Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07970

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,788,783	+				-1.5
1,788,817	+				+0.3
1,788,817	+				-1.1
1,788,817	+				+1.3
1,788,934	+		LRK53_RS07965	0.19	-0.3
1,788,934	+		LRK53_RS07965	0.19	-1.3
1,788,934	+		LRK53_RS07965	0.19	-1.1
1,788,934	+		LRK53_RS07965	0.19	-1.1
1,788,934	+		LRK53_RS07965	0.19	-1.2
1,788,934	+		LRK53_RS07965	0.19	+0.1
1,788,934	+		LRK53_RS07965	0.19	-0.2
1,788,935	-		LRK53_RS07965	0.19	+1.0
1,788,935	-		LRK53_RS07965	0.19	+0.7
1,788,935	-		LRK53_RS07965	0.19	-0.3
1,788,935	-		LRK53_RS07965	0.19	-0.7
1,788,935	-		LRK53_RS07965	0.19	-0.1
1,788,935	-		LRK53_RS07965	0.19	+1.3
1,788,935	-		LRK53_RS07965	0.19	+0.8
1,789,129	-		LRK53_RS07965	0.42	+0.3
1,789,129	-		LRK53_RS07965	0.42	-0.7
1,789,276	+		LRK53_RS07965	0.59	+0.8
1,789,276	+		LRK53_RS07965	0.59	-1.7
1,789,276	+		LRK53_RS07965	0.59	-0.7
1,789,276	+		LRK53_RS07965	0.59	+0.3
1,789,277	-		LRK53_RS07965	0.59	-0.2
1,789,357	+		LRK53_RS07965	0.69	+0.3
1,789,357	+		LRK53_RS07965	0.69	+1.7
1,789,357	+		LRK53_RS07965	0.69	-0.2
1,789,357	+		LRK53_RS07965	0.69	+0.2
1,789,357	+		LRK53_RS07965	0.69	+0.4
1,789,357	+		LRK53_RS07965	0.69	+1.3
1,789,357	+		LRK53_RS07965	0.69	-0.0
1,789,357	+		LRK53_RS07965	0.69	+1.3
1,789,358	-		LRK53_RS07965	0.69	-0.5
1,789,358	-		LRK53_RS07965	0.69	+0.1
1,789,358	-		LRK53_RS07965	0.69	+0.3
1,789,358	-		LRK53_RS07965	0.69	+0.3
1,789,358	-		LRK53_RS07965	0.69	-2.1
1,789,358	-		LRK53_RS07965	0.69	+1.8
1,789,358	-		LRK53_RS07965	0.69	+0.4
1,789,358	-		LRK53_RS07965	0.69	-0.4
1,789,358	-		LRK53_RS07965	0.69	-0.8
1,789,358	-		LRK53_RS07965	0.69	+0.3
1,789,358	-		LRK53_RS07965	0.69	+1.3
1,789,358	-		LRK53_RS07965	0.69	-0.3
1,789,358	-		LRK53_RS07965	0.69	-0.3
1,789,375	+		LRK53_RS07965	0.71	-2.4
1,789,375	+		LRK53_RS07965	0.71	-1.1
1,789,375	+		LRK53_RS07965	0.71	-1.0
1,789,375	+		LRK53_RS07965	0.71	-0.6
1,789,375	+		LRK53_RS07965	0.71	-0.3
1,789,375	+		LRK53_RS07965	0.71	-2.3
1,789,375	+		LRK53_RS07965	0.71	+1.3
1,789,375	+		LRK53_RS07965	0.71	-0.6
1,789,375	+		LRK53_RS07965	0.71	-0.4
1,789,375	+		LRK53_RS07965	0.71	+0.9
1,789,375	+		LRK53_RS07965	0.71	+0.1
1,789,376	-		LRK53_RS07965	0.71	-0.7
1,789,376	-		LRK53_RS07965	0.71	-1.4
1,789,376	-		LRK53_RS07965	0.71	-0.3
1,789,376	-		LRK53_RS07965	0.71	+0.1
1,789,376	-		LRK53_RS07965	0.71	+0.3
1,789,376	-		LRK53_RS07965	0.71	+1.3
1,789,510	+		LRK53_RS07965	0.87	-1.9
1,789,510	+		LRK53_RS07965	0.87	-0.7
1,789,510	+		LRK53_RS07965	0.87	-0.6
1,789,510	+		LRK53_RS07965	0.87	+0.4
1,789,510	+		LRK53_RS07965	0.87	-1.7
1,789,510	+		LRK53_RS07965	0.87	-0.2
1,789,510	+		LRK53_RS07965	0.87	+0.3
1,789,510	+		LRK53_RS07965	0.87	+1.1
1,789,510	+		LRK53_RS07965	0.87	+1.3
1,789,511	-		LRK53_RS07965	0.87	-0.3
1,789,511	-		LRK53_RS07965	0.87	+0.2
1,789,511	-		LRK53_RS07965	0.87	-0.1
1,789,511	-		LRK53_RS07965	0.87	-1.1
1,789,511	-		LRK53_RS07965	0.87	+0.7
1,789,511	-		LRK53_RS07965	0.87	+0.1
1,789,511	-		LRK53_RS07965	0.87	-2.6
1,789,511	-		LRK53_RS07965	0.87	-0.6
1,789,773	+				-1.1
1,789,774	-				-2.1
1,789,774	-				+0.1
1,789,902	+		LRK53_RS07970	0.15	-0.8
1,789,902	+		LRK53_RS07970	0.15	+0.4
1,789,902	+		LRK53_RS07970	0.15	-0.1
1,789,902	+		LRK53_RS07970	0.15	-0.7
1,789,902	+		LRK53_RS07970	0.15	-1.7
1,789,902	+		LRK53_RS07970	0.15	-0.1
1,789,902	+		LRK53_RS07970	0.15	-0.1
1,789,902	+		LRK53_RS07970	0.15	-0.7
1,789,902	+		LRK53_RS07970	0.15	-0.8
1,789,903	-		LRK53_RS07970	0.15	-0.7
1,789,903	-		LRK53_RS07970	0.15	-0.4
1,789,903	-		LRK53_RS07970	0.15	-0.7
1,789,903	-		LRK53_RS07970	0.15	+0.3
1,789,935	+		LRK53_RS07970	0.19	-0.7
1,789,935	+		LRK53_RS07970	0.19	-1.1
1,789,935	+		LRK53_RS07970	0.19	-1.7
1,789,935	+		LRK53_RS07970	0.19	-1.9
1,789,936	-		LRK53_RS07970	0.19	-1.4
1,789,936	-		LRK53_RS07970	0.19	-0.8
1,789,936	-		LRK53_RS07970	0.19	+0.3
1,790,119	-		LRK53_RS07970	0.40	-0.8
1,790,553	+		LRK53_RS07970	0.89	-1.8
1,790,553	+		LRK53_RS07970	0.89	+0.6
1,790,554	-		LRK53_RS07970	0.89	-2.1
1,790,554	-		LRK53_RS07970	0.89	+0.3
1,790,728	-				-0.3
1,790,776	+				+1.8
1,790,791	+				-1.9
1,790,791	+				+0.7
1,790,791	+				-0.6
1,790,844	+				-0.7
1,790,844	+				+0.2
1,790,844	+				-0.9
1,790,844	+				-1.2
1,790,844	+				-1.3
1,790,844	+				-2.7
1,790,844	+				-0.2
1,790,844	+				+0.3
1,790,845	-				-0.6
1,790,845	-				-1.6
1,790,845	-				-2.2
1,790,920	+				-0.6
1,790,920	+				+0.0
1,790,921	-				-1.6
1,790,921	-				-1.0
1,790,921	-				-1.4
1,790,921	-				-0.1
1,790,927	+				+1.3
1,790,927	+				+1.3
1,790,927	+				-1.3
1,790,927	+				+0.3
1,790,927	+				-0.2
1,790,927	+				-0.7
1,790,927	+				-1.1
1,790,927	+				-0.2
1,790,927	+				-0.1
1,790,928	-				-0.3
1,790,928	-				-0.7
1,790,928	-				-0.2
1,790,928	-				-0.6
1,790,928	-				-2.4
1,790,928	-				+1.3
1,790,928	-				-1.6
1,791,024	+		LRK53_RS07975	0.18	-2.6
1,791,024	+		LRK53_RS07975	0.18	+1.3
1,791,024	+		LRK53_RS07975	0.18	-2.1
1,791,024	+		LRK53_RS07975	0.18	+0.3
1,791,024	+		LRK53_RS07975	0.18	-0.3
1,791,024	+		LRK53_RS07975	0.18	+0.7
1,791,024	+		LRK53_RS07975	0.18	-2.2
1,791,024	+		LRK53_RS07975	0.18	-2.1
1,791,024	+		LRK53_RS07975	0.18	-0.6
1,791,024	+		LRK53_RS07975	0.18	-0.9
1,791,024	+		LRK53_RS07975	0.18	+0.1
1,791,024	+		LRK53_RS07975	0.18	+1.5
1,791,024	+		LRK53_RS07975	0.18	-1.1
1,791,025	-		LRK53_RS07975	0.18	-0.3
1,791,025	-		LRK53_RS07975	0.18	-1.3
1,791,025	-		LRK53_RS07975	0.18	-1.3
1,791,025	-		LRK53_RS07975	0.18	+0.6
1,791,025	-		LRK53_RS07975	0.18	-0.6
1,791,025	-		LRK53_RS07975	0.18	-0.8
1,791,025	-		LRK53_RS07975	0.18	-0.8
1,791,025	-		LRK53_RS07975	0.18	+0.0
1,791,025	-		LRK53_RS07975	0.18	+0.7
1,791,025	-		LRK53_RS07975	0.18	-0.2
1,791,054	+		LRK53_RS07975	0.21	-1.1
1,791,054	+		LRK53_RS07975	0.21	-0.3
1,791,054	+		LRK53_RS07975	0.21	+0.3
1,791,054	+		LRK53_RS07975	0.21	+0.7
1,791,054	+		LRK53_RS07975	0.21	-0.2
1,791,054	+		LRK53_RS07975	0.21	+0.5
1,791,054	+		LRK53_RS07975	0.21	-0.4
1,791,054	+		LRK53_RS07975	0.21	-0.1
1,791,054	+		LRK53_RS07975	0.21	-0.3
1,791,054	+		LRK53_RS07975	0.21	+0.3
1,791,054	+		LRK53_RS07975	0.21	-1.6
1,791,054	+		LRK53_RS07975	0.21	+0.1
1,791,054	+		LRK53_RS07975	0.21	-0.3
1,791,054	+		LRK53_RS07975	0.21	-2.7
1,791,054	+		LRK53_RS07975	0.21	-0.1
1,791,055	-		LRK53_RS07975	0.21	+1.3
1,791,055	-		LRK53_RS07975	0.21	-1.2
1,791,055	-		LRK53_RS07975	0.21	-0.3
1,791,055	-		LRK53_RS07975	0.21	-0.4
1,791,055	-		LRK53_RS07975	0.21	+0.3
1,791,055	-		LRK53_RS07975	0.21	-0.6
1,791,055	-		LRK53_RS07975	0.21	+0.4
1,791,055	-		LRK53_RS07975	0.21	-1.1
1,791,055	-		LRK53_RS07975	0.21	-2.4
1,791,055	-		LRK53_RS07975	0.21	+1.3
1,791,055	-		LRK53_RS07975	0.21	-0.9
1,791,055	-		LRK53_RS07975	0.21	-0.3
1,791,055	-		LRK53_RS07975	0.21	-0.9
1,791,135	+		LRK53_RS07975	0.27	-0.2
1,791,135	+		LRK53_RS07975	0.27	-0.9
1,791,135	+		LRK53_RS07975	0.27	-1.9
1,791,135	+		LRK53_RS07975	0.27	-0.1
1,791,135	+		LRK53_RS07975	0.27	-2.4
1,791,135	+		LRK53_RS07975	0.27	-1.3
1,791,136	-		LRK53_RS07975	0.28	-0.9
1,791,136	-		LRK53_RS07975	0.28	-0.2
1,791,136	-		LRK53_RS07975	0.28	-0.9
1,791,136	-		LRK53_RS07975	0.28	-0.0
1,791,136	-		LRK53_RS07975	0.28	-1.0
1,791,136	-		LRK53_RS07975	0.28	-0.4
1,791,144	+		LRK53_RS07975	0.28	-1.2
1,791,144	+		LRK53_RS07975	0.28	+0.2
1,791,144	+		LRK53_RS07975	0.28	-2.1
1,791,144	+		LRK53_RS07975	0.28	-1.1
1,791,144	+		LRK53_RS07975	0.28	-2.4
1,791,144	+		LRK53_RS07975	0.28	-0.3
1,791,144	+		LRK53_RS07975	0.28	-0.6
1,791,144	+		LRK53_RS07975	0.28	-0.9
1,791,144	+		LRK53_RS07975	0.28	-1.3
1,791,144	+		LRK53_RS07975	0.28	-1.7
1,791,144	+		LRK53_RS07975	0.28	-1.0
1,791,144	+		LRK53_RS07975	0.28	-0.2
1,791,144	+		LRK53_RS07975	0.28	-1.1
1,791,144	+		LRK53_RS07975	0.28	+1.3
1,791,144	+		LRK53_RS07975	0.28	+1.3
1,791,144	+		LRK53_RS07975	0.28	+0.5
1,791,144	+		LRK53_RS07975	0.28	+0.7
1,791,144	+		LRK53_RS07975	0.28	-1.2
1,791,144	+		LRK53_RS07975	0.28	+0.5
1,791,144	+		LRK53_RS07975	0.28	-1.1
1,791,144	+		LRK53_RS07975	0.28	-0.6
1,791,144	+		LRK53_RS07975	0.28	+0.4
1,791,144	+		LRK53_RS07975	0.28	+0.4
1,791,144	+		LRK53_RS07975	0.28	-0.9
1,791,144	+		LRK53_RS07975	0.28	-1.1
1,791,145	-		LRK53_RS07975	0.28	-1.4
1,791,145	-		LRK53_RS07975	0.28	+0.5
1,791,145	-		LRK53_RS07975	0.28	+1.3
1,791,145	-		LRK53_RS07975	0.28	-2.3
1,791,145	-		LRK53_RS07975	0.28	-0.7
1,791,145	-		LRK53_RS07975	0.28	-1.6
1,791,145	-		LRK53_RS07975	0.28	-0.5
1,791,145	-		LRK53_RS07975	0.28	-1.3
1,791,145	-		LRK53_RS07975	0.28	-0.4
1,791,145	-		LRK53_RS07975	0.28	-1.1
1,791,145	-		LRK53_RS07975	0.28	-1.1
1,791,145	-		LRK53_RS07975	0.28	+1.3
1,791,145	-		LRK53_RS07975	0.28	-0.3
1,791,145	-		LRK53_RS07975	0.28	+1.3
1,791,150	+		LRK53_RS07975	0.29	-0.7
1,791,150	+		LRK53_RS07975	0.29	+0.7
1,791,177	+		LRK53_RS07975	0.31	-0.3
1,791,177	+		LRK53_RS07975	0.31	-1.9
1,791,177	+		LRK53_RS07975	0.31	-2.1
1,791,177	+		LRK53_RS07975	0.31	-1.3
1,791,177	+		LRK53_RS07975	0.31	+0.3
1,791,177	+		LRK53_RS07975	0.31	-0.1
1,791,177	+		LRK53_RS07975	0.31	-1.3
1,791,177	+		LRK53_RS07975	0.31	-0.1
1,791,177	+		LRK53_RS07975	0.31	-1.3
1,791,177	+		LRK53_RS07975	0.31	+1.3
1,791,177	+		LRK53_RS07975	0.31	-1.7
1,791,178	-		LRK53_RS07975	0.31	-1.7
1,791,178	-		LRK53_RS07975	0.31	-0.3
1,791,178	-		LRK53_RS07975	0.31	+0.0
1,791,178	-		LRK53_RS07975	0.31	-0.8
1,791,178	-		LRK53_RS07975	0.31	-0.6
1,791,561	+		LRK53_RS07975	0.64	-1.2
1,791,562	-		LRK53_RS07975	0.64	-2.0
1,791,621	+		LRK53_RS07975	0.69	-0.8
1,791,622	-		LRK53_RS07975	0.69	+1.3