-0.3
2,098,462	-		LRK53_RS09375	0.27	+0.3
2,098,462	-		LRK53_RS09375	0.27	-0.4
2,098,529	+		LRK53_RS09375	0.33	-0.7
2,098,529	+		LRK53_RS09375	0.33	-2.6
2,098,530	-		LRK53_RS09375	0.33	-1.7
2,098,592	+		LRK53_RS09375	0.38	-0.3
2,098,593	-		LRK53_RS09375	0.38	+0.9
2,098,593	-		LRK53_RS09375	0.38	+1.3
2,098,593	-		LRK53_RS09375	0.38	-1.7
2,098,593	-		LRK53_RS09375	0.38	-0.6
2,098,599	+		LRK53_RS09375	0.38	-0.7
2,098,599	+		LRK53_RS09375	0.38	+0.1
2,098,637	+		LRK53_RS09375	0.41	-2.0
2,098,637	+		LRK53_RS09375	0.41	+0.7
2,098,674	+		LRK53_RS09375	0.44	-0.0
2,098,748	+		LRK53_RS09375	0.50	-0.7
2,098,748	+		LRK53_RS09375	0.50	-0.5
2,098,748	+		LRK53_RS09375	0.50	+2.3
2,098,749	-		LRK53_RS09375	0.50	-0.1
2,098,749	-		LRK53_RS09375	0.50	-0.7
2,098,749	-		LRK53_RS09375	0.50	-0.9
2,098,784	+		LRK53_RS09375	0.53	-1.0
2,098,785	-		LRK53_RS09375	0.53	-1.9
2,098,982	+		LRK53_RS09375	0.68	-1.0
2,099,042	+		LRK53_RS09375	0.73	-0.3
2,099,042	+		LRK53_RS09375	0.73	-1.0
2,099,043	-		LRK53_RS09375	0.73	-1.0
2,099,044	-		LRK53_RS09375	0.73	-0.6
2,099,067	-		LRK53_RS09375	0.75	+0.3
2,099,087	+		LRK53_RS09375	0.76	-1.5
2,099,088	-		LRK53_RS09375	0.76	-0.2
2,099,090	-		LRK53_RS09375	0.77	-1.2
2,099,090	-		LRK53_RS09375	0.77	+0.5
2,099,114	+		LRK53_RS09375	0.79	-0.3
2,099,114	+		LRK53_RS09375	0.79	-1.3
2,099,114	+		LRK53_RS09375	0.79	-0.7
2,099,115	-		LRK53_RS09375	0.79	-1.0
2,099,117	-		LRK53_RS09375	0.79	-1.8
2,099,177	+		LRK53_RS09375	0.83	-0.6
2,099,205	+		LRK53_RS09375	0.86	+0.6
2,099,206	-		LRK53_RS09375	0.86	-0.3
2,099,275	-				+0.1
2,099,275	-				-1.5
2,099,277	+				-0.5
2,099,277	+				+0.3
2,099,277	+				-1.3
2,099,278	-				-1.0
2,099,278	-				-1.7
2,099,282	-				+2.3
2,099,282	-				-0.5
2,099,287	+				-1.0
2,099,430	+				-0.3
2,099,430	+				-0.0
2,099,430	+				-0.0
2,099,430	+				-1.7
2,099,430	+				-0.3
2,099,430	+				-1.5
2,099,430	+				-0.3
2,099,430	+				-0.6
2,099,430	+				-0.6
2,099,430	+				-0.2
2,099,430	+				-0.6
2,099,430	+				+1.9
2,099,430	+				-0.1
2,099,430	+				-1.0
2,099,430	+				+0.0
2,099,431	-				+0.3
2,099,431	-				+0.7
2,099,431	-				-1.8
2,099,431	-				-1.3
2,099,431	-				+0.1
2,099,431	-				-0.1
2,099,431	-				-1.6
2,099,431	-				-1.2
2,099,431	-				+0.3
2,099,438	+				-0.7
2,099,438	+				-0.9
2,099,438	+				-2.3
2,099,438	+				+0.1
2,099,438	+				-1.2
2,099,438	+				-1.3
2,099,438	+				-1.3
2,099,438	+				-1.0
2,099,439	-				+0.3
2,099,439	-				+1.3
2,099,439	-				+0.0
2,099,439	-				-0.8
2,099,439	-				-0.4
2,099,439	-				-0.6
2,099,439	-				-0.7
2,099,439	-				+0.4
2,099,466	+				-0.0
2,099,466	+				-1.0
2,099,466	+				+1.3
2,099,466	+				-1.5
2,099,467	-				+0.7
2,099,467	-				+0.7
2,099,467	-				-0.3
2,099,556	+				-1.4
2,099,557	-				-1.4
2,099,557	-				-0.8
2,099,557	-				-0.3
2,099,903	+		LRK53_RS09380	0.17	-0.3
2,099,903	+		LRK53_RS09380	0.17	-2.6
2,099,903	+		LRK53_RS09380	0.17	+1.3
2,099,903	+		LRK53_RS09380	0.17	-1.0
2,099,903	+		LRK53_RS09380	0.17	-2.8
2,099,903	+		LRK53_RS09380	0.17	-2.0
2,099,903	+		LRK53_RS09380	0.17	-1.7
2,099,904	-		LRK53_RS09380	0.17	-2.0
2,099,904	-		LRK53_RS09380	0.17	+0.6
2,099,904	-		LRK53_RS09380	0.17	-1.0
2,099,904	-		LRK53_RS09380	0.17	-1.5
2,099,904	-		LRK53_RS09380	0.17	-0.5
2,099,904	-		LRK53_RS09380	0.17	-0.3
2,099,904	-		LRK53_RS09380	0.17	-2.2
2,099,904	-		LRK53_RS09380	0.17	-2.3
2,099,918	+		LRK53_RS09380	0.17	-1.2
2,099,918	+		LRK53_RS09380	0.17	-1.7
2,099,919	-		LRK53_RS09380	0.17	+1.0
2,099,919	-		LRK53_RS09380	0.17	+0.6
2,099,919	-		LRK53_RS09380	0.17	-0.4
2,099,921	+		LRK53_RS09380	0.17	+0.4
2,099,921	+		LRK53_RS09380	0.17	-0.7
2,099,921	+		LRK53_RS09380	0.17	+1.6
2,099,921	+		LRK53_RS09380	0.17	-1.9
2,099,922	-		LRK53_RS09380	0.17	+0.1
2,099,922	-		LRK53_RS09380	0.17	+0.9
2,100,002	+		LRK53_RS09380	0.21	-0.5
2,100,003	-		LRK53_RS09380	0.21	+3.3
2,100,003	-		LRK53_RS09380	0.21	+1.3
2,100,003	-		LRK53_RS09380	0.21	-0.3
2,100,003	-		LRK53_RS09380	0.21	-0.3
2,100,003	-		LRK53_RS09380	0.21	+0.3
2,100,119	+		LRK53_RS09380	0.26	-1.4
2,100,119	+		LRK53_RS09380	0.26	+0.3
2,100,119	+		LRK53_RS09380	0.26	+0.1
2,100,119	+		LRK53_RS09380	0.26	-1.3
2,100,119	+		LRK53_RS09380	0.26	-1.8
2,100,120	-		LRK53_RS09380	0.26	+1.3
2,100,188	+		LRK53_RS09380	0.29	-0.1
2,100,188	+		LRK53_RS09380	0.29	-0.7
2,100,189	-		LRK53_RS09380	0.29	-1.9
2,100,218	+		LRK53_RS09380	0.30	-1.7
2,100,218	+		LRK53_RS09380	0.30	-0.9
2,100,218	+		LRK53_RS09380	0.30	-0.5
2,100,218	+		LRK53_RS09380	0.30	-0.4
2,100,219	-		LRK53_RS09380	0.30	+3.2
2,100,219	-		LRK53_RS09380	0.30	+0.3
2,100,219	-		LRK53_RS09380	0.30	-1.0
2,100,219	-		LRK53_RS09380	0.30	-1.9
2,100,219	-		LRK53_RS09380	0.30	-0.3
2,100,302	+		LRK53_RS09380	0.34	-0.1
2,100,302	+		LRK53_RS09380	0.34	+0.3
2,100,303	-		LRK53_RS09380	0.34	+0.7