Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07120

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,603,347	+		LRK53_RS07110	0.72	-0.1
1,603,348	-		LRK53_RS07110	0.72	+0.1
1,603,422	+		LRK53_RS07110	0.75	-1.1
1,603,422	+		LRK53_RS07110	0.75	-0.0
1,603,422	+		LRK53_RS07110	0.75	-0.9
1,603,422	+		LRK53_RS07110	0.75	-1.3
1,603,422	+		LRK53_RS07110	0.75	+0.0
1,603,422	+		LRK53_RS07110	0.75	+1.3
1,603,422	+		LRK53_RS07110	0.75	-0.2
1,603,422	+		LRK53_RS07110	0.75	-0.7
1,603,422	+		LRK53_RS07110	0.75	-1.5
1,603,423	-		LRK53_RS07110	0.75	-1.1
1,603,423	-		LRK53_RS07110	0.75	-1.1
1,603,423	-		LRK53_RS07110	0.75	-1.9
1,603,423	-		LRK53_RS07110	0.75	-0.6
1,603,423	-		LRK53_RS07110	0.75	-1.3
1,603,423	-		LRK53_RS07110	0.75	-0.7
1,603,423	-		LRK53_RS07110	0.75	-1.1
1,603,437	+		LRK53_RS07110	0.76	-0.1
1,603,437	+		LRK53_RS07110	0.76	+0.8
1,603,437	+		LRK53_RS07110	0.76	-0.3
1,603,437	+		LRK53_RS07110	0.76	-0.1
1,603,437	+		LRK53_RS07110	0.76	-0.3
1,603,437	+		LRK53_RS07110	0.76	+0.3
1,603,437	+		LRK53_RS07110	0.76	-0.7
1,603,437	+		LRK53_RS07110	0.76	+0.3
1,603,437	+		LRK53_RS07110	0.76	+1.3
1,603,437	+		LRK53_RS07110	0.76	+1.3
1,603,437	+		LRK53_RS07110	0.76	-1.5
1,603,437	+		LRK53_RS07110	0.76	-0.3
1,603,437	+		LRK53_RS07110	0.76	+1.3
1,603,437	+		LRK53_RS07110	0.76	-0.2
1,603,437	+		LRK53_RS07110	0.76	-1.3
1,603,437	+		LRK53_RS07110	0.76	+0.0
1,603,437	+		LRK53_RS07110	0.76	-1.1
1,603,438	-		LRK53_RS07110	0.76	-0.3
1,603,438	-		LRK53_RS07110	0.76	+0.0
1,603,438	-		LRK53_RS07110	0.76	+0.7
1,603,438	-		LRK53_RS07110	0.76	+0.2
1,603,438	-		LRK53_RS07110	0.76	+1.3
1,603,438	-		LRK53_RS07110	0.76	+0.5
1,603,438	-		LRK53_RS07110	0.76	-2.1
1,603,438	-		LRK53_RS07110	0.76	+0.3
1,603,438	-		LRK53_RS07110	0.76	-0.3
1,603,438	-		LRK53_RS07110	0.76	-1.0
1,603,438	-		LRK53_RS07110	0.76	+3.1
1,603,438	-		LRK53_RS07110	0.76	-1.3
1,603,438	-		LRK53_RS07110	0.76	+1.3
1,603,438	-		LRK53_RS07110	0.76	-1.3
1,603,551	+		LRK53_RS07110	0.81	+2.9
1,603,551	+		LRK53_RS07110	0.81	-1.1
1,603,552	-		LRK53_RS07110	0.82	-0.1
1,603,552	-		LRK53_RS07110	0.82	-0.7
1,603,932	+				+1.3
1,603,932	+				+1.3
1,603,932	+				+0.5
1,603,932	+				-0.6
1,603,932	+				-0.5
1,603,932	+				+0.2
1,603,932	+				+0.3
1,603,932	+				+0.6
1,603,932	+				-0.7
1,603,932	+				+0.6
1,603,932	+				-0.1
1,603,933	-				-0.1
1,603,933	-				-0.1
1,603,933	-				-0.7
1,603,933	-				-1.3
1,603,933	-				+0.1
1,603,949	+				-0.7
1,603,950	-				-0.3
1,604,031	+				-1.3
1,604,031	+				+0.9
1,604,031	+				+0.1
1,604,031	+				+0.8
1,604,031	+				+0.7
1,604,032	-				+0.3
1,604,172	+		LRK53_RS07115	0.58	+0.6
1,604,173	-		LRK53_RS07115	0.58	+0.2
1,604,173	-		LRK53_RS07115	0.58	-1.3
1,604,173	-		LRK53_RS07115	0.58	-2.0
1,604,196	+		LRK53_RS07115	0.71	-0.3
1,604,196	+		LRK53_RS07115	0.71	-1.0
1,604,196	+		LRK53_RS07115	0.71	-2.7
1,604,196	+		LRK53_RS07115	0.71	-0.7
1,604,196	+		LRK53_RS07115	0.71	-0.3
1,604,196	+		LRK53_RS07115	0.71	-0.3
1,604,196	+		LRK53_RS07115	0.71	-0.6
1,604,196	+		LRK53_RS07115	0.71	-0.7
1,604,196	+		LRK53_RS07115	0.71	+1.3
1,604,196	+		LRK53_RS07115	0.71	+0.7
1,604,196	+		LRK53_RS07115	0.71	+1.3
1,604,196	+		LRK53_RS07115	0.71	+0.4
1,604,197	-		LRK53_RS07115	0.72	-0.3
1,604,197	-		LRK53_RS07115	0.72	-1.1
1,604,197	-		LRK53_RS07115	0.72	-1.5
1,604,197	-		LRK53_RS07115	0.72	-0.7
1,604,197	-		LRK53_RS07115	0.72	-0.1
1,604,197	-		LRK53_RS07115	0.72	-0.7
1,604,197	-		LRK53_RS07115	0.72	-0.3
1,604,197	-		LRK53_RS07115	0.72	-1.9
1,604,197	-		LRK53_RS07115	0.72	-0.1
1,604,197	-		LRK53_RS07115	0.72	-0.3
1,604,197	-		LRK53_RS07115	0.72	-0.7
1,604,197	-		LRK53_RS07115	0.72	+1.3
1,604,197	-		LRK53_RS07115	0.72	-2.4
1,604,249	+				-1.2
1,604,249	+				-0.1
1,604,249	+				-1.3
1,604,249	+				+0.7
1,604,249	+				-0.5
1,604,249	+				+0.3
1,604,249	+				+0.8
1,604,249	+				-1.5
1,604,250	-				-1.1
1,604,250	-				-2.2
1,604,318	+				-0.1
1,604,318	+				-1.9
1,604,319	-				-0.3
1,604,319	-				+1.3
1,604,325	+				+0.7
1,604,359	+				+0.9
1,604,359	+				-2.9
1,604,360	-				+0.1
1,604,490	+		LRK53_RS07120	0.25	+1.4
1,604,490	+		LRK53_RS07120	0.25	-0.5
1,604,490	+		LRK53_RS07120	0.25	-0.8
1,604,490	+		LRK53_RS07120	0.25	-2.4
1,604,490	+		LRK53_RS07120	0.25	-0.3
1,604,490	+		LRK53_RS07120	0.25	-0.7
1,604,490	+		LRK53_RS07120	0.25	-3.0
1,604,490	+		LRK53_RS07120	0.25	-1.3
1,604,490	+		LRK53_RS07120	0.25	-1.7
1,604,490	+		LRK53_RS07120	0.25	-0.4
1,604,490	+		LRK53_RS07120	0.25	-2.1
1,604,490	+		LRK53_RS07120	0.25	+0.5
1,604,490	+		LRK53_RS07120	0.25	+0.0
1,604,491	-		LRK53_RS07120	0.25	-1.5
1,604,491	-		LRK53_RS07120	0.25	+1.3
1,604,491	-		LRK53_RS07120	0.25	+0.0
1,604,491	-		LRK53_RS07120	0.25	+0.3
1,604,491	-		LRK53_RS07120	0.25	-0.7
1,604,491	-		LRK53_RS07120	0.25	-0.5
1,604,491	-		LRK53_RS07120	0.25	+2.9
1,604,491	-		LRK53_RS07120	0.25	-2.4
1,604,491	-		LRK53_RS07120	0.25	+1.1
1,604,491	-		LRK53_RS07120	0.25	-0.7
1,604,491	-		LRK53_RS07120	0.25	-1.8
1,604,491	-		LRK53_RS07120	0.25	+0.5
1,604,491	-		LRK53_RS07120	0.25	-2.3
1,604,491	-		LRK53_RS07120	0.25	-0.3
1,604,491	-		LRK53_RS07120	0.25	-0.9
1,604,491	-		LRK53_RS07120	0.25	+1.3
1,604,650	-		LRK53_RS07120	0.50	+0.3
1,604,745	+		LRK53_RS07120	0.64	-2.1
1,604,745	+		LRK53_RS07120	0.64	-1.1
1,604,746	-		LRK53_RS07120	0.64	-1.7
1,604,746	-		LRK53_RS07120	0.64	-1.1
1,604,746	-		LRK53_RS07120	0.64	-1.1
1,604,746	-		LRK53_RS07120	0.64	+0.5
1,604,746	-		LRK53_RS07120	0.64	-0.1
1,604,746	-		LRK53_RS07120	0.64	+0.9
1,604,746	-		LRK53_RS07120	0.64	-0.1
1,604,955	+				-1.4
1,604,955	+				+1.9
1,605,014	+				-0.7
1,605,014	+				-1.9
1,605,014	+				-0.1
1,605,015	-				+1.0
1,605,015	-				-0.3
1,605,015	-				-0.1
1,605,015	-				+0.8
1,605,015	-				-1.1
1,605,015	-				-0.3
1,605,015	-				-0.2
1,605,113	+				-0.7
1,605,113	+				-0.7
1,605,114	-				-0.2
1,605,114	-				+1.4
1,605,114	-				-0.7
1,605,164	-				-1.5
1,605,164	-				-0.8
1,605,202	+				-0.7
1,605,202	+				-0.1
1,605,202	+				-0.2
1,605,202	+				-1.2
1,605,202	+				-0.7
1,605,202	+				-1.9
1,605,203	-				+1.0
1,605,313	+				+0.1
1,605,313	+				+0.3
1,605,313	+				-0.7
1,605,323	+				-0.3
1,605,323	+				-0.4
1,605,323	+				-1.5
1,605,323	+				+1.9
1,605,324	-				+0.0
1,605,324	-				-0.1
1,605,324	-				-0.3
1,605,324	-				-0.3
1,605,324	-				-0.1
1,605,324	-				-0.8
1,605,324	-				+0.3
1,605,324	-				+0.9
1,605,324	-				-0.7
1,605,383	+		LRK53_RS07125	0.15	-1.6
1,605,383	+		LRK53_RS07125	0.15	-0.3
1,605,384	-		LRK53_RS07125	0.15	+1.8
1,605,384	-		LRK53_RS07125	0.15	-0.5
1,605,384	-		LRK53_RS07125	0.15	+0.3
1,605,384	-		LRK53_RS07125	0.15	+0.7
1,605,384	-		LRK53_RS07125	0.15	-1.3
1,605,384	-		LRK53_RS07125	0.15	-0.3
1,605,384	-		LRK53_RS07125	0.15	-0.1
1,605,384	-		LRK53_RS07125	0.15	-1.3
1,605,384	-		LRK53_RS07125	0.15	+3.0
1,605,384	-		LRK53_RS07125	0.15	+1.0
1,605,384	-		LRK53_RS07125	0.15	+2.3
1,605,384	-		LRK53_RS07125	0.15	-2.2
1,605,384	-		LRK53_RS07125	0.15	+2.5
1,605,384	-		LRK53_RS07125	0.15	+1.6
1,605,384	-		LRK53_RS07125	0.15	+1.3
1,605,384	-		LRK53_RS07125	0.15	-1.3
1,605,384	-		LRK53_RS07125	0.15	+0.3
1,605,384	-		LRK53_RS07125	0.15	+0.9
1,605,398	+		LRK53_RS07125	0.16	+0.4
1,605,398	+		LRK53_RS07125	0.16	+0.0
1,605,398	+		LRK53_RS07125	0.16	+2.3
1,605,398	+		LRK53_RS07125	0.16	+0.3
1,605,398	+		LRK53_RS07125	0.16	-1.1
1,605,398	+		LRK53_RS07125	0.16	-0.7
1,605,398	+		LRK53_RS07125	0.16	+0.7
1,605,398	+		LRK53_RS07125	0.16	+1.3
1,605,398	+		LRK53_RS07125	0.16	-1.7
1,605,398	+		LRK53_RS07125	0.16	-1.9
1,605,398	+		LRK53_RS07125	0.16	+0.3
1,605,398	+		LRK53_RS07125	0.16	-0.3
1,605,398	+		LRK53_RS07125	0.16	+0.2
1,605,398	+		LRK53_RS07125	0.16	-0.5
1,605,398	+		LRK53_RS07125	0.16	-1.9
1,605,398	+		LRK53_RS07125	0.16	-0.1
1,605,398	+		LRK53_RS07125	0.16	+0.3
1,605,399	-		LRK53_RS07125	0.16	+1.5
1,605,399	-		LRK53_RS07125	0.16	-1.8
1,605,399	-		LRK53_RS07125	0.16	-1.2
1,605,399	-		LRK53_RS07125	0.16	-0.1
1,605,399	-		LRK53_RS07125	0.16	-0.5
1,605,399	-		LRK53_RS07125	0.16	+2.6
1,605,399	-		LRK53_RS07125	0.16	-0.3
1,605,399	-		LRK53_RS07125	0.16	+0.7
1,605,399	-		LRK53_RS07125	0.16	+1.0
1,605,399	-		LRK53_RS07125	0.16	-2.7
1,605,399	-		LRK53_RS07125	0.16	-0.3
1,605,399	-		LRK53_RS07125	0.16	-1.9
1,605,399	-		LRK53_RS07125	0.16	-1.3
1,605,399	-		LRK53_RS07125	0.16	-0.2
1,605,399	-		LRK53_RS07125	0.16	-2.8
1,605,399	-		LRK53_RS07125	0.16	-0.1
1,605,399	-		LRK53_RS07125	0.16	+1.3
1,605,399	-		LRK53_RS07125	0.16	-0.5
1,605,399	-		LRK53_RS07125	0.16	-0.9
1,605,399	-		LRK53_RS07125	0.16	-0.1
1,605,399	-		LRK53_RS07125	0.16	-0.5
1,605,647	+		LRK53_RS07125	0.40	-2.2
1,605,648	-		LRK53_RS07125	0.40	+1.3
1,605,695	+		LRK53_RS07125	0.44	-0.7
1,605,695	+		LRK53_RS07125	0.44	-0.3
1,605,695	+		LRK53_RS07125	0.44	+0.6
1,605,695	+		LRK53_RS07125	0.44	-1.3
1,605,696	-		LRK53_RS07125	0.44	-0.6
1,605,696	-		LRK53_RS07125	0.44	+0.1
1,605,696	-		LRK53_RS07125	0.44	-1.0
1,605,696	-		LRK53_RS07125	0.44	-0.3
1,605,722	+		LRK53_RS07125	0.47	+1.8
1,605,722	+		LRK53_RS07125	0.47	-0.4
1,605,722	+		LRK53_RS07125	0.47	-1.2
1,605,722	+		LRK53_RS07125	0.47	+0.3
1,605,722	+		LRK53_RS07125	0.47	+0.5
1,605,723	-		LRK53_RS07125	0.47	+1.0
1,605,743	+		LRK53_RS07125	0.49	-1.9
1,605,743	+		LRK53_RS07125	0.49	-0.1
1,605,743	+		LRK53_RS07125	0.49	-0.1
1,605,744	-		LRK53_RS07125	0.49	-1.4
1,605,744	-		LRK53_RS07125	0.49	-0.7
1,605,744	-		LRK53_RS07125	0.49	+0.1
1,605,744	-		LRK53_RS07125	0.49	-0.8
1,605,920	+		LRK53_RS07125	0.65	+2.1
1,605,920	+		LRK53_RS07125	0.65	+0.9
1,605,920	+		LRK53_RS07125	0.65	+1.3
1,605,920	+		LRK53_RS07125	0.65	-0.8
1,605,920	+		LRK53_RS07125	0.65	+0.3
1,605,920	+		LRK53_RS07125	0.65	-0.7
1,605,921	-		LRK53_RS07125	0.65	-0.1
1,605,921	-		LRK53_RS07125	0.65	-0.7
1,605,921	-		LRK53_RS07125	0.65	+0.4
1,605,921	-		LRK53_RS07125	0.65	-1.7
1,605,921	-		LRK53_RS07125	0.65	-0.9
1,605,921	-		LRK53_RS07125	0.65	-0.7
1,605,921	-		LRK53_RS07125	0.65	-0.5
1,605,921	-		LRK53_RS07125	0.65	-1.3
1,605,921	-		LRK53_RS07125	0.65	+0.0