Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06130

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,405,962	+				+0.3
1,405,962	+				-0.3
1,405,962	+				+0.5
1,405,962	+				+0.5
1,405,962	+				-0.3
1,405,962	+				+0.1
1,405,962	+				+0.7
1,405,962	+				+0.5
1,405,963	-				-0.7
1,405,963	-				-0.8
1,405,963	-				-1.0
1,405,963	-				-1.6
1,405,963	-				-1.2
1,405,963	-				+0.3
1,405,963	-				-0.8
1,405,963	-				+0.8
1,406,109	-				-1.0
1,406,146	+				-0.1
1,406,146	+				-1.0
1,406,146	+				-0.3
1,406,146	+				+0.3
1,406,147	-				+0.6
1,406,147	-				-1.2
1,406,147	-				-2.9
1,406,217	+				-1.5
1,406,218	-				+1.3
1,406,276	+				-0.2
1,406,276	+				+1.9
1,406,276	+				+1.7
1,406,276	+				-0.0
1,406,276	+				-2.2
1,406,276	+				+1.3
1,406,276	+				+0.3
1,406,277	-				-0.7
1,406,277	-				-0.3
1,406,277	-				+1.5
1,406,290	+				-1.7
1,406,291	-				-1.9
1,406,304	+				+2.3
1,406,304	+				-0.2
1,406,304	+				-0.8
1,406,304	+				+0.5
1,406,305	-				-0.9
1,406,305	-				-0.7
1,406,305	-				+0.8
1,406,343	+				+0.3
1,406,343	+				-2.2
1,406,343	+				-0.1
1,406,344	-				+0.3
1,406,344	-				-0.7
1,406,344	-				-0.2
1,406,344	-				-2.0
1,406,344	-				-0.6
1,406,344	-				+1.3
1,406,384	+				-1.0
1,406,385	-				+1.3
1,406,385	-				-1.3
1,406,409	-				+0.3
1,406,621	+		LRK53_RS06130	0.11	+1.5
1,406,621	+		LRK53_RS06130	0.11	-0.7
1,406,621	+		LRK53_RS06130	0.11	+0.3
1,406,622	-		LRK53_RS06130	0.11	-1.7
1,406,622	-		LRK53_RS06130	0.11	-0.3
1,406,622	-		LRK53_RS06130	0.11	+1.6
1,406,622	-		LRK53_RS06130	0.11	+2.9
1,406,622	-		LRK53_RS06130	0.11	-0.4
1,406,639	+		LRK53_RS06130	0.11	+3.6
1,406,640	-		LRK53_RS06130	0.11	+0.7
1,406,846	+		LRK53_RS06130	0.21	-1.3
1,406,847	-		LRK53_RS06130	0.21	-0.3
1,406,879	+		LRK53_RS06130	0.23	-0.3
1,406,879	+		LRK53_RS06130	0.23	+0.2
1,406,891	+		LRK53_RS06130	0.23	-1.6
1,406,891	+		LRK53_RS06130	0.23	+1.3
1,406,891	+		LRK53_RS06130	0.23	-1.0
1,406,891	+		LRK53_RS06130	0.23	-1.0
1,406,891	+		LRK53_RS06130	0.23	+0.3
1,406,892	-		LRK53_RS06130	0.23	-1.0
1,406,892	-		LRK53_RS06130	0.23	-0.5
1,406,892	-		LRK53_RS06130	0.23	-0.3
1,406,892	-		LRK53_RS06130	0.23	+1.3
1,406,892	-		LRK53_RS06130	0.23	-0.4
1,407,026	+		LRK53_RS06130	0.30	-1.4
1,407,026	+		LRK53_RS06130	0.30	+0.7
1,407,026	+		LRK53_RS06130	0.30	-2.5
1,407,026	+		LRK53_RS06130	0.30	-1.2
1,407,026	+		LRK53_RS06130	0.30	-1.5
1,407,026	+		LRK53_RS06130	0.30	-1.7
1,407,027	-		LRK53_RS06130	0.30	+1.0
1,407,027	-		LRK53_RS06130	0.30	-0.3
1,407,027	-		LRK53_RS06130	0.30	-0.9
1,407,027	-		LRK53_RS06130	0.30	-0.4
1,407,027	-		LRK53_RS06130	0.30	+0.3
1,407,027	-		LRK53_RS06130	0.30	-0.9
1,407,032	+		LRK53_RS06130	0.30	+0.3
1,407,032	+		LRK53_RS06130	0.30	+0.5
1,407,033	-		LRK53_RS06130	0.30	-1.4
1,407,044	+		LRK53_RS06130	0.31	-1.2
1,407,044	+		LRK53_RS06130	0.31	+1.3
1,407,044	+		LRK53_RS06130	0.31	-1.4
1,407,044	+		LRK53_RS06130	0.31	-0.8
1,407,044	+		LRK53_RS06130	0.31	-0.6
1,407,044	+		LRK53_RS06130	0.31	+1.0
1,407,191	+		LRK53_RS06130	0.37	-0.4
1,407,192	-		LRK53_RS06130	0.37	-0.1
1,407,192	-		LRK53_RS06130	0.37	-2.2
1,407,192	-		LRK53_RS06130	0.37	+0.3
1,407,242	+		LRK53_RS06130	0.40	+1.0
1,407,242	+		LRK53_RS06130	0.40	+0.3
1,407,242	+		LRK53_RS06130	0.40	+1.3
1,407,242	+		LRK53_RS06130	0.40	-1.2
1,407,242	+		LRK53_RS06130	0.40	+1.1
1,407,242	+		LRK53_RS06130	0.40	+0.1
1,407,242	+		LRK53_RS06130	0.40	-1.0
1,407,242	+		LRK53_RS06130	0.40	-0.7
1,407,242	+		LRK53_RS06130	0.40	+2.3
1,407,242	+		LRK53_RS06130	0.40	-1.0
1,407,242	+		LRK53_RS06130	0.40	-1.0
1,407,242	+		LRK53_RS06130	0.40	-2.8
1,407,242	+		LRK53_RS06130	0.40	-0.7
1,407,242	+		LRK53_RS06130	0.40	-0.3
1,407,242	+		LRK53_RS06130	0.40	+1.3
1,407,243	-		LRK53_RS06130	0.40	+0.7
1,407,243	-		LRK53_RS06130	0.40	+0.3
1,407,243	-		LRK53_RS06130	0.40	+0.3
1,407,243	-		LRK53_RS06130	0.40	+0.3
1,407,243	-		LRK53_RS06130	0.40	-0.7
1,407,243	-		LRK53_RS06130	0.40	-0.7
1,407,243	-		LRK53_RS06130	0.40	-2.7
1,407,243	-		LRK53_RS06130	0.40	-1.3
1,407,243	-		LRK53_RS06130	0.40	-0.1
1,407,243	-		LRK53_RS06130	0.40	-0.9
1,407,243	-		LRK53_RS06130	0.40	+0.7
1,407,243	-		LRK53_RS06130	0.40	-0.6
1,407,243	-		LRK53_RS06130	0.40	-1.6
1,407,243	-		LRK53_RS06130	0.40	+0.3
1,407,243	-		LRK53_RS06130	0.40	+0.6
1,407,251	+		LRK53_RS06130	0.40	-0.7
1,407,251	+		LRK53_RS06130	0.40	-1.3
1,407,251	+		LRK53_RS06130	0.40	-1.7
1,407,252	-		LRK53_RS06130	0.40	-0.3
1,407,252	-		LRK53_RS06130	0.40	+1.3
1,407,252	-		LRK53_RS06130	0.40	-0.7
1,407,252	-		LRK53_RS06130	0.40	-1.3
1,407,252	-		LRK53_RS06130	0.40	-2.5
1,407,299	+		LRK53_RS06130	0.43	-1.5
1,407,299	+		LRK53_RS06130	0.43	-0.3
1,407,299	+		LRK53_RS06130	0.43	-0.7
1,407,299	+		LRK53_RS06130	0.43	-0.7
1,407,299	+		LRK53_RS06130	0.43	+1.3
1,407,299	+		LRK53_RS06130	0.43	-1.9
1,407,299	+		LRK53_RS06130	0.43	-0.7
1,407,299	+		LRK53_RS06130	0.43	-2.2
1,407,300	-		LRK53_RS06130	0.43	+1.3
1,407,300	-		LRK53_RS06130	0.43	-2.6
1,407,311	+		LRK53_RS06130	0.43	+0.1
1,407,311	+		LRK53_RS06130	0.43	-0.6
1,407,312	-		LRK53_RS06130	0.43	+2.0
1,407,344	+		LRK53_RS06130	0.45	+1.3
1,407,344	+		LRK53_RS06130	0.45	-1.5
1,407,344	+		LRK53_RS06130	0.45	-0.2
1,407,344	+		LRK53_RS06130	0.45	-0.6
1,407,344	+		LRK53_RS06130	0.45	-1.3
1,407,344	+		LRK53_RS06130	0.45	-0.2
1,407,344	+		LRK53_RS06130	0.45	+0.9
1,407,344	+		LRK53_RS06130	0.45	-1.2
1,407,345	-		LRK53_RS06130	0.45	-0.3
1,407,345	-		LRK53_RS06130	0.45	+0.1
1,407,345	-		LRK53_RS06130	0.45	-0.6
1,407,345	-		LRK53_RS06130	0.45	+0.3
1,407,372	-		LRK53_RS06130	0.46	+0.3
1,407,419	+		LRK53_RS06130	0.48	-0.3
1,407,446	+		LRK53_RS06130	0.49	-0.7
1,407,447	-		LRK53_RS06130	0.49	-1.4
1,407,447	-		LRK53_RS06130	0.49	-0.0
1,407,447	-		LRK53_RS06130	0.49	+0.5
1,407,447	-		LRK53_RS06130	0.49	+0.5
1,407,479	+		LRK53_RS06130	0.51	+1.3
1,407,480	-		LRK53_RS06130	0.51	-1.0
1,407,513	-		LRK53_RS06130	0.53	-0.7
1,407,653	+		LRK53_RS06130	0.59	-0.3
1,407,653	+		LRK53_RS06130	0.59	-2.3
1,407,654	-		LRK53_RS06130	0.59	+0.1
1,407,668	+		LRK53_RS06130	0.60	-1.4
1,407,669	-		LRK53_RS06130	0.60	-0.1
1,407,669	-		LRK53_RS06130	0.60	-1.2
1,407,669	-		LRK53_RS06130	0.60	+1.3
1,407,669	-		LRK53_RS06130	0.60	-1.3
1,407,713	-		LRK53_RS06130	0.62	-0.9
1,407,755	+		LRK53_RS06130	0.64	-0.3
1,407,755	+		LRK53_RS06130	0.64	-0.7
1,407,755	+		LRK53_RS06130	0.64	+0.3
1,407,756	-		LRK53_RS06130	0.64	-1.5
1,407,756	-		LRK53_RS06130	0.64	+0.5
1,407,756	-		LRK53_RS06130	0.64	-0.0
1,407,824	+		LRK53_RS06130	0.67	+0.1
1,407,825	-		LRK53_RS06130	0.67	-0.3
1,407,825	-		LRK53_RS06130	0.67	-0.9
1,407,825	-		LRK53_RS06130	0.67	-0.8
1,407,825	-		LRK53_RS06130	0.67	-0.4
1,407,825	-		LRK53_RS06130	0.67	-0.2
1,407,825	-		LRK53_RS06130	0.67	+1.3
1,407,962	+		LRK53_RS06130	0.74	-1.7
1,407,962	+		LRK53_RS06130	0.74	+1.3
1,407,962	+		LRK53_RS06130	0.74	+0.5
1,407,962	+		LRK53_RS06130	0.74	+0.3
1,407,963	-		LRK53_RS06130	0.74	+1.3
1,407,963	-		LRK53_RS06130	0.74	+1.0
1,408,037	+		LRK53_RS06130	0.77	-0.3
1,408,037	+		LRK53_RS06130	0.77	-0.1
1,408,037	+		LRK53_RS06130	0.77	-0.3
1,408,037	+		LRK53_RS06130	0.77	-0.3
1,408,037	+		LRK53_RS06130	0.77	-0.9
1,408,038	-		LRK53_RS06130	0.77	-1.0
1,408,038	-		LRK53_RS06130	0.77	+0.7
1,408,038	-		LRK53_RS06130	0.77	-0.1
1,408,038	-		LRK53_RS06130	0.77	-0.3
1,408,038	-		LRK53_RS06130	0.77	-0.3
1,408,073	+		LRK53_RS06130	0.79	-1.9
1,408,073	+		LRK53_RS06130	0.79	-3.2
1,408,073	+		LRK53_RS06130	0.79	-1.9
1,408,074	-		LRK53_RS06130	0.79	-0.3
1,408,074	-		LRK53_RS06130	0.79	+0.7
1,408,088	+		LRK53_RS06130	0.80	+0.3
1,408,088	+		LRK53_RS06130	0.80	-1.0
1,408,088	+		LRK53_RS06130	0.80	-2.2
1,408,089	-		LRK53_RS06130	0.80	-1.5
1,408,089	-		LRK53_RS06130	0.80	-0.3
1,408,089	-		LRK53_RS06130	0.80	-0.6
1,408,089	-		LRK53_RS06130	0.80	+1.8
1,408,089	-		LRK53_RS06130	0.80	-0.3
1,408,142	+		LRK53_RS06130	0.82	+0.1
1,408,142	+		LRK53_RS06130	0.82	-0.7
1,408,142	+		LRK53_RS06130	0.82	+0.3
1,408,142	+		LRK53_RS06130	0.82	-1.3
1,408,142	+		LRK53_RS06130	0.82	-1.4
1,408,142	+		LRK53_RS06130	0.82	+1.3
1,408,142	+		LRK53_RS06130	0.82	+1.8
1,408,142	+		LRK53_RS06130	0.82	-1.2
1,408,142	+		LRK53_RS06130	0.82	+0.3
1,408,142	+		LRK53_RS06130	0.82	-0.9
1,408,143	-		LRK53_RS06130	0.82	-1.0
1,408,143	-		LRK53_RS06130	0.82	-0.7
1,408,143	-		LRK53_RS06130	0.82	-0.2
1,408,143	-		LRK53_RS06130	0.82	-0.2
1,408,143	-		LRK53_RS06130	0.82	-1.3
1,408,143	-		LRK53_RS06130	0.82	-0.1
1,408,143	-		LRK53_RS06130	0.82	-0.4
1,408,143	-		LRK53_RS06130	0.82	-0.3
1,408,143	-		LRK53_RS06130	0.82	+0.2
1,408,143	-		LRK53_RS06130	0.82	-0.4
1,408,143	-		LRK53_RS06130	0.82	-1.7
1,408,143	-		LRK53_RS06130	0.82	-0.7
1,408,143	-		LRK53_RS06130	0.82	-1.0
1,408,143	-		LRK53_RS06130	0.82	+1.0
1,408,143	-		LRK53_RS06130	0.82	+1.3
1,408,143	-		LRK53_RS06130	0.82	+0.9
1,408,143	-		LRK53_RS06130	0.82	-0.3
1,408,145	+		LRK53_RS06130	0.82	-0.3
1,408,145	+		LRK53_RS06130	0.82	-1.7
1,408,145	+		LRK53_RS06130	0.82	+1.3
1,408,145	+		LRK53_RS06130	0.82	-0.3
1,408,145	+		LRK53_RS06130	0.82	-0.6
1,408,145	+		LRK53_RS06130	0.82	-0.3
1,408,145	+		LRK53_RS06130	0.82	+0.3
1,408,145	+		LRK53_RS06130	0.82	+1.3
1,408,145	+		LRK53_RS06130	0.82	+1.1
1,408,145	+		LRK53_RS06130	0.82	-1.3
1,408,145	+		LRK53_RS06130	0.82	-1.5
1,408,145	+		LRK53_RS06130	0.82	-1.3
1,408,145	+		LRK53_RS06130	0.82	-1.2
1,408,145	+		LRK53_RS06130	0.82	+0.3
1,408,145	+		LRK53_RS06130	0.82	-0.7
1,408,145	+		LRK53_RS06130	0.82	+1.3
1,408,145	+		LRK53_RS06130	0.82	+0.3
1,408,145	+		LRK53_RS06130	0.82	-1.3
1,408,145	+		LRK53_RS06130	0.82	+0.5
1,408,145	+		LRK53_RS06130	0.82	+0.3
1,408,146	-		LRK53_RS06130	0.82	-1.4
1,408,146	-		LRK53_RS06130	0.82	+0.2
1,408,146	-		LRK53_RS06130	0.82	-0.5
1,408,146	-		LRK53_RS06130	0.82	+1.3
1,408,146	-		LRK53_RS06130	0.82	-2.9
1,408,146	-		LRK53_RS06130	0.82	-1.2
1,408,146	-		LRK53_RS06130	0.82	-0.3
1,408,146	-		LRK53_RS06130	0.82	-0.3
1,408,146	-		LRK53_RS06130	0.82	+0.9
1,408,146	-		LRK53_RS06130	0.82	-0.8
1,408,146	-		LRK53_RS06130	0.82	-1.6
1,408,146	-		LRK53_RS06130	0.82	-1.7
1,408,146	-		LRK53_RS06130	0.82	+0.2
1,408,146	-		LRK53_RS06130	0.82	-1.0
1,408,146	-		LRK53_RS06130	0.82	+0.3
1,408,146	-		LRK53_RS06130	0.82	-1.7
1,408,163	+		LRK53_RS06130	0.83	-1.7
1,408,163	+		LRK53_RS06130	0.83	+0.0
1,408,163	+		LRK53_RS06130	0.83	+1.3
1,408,164	-		LRK53_RS06130	0.83	-1.1
1,408,172	+		LRK53_RS06130	0.84	+0.3
1,408,172	+		LRK53_RS06130	0.84	-1.0
1,408,199	+		LRK53_RS06130	0.85	+1.0
1,408,199	+		LRK53_RS06130	0.85	+1.5
1,408,199	+		LRK53_RS06130	0.85	-0.2
1,408,199	+		LRK53_RS06130	0.85	-0.8
1,408,200	-		LRK53_RS06130	0.85	+1.3
1,408,200	-		LRK53_RS06130	0.85	+1.3
1,408,200	-		LRK53_RS06130	0.85	-1.2
1,408,200	-		LRK53_RS06130	0.85	+0.3
1,408,283	+		LRK53_RS06130	0.89	-0.7
1,408,283	+		LRK53_RS06130	0.89	-1.0
1,408,283	+		LRK53_RS06130	0.89	+1.3
1,408,283	+		LRK53_RS06130	0.89	-0.5
1,408,283	+		LRK53_RS06130	0.89	-0.5
1,408,283	+		LRK53_RS06130	0.89	-0.7
1,408,284	-		LRK53_RS06130	0.89	+0.3
1,408,284	-		LRK53_RS06130	0.89	+0.3
1,408,284	-		LRK53_RS06130	0.89	-1.5
1,408,355	+				-0.7
1,408,355	+				-1.5
1,408,355	+				+1.3
1,408,355	+				-2.8
1,408,355	+				-1.5
1,408,355	+				+0.9
1,408,355	+				-0.0
1,408,356	-				-1.0
1,408,356	-				-0.4
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