Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06195

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,417,982	+		LRK53_RS06185	0.51	+1.3
1,417,982	+		LRK53_RS06185	0.51	+0.9
1,417,982	+		LRK53_RS06185	0.51	-0.3
1,417,982	+		LRK53_RS06185	0.51	+0.3
1,417,983	-		LRK53_RS06185	0.52	-0.7
1,417,983	-		LRK53_RS06185	0.52	-2.3
1,417,983	-		LRK53_RS06185	0.52	+0.1
1,417,983	-		LRK53_RS06185	0.52	-0.8
1,417,983	-		LRK53_RS06185	0.52	+0.3
1,417,983	-		LRK53_RS06185	0.52	+1.3
1,418,009	+		LRK53_RS06185	0.53	-2.2
1,418,010	-		LRK53_RS06185	0.53	+1.9
1,418,010	-		LRK53_RS06185	0.53	-0.9
1,418,018	+		LRK53_RS06185	0.54	-0.3
1,418,018	+		LRK53_RS06185	0.54	+0.7
1,418,056	+		LRK53_RS06185	0.57	-2.3
1,418,056	+		LRK53_RS06185	0.57	+1.2
1,418,056	+		LRK53_RS06185	0.57	+0.3
1,418,057	-		LRK53_RS06185	0.57	-1.3
1,418,057	-		LRK53_RS06185	0.57	-0.6
1,418,078	+		LRK53_RS06185	0.58	-0.6
1,418,078	+		LRK53_RS06185	0.58	+0.3
1,418,078	+		LRK53_RS06185	0.58	-1.2
1,418,078	+		LRK53_RS06185	0.58	-0.7
1,418,078	+		LRK53_RS06185	0.58	-0.2
1,418,078	+		LRK53_RS06185	0.58	+0.1
1,418,078	+		LRK53_RS06185	0.58	-2.3
1,418,079	-		LRK53_RS06185	0.58	-0.0
1,418,079	-		LRK53_RS06185	0.58	+0.3
1,418,079	-		LRK53_RS06185	0.58	-1.9
1,418,079	-		LRK53_RS06185	0.58	-0.9
1,418,120	+		LRK53_RS06185	0.61	-1.5
1,418,120	+		LRK53_RS06185	0.61	+0.3
1,418,120	+		LRK53_RS06185	0.61	+0.3
1,418,121	-		LRK53_RS06185	0.61	-1.2
1,418,192	+		LRK53_RS06185	0.66	+1.3
1,418,192	+		LRK53_RS06185	0.66	-1.0
1,418,192	+		LRK53_RS06185	0.66	+0.9
1,418,192	+		LRK53_RS06185	0.66	+0.7
1,418,192	+		LRK53_RS06185	0.66	-1.0
1,418,192	+		LRK53_RS06185	0.66	-0.7
1,418,192	+		LRK53_RS06185	0.66	+0.9
1,418,192	+		LRK53_RS06185	0.66	-0.0
1,418,192	+		LRK53_RS06185	0.66	+1.9
1,418,192	+		LRK53_RS06185	0.66	-0.5
1,418,192	+		LRK53_RS06185	0.66	-0.7
1,418,192	+		LRK53_RS06185	0.66	-0.5
1,418,192	+		LRK53_RS06185	0.66	+1.8
1,418,192	+		LRK53_RS06185	0.66	-2.7
1,418,192	+		LRK53_RS06185	0.66	-1.5
1,418,193	-		LRK53_RS06185	0.66	-0.2
1,418,193	-		LRK53_RS06185	0.66	-0.1
1,418,193	-		LRK53_RS06185	0.66	-0.7
1,418,193	-		LRK53_RS06185	0.66	+0.3
1,418,193	-		LRK53_RS06185	0.66	-1.2
1,418,193	-		LRK53_RS06185	0.66	-0.1
1,418,193	-		LRK53_RS06185	0.66	-1.3
1,418,193	-		LRK53_RS06185	0.66	+0.7
1,418,193	-		LRK53_RS06185	0.66	-1.2
1,418,193	-		LRK53_RS06185	0.66	-1.3
1,418,193	-		LRK53_RS06185	0.66	-1.0
1,418,193	-		LRK53_RS06185	0.66	-1.0
1,418,193	-		LRK53_RS06185	0.66	-0.9
1,418,193	-		LRK53_RS06185	0.66	-0.5
1,418,193	-		LRK53_RS06185	0.66	-1.9
1,418,198	+		LRK53_RS06185	0.67	+0.3
1,418,199	-		LRK53_RS06185	0.67	+0.3
1,418,199	-		LRK53_RS06185	0.67	-0.0
1,418,211	-		LRK53_RS06185	0.68	+0.3
1,418,348	+		LRK53_RS06185	0.77	+0.3
1,418,348	+		LRK53_RS06185	0.77	+0.3
1,418,348	+		LRK53_RS06185	0.77	+1.0
1,418,348	+		LRK53_RS06185	0.77	-0.8
1,418,348	+		LRK53_RS06185	0.77	+0.3
1,418,348	+		LRK53_RS06185	0.77	-1.5
1,418,348	+		LRK53_RS06185	0.77	-0.7
1,418,348	+		LRK53_RS06185	0.77	-2.6
1,418,349	-		LRK53_RS06185	0.77	-0.3
1,418,349	-		LRK53_RS06185	0.77	-1.7
1,418,349	-		LRK53_RS06185	0.77	+0.9
1,418,349	-		LRK53_RS06185	0.77	-0.9
1,418,349	-		LRK53_RS06185	0.77	+0.1
1,418,498	+		LRK53_RS06185	0.88	-0.7
1,418,499	-		LRK53_RS06185	0.88	-1.3
1,418,501	+		LRK53_RS06185	0.88	-2.2
1,418,501	+		LRK53_RS06185	0.88	+1.3
1,418,502	-		LRK53_RS06185	0.88	+0.3
1,418,502	-		LRK53_RS06185	0.88	-1.7
1,418,502	-		LRK53_RS06185	0.88	-1.2
1,418,502	-		LRK53_RS06185	0.88	-0.7
1,418,502	-		LRK53_RS06185	0.88	+1.3
1,418,502	-		LRK53_RS06185	0.88	-0.7
1,418,502	-		LRK53_RS06185	0.88	-0.3
1,418,546	+				-1.0
1,418,546	+				-0.7
1,418,547	-				+0.9
1,418,591	+				+0.3
1,418,592	-				-0.8
1,418,730	+				-0.1
1,418,730	+				+1.3
1,418,730	+				+0.9
1,418,730	+				-0.3
1,418,731	-				+0.8
1,418,731	-				+1.3
1,418,731	-				+0.3
1,418,731	-				-2.0
1,418,731	-				-0.7
1,418,742	+				+0.3
1,418,742	+				+0.1
1,418,742	+				-1.8
1,418,742	+				+1.3
1,418,742	+				+0.7
1,418,742	+				+2.3
1,418,742	+				-0.7
1,418,743	-				+1.1
1,418,743	-				-1.8
1,418,743	-				-2.2
1,418,743	-				+0.1
1,418,743	-				+0.9
1,418,743	-				-2.2
1,418,743	-				-0.7
1,418,743	-				+0.2
1,418,743	-				-0.3
1,418,743	-				-0.7
1,418,768	-				+0.9
1,418,844	+		LRK53_RS06190	0.21	-0.5
1,418,845	-		LRK53_RS06190	0.23	+0.7
1,418,878	+				-2.0
1,418,879	-				+3.0
1,418,879	-				-0.3
1,418,890	+				-0.9
1,418,890	+				-0.9
1,418,890	+				-2.8
1,418,890	+				-0.5
1,418,890	+				-1.0
1,418,890	+				+1.3
1,418,890	+				+1.3
1,418,890	+				-1.2
1,418,890	+				+0.9
1,418,891	-				-0.7
1,418,891	-				-1.7
1,418,891	-				-1.0
1,418,891	-				+0.5
1,418,891	-				-1.3
1,418,891	-				-0.6
1,418,891	-				+2.6
1,418,891	-				-0.8
1,418,891	-				-0.4
1,418,891	-				+0.7
1,418,891	-				-0.3
1,418,946	+		LRK53_RS06195	0.14	-0.4
1,418,946	+		LRK53_RS06195	0.14	+0.3
1,419,010	+		LRK53_RS06195	0.25	+0.0
1,419,061	+		LRK53_RS06195	0.33	-0.1
1,419,061	+		LRK53_RS06195	0.33	-0.5
1,419,061	+		LRK53_RS06195	0.33	-0.7
1,419,061	+		LRK53_RS06195	0.33	-0.1
1,419,061	+		LRK53_RS06195	0.33	+2.3
1,419,061	+		LRK53_RS06195	0.33	-0.7
1,419,061	+		LRK53_RS06195	0.33	+0.4
1,419,062	-		LRK53_RS06195	0.34	-2.4
1,419,062	-		LRK53_RS06195	0.34	-1.3
1,419,062	-		LRK53_RS06195	0.34	-2.3
1,419,062	-		LRK53_RS06195	0.34	-1.6
1,419,062	-		LRK53_RS06195	0.34	+0.3
1,419,302	+		LRK53_RS06195	0.74	-1.7
1,419,303	-		LRK53_RS06195	0.74	-0.0
1,419,303	-		LRK53_RS06195	0.74	-0.3
1,419,304	+		LRK53_RS06195	0.74	-1.6
1,419,304	+		LRK53_RS06195	0.74	+0.3
1,419,304	+		LRK53_RS06195	0.74	-1.0
1,419,304	+		LRK53_RS06195	0.74	+0.9
1,419,304	+		LRK53_RS06195	0.74	-0.7
1,419,304	+		LRK53_RS06195	0.74	-1.0
1,419,304	+		LRK53_RS06195	0.74	-1.7
1,419,304	+		LRK53_RS06195	0.74	-1.7
1,419,304	+		LRK53_RS06195	0.74	-0.5
1,419,320	-		LRK53_RS06195	0.77	+0.7
1,419,320	-		LRK53_RS06195	0.77	+0.0
1,419,320	-		LRK53_RS06195	0.77	+1.3
1,419,432	+				+0.5
1,419,433	-				-0.7
1,419,694	+				+1.6
1,419,764	-				-0.3
1,419,880	+				-1.0
1,419,880	+				+1.9
1,419,974	-		LRK53_RS06200	0.16	-1.3
1,419,974	-		LRK53_RS06200	0.16	-0.5
1,420,063	-		LRK53_RS06200	0.22	-0.3
1,420,105	+		LRK53_RS06200	0.24	+0.3
1,420,105	+		LRK53_RS06200	0.24	-0.9
1,420,106	-		LRK53_RS06200	0.24	-0.2
1,420,106	-		LRK53_RS06200	0.24	+0.3
1,420,106	-		LRK53_RS06200	0.24	+0.8
1,420,106	-		LRK53_RS06200	0.24	-1.2
1,420,108	+		LRK53_RS06200	0.25	+0.9
1,420,108	+		LRK53_RS06200	0.25	-0.0
1,420,108	+		LRK53_RS06200	0.25	-0.5
1,420,108	+		LRK53_RS06200	0.25	+0.2
1,420,108	+		LRK53_RS06200	0.25	-0.9
1,420,108	+		LRK53_RS06200	0.25	+0.1
1,420,108	+		LRK53_RS06200	0.25	-1.5
1,420,108	+		LRK53_RS06200	0.25	+0.4
1,420,109	-		LRK53_RS06200	0.25	-0.9
1,420,109	-		LRK53_RS06200	0.25	+0.2
1,420,109	-		LRK53_RS06200	0.25	-0.2
1,420,193	-		LRK53_RS06200	0.30	+0.2
1,420,315	+		LRK53_RS06200	0.38	-0.8
1,420,316	-		LRK53_RS06200	0.38	+1.3