Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05985

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,379,424	+		LRK53_RS05980	0.14	-0.7
1,379,425	-		LRK53_RS05980	0.14	+0.3
1,379,425	-		LRK53_RS05980	0.14	+1.3
1,379,425	-		LRK53_RS05980	0.14	+0.7
1,379,425	-		LRK53_RS05980	0.14	-1.0
1,379,428	+		LRK53_RS05980	0.14	-0.5
1,379,428	+		LRK53_RS05980	0.14	-0.3
1,379,428	+		LRK53_RS05980	0.14	+1.8
1,379,428	+		LRK53_RS05980	0.14	-2.8
1,379,428	+		LRK53_RS05980	0.14	+0.1
1,379,428	+		LRK53_RS05980	0.14	+1.8
1,379,429	-		LRK53_RS05980	0.14	+1.0
1,379,429	-		LRK53_RS05980	0.14	+0.3
1,379,429	-		LRK53_RS05980	0.14	+0.8
1,379,429	-		LRK53_RS05980	0.14	+0.7
1,379,429	-		LRK53_RS05980	0.14	-1.0
1,379,429	-		LRK53_RS05980	0.14	-0.3
1,379,459	+		LRK53_RS05980	0.17	+1.3
1,379,460	-		LRK53_RS05980	0.17	-1.9
1,379,541	-		LRK53_RS05980	0.25	-0.0
1,379,557	+		LRK53_RS05980	0.26	-1.0
1,379,557	+		LRK53_RS05980	0.26	-1.0
1,379,557	+		LRK53_RS05980	0.26	-0.7
1,379,557	+		LRK53_RS05980	0.26	-3.0
1,379,557	+		LRK53_RS05980	0.26	-0.3
1,379,557	+		LRK53_RS05980	0.26	-1.3
1,379,557	+		LRK53_RS05980	0.26	-0.4
1,379,557	+		LRK53_RS05980	0.26	-1.0
1,379,558	-		LRK53_RS05980	0.26	+0.0
1,379,558	-		LRK53_RS05980	0.26	-0.7
1,379,558	-		LRK53_RS05980	0.26	-0.4
1,379,558	-		LRK53_RS05980	0.26	+2.4
1,379,608	+		LRK53_RS05980	0.31	-1.0
1,379,648	-		LRK53_RS05980	0.35	+0.5
1,379,680	-		LRK53_RS05980	0.38	-0.0
1,379,680	-		LRK53_RS05980	0.38	-0.3
1,379,680	-		LRK53_RS05980	0.38	-0.7
1,379,680	-		LRK53_RS05980	0.38	+1.3
1,379,683	+		LRK53_RS05980	0.38	-1.5
1,379,683	+		LRK53_RS05980	0.38	+0.3
1,379,683	+		LRK53_RS05980	0.38	-0.5
1,379,684	-		LRK53_RS05980	0.38	-0.1
1,379,684	-		LRK53_RS05980	0.38	-1.5
1,379,684	-		LRK53_RS05980	0.38	-0.3
1,379,709	+		LRK53_RS05980	0.40	+1.3
1,379,709	+		LRK53_RS05980	0.40	-0.8
1,379,710	-		LRK53_RS05980	0.40	-1.5
1,379,736	+		LRK53_RS05980	0.43	-0.0
1,379,736	+		LRK53_RS05980	0.43	+0.1
1,379,736	+		LRK53_RS05980	0.43	-1.9
1,379,736	+		LRK53_RS05980	0.43	-1.3
1,379,736	+		LRK53_RS05980	0.43	+0.5
1,379,737	-		LRK53_RS05980	0.43	+1.8
1,379,931	+		LRK53_RS05980	0.61	+0.4
1,379,931	+		LRK53_RS05980	0.61	-0.5
1,379,931	+		LRK53_RS05980	0.61	-0.3
1,379,932	-		LRK53_RS05980	0.61	-0.2
1,379,932	-		LRK53_RS05980	0.61	-0.7
1,379,955	-		LRK53_RS05980	0.63	+1.3
1,379,972	+		LRK53_RS05980	0.65	-0.1
1,379,972	+		LRK53_RS05980	0.65	+1.3
1,379,973	-		LRK53_RS05980	0.65	-0.5
1,379,973	-		LRK53_RS05980	0.65	-0.0
1,380,010	+		LRK53_RS05980	0.69	-1.9
1,380,010	+		LRK53_RS05980	0.69	+0.3
1,380,011	-		LRK53_RS05980	0.69	-1.3
1,380,011	-		LRK53_RS05980	0.69	-0.8
1,380,011	-		LRK53_RS05980	0.69	-2.0
1,380,011	-		LRK53_RS05980	0.69	+0.3
1,380,011	-		LRK53_RS05980	0.69	+1.9
1,380,035	+		LRK53_RS05980	0.71	-0.5
1,380,035	+		LRK53_RS05980	0.71	+0.1
1,380,036	-		LRK53_RS05980	0.71	+1.3
1,380,036	-		LRK53_RS05980	0.71	-1.0
1,380,036	-		LRK53_RS05980	0.71	-0.5
1,380,036	-		LRK53_RS05980	0.71	-1.0
1,380,039	+		LRK53_RS05980	0.71	-2.3
1,380,039	+		LRK53_RS05980	0.71	+0.1
1,380,039	+		LRK53_RS05980	0.71	+1.3
1,380,039	+		LRK53_RS05980	0.71	-2.2
1,380,039	+		LRK53_RS05980	0.71	+1.3
1,380,040	-		LRK53_RS05980	0.71	+0.9
1,380,040	-		LRK53_RS05980	0.71	+1.3
1,380,040	-		LRK53_RS05980	0.71	-1.0
1,380,040	-		LRK53_RS05980	0.71	-1.5
1,380,040	-		LRK53_RS05980	0.71	+1.9
1,380,046	+		LRK53_RS05980	0.72	+1.1
1,380,061	+		LRK53_RS05980	0.73	+0.3
1,380,061	+		LRK53_RS05980	0.73	+1.3
1,380,062	-		LRK53_RS05980	0.73	-1.0
1,380,062	-		LRK53_RS05980	0.73	-2.7
1,380,168	-		LRK53_RS05980	0.83	-1.0
1,380,224	+		LRK53_RS05980	0.89	-0.0
1,380,224	+		LRK53_RS05980	0.89	-1.9
1,380,225	-		LRK53_RS05980	0.89	+1.3
1,380,298	+				+0.3
1,380,298	+				-2.0
1,380,298	+				-0.1
1,380,299	-				+0.0
1,380,299	-				-1.5
1,380,299	-				+1.3
1,380,328	-				+1.0
1,380,433	-				+0.1
1,380,439	-				+0.9
1,380,456	+				+2.5
1,380,456	+				-2.0
1,380,456	+				-0.3
1,380,457	-				+0.3
1,380,457	-				-0.3
1,380,457	-				-0.8
1,380,457	-				+0.4
1,380,533	+		LRK53_RS05985	0.18	+0.9
1,380,533	+		LRK53_RS05985	0.18	-1.8
1,380,533	+		LRK53_RS05985	0.18	-0.2
1,380,534	-		LRK53_RS05985	0.18	-0.3
1,380,547	+		LRK53_RS05985	0.19	-0.6
1,380,548	-		LRK53_RS05985	0.19	+0.3
1,380,548	-		LRK53_RS05985	0.19	-0.0
1,380,548	-		LRK53_RS05985	0.19	+0.7
1,380,558	+		LRK53_RS05985	0.20	+1.3
1,380,558	+		LRK53_RS05985	0.20	+1.3
1,380,558	+		LRK53_RS05985	0.20	-1.5
1,380,559	-		LRK53_RS05985	0.20	-0.2
1,380,559	-		LRK53_RS05985	0.20	-0.3
1,380,568	-		LRK53_RS05985	0.21	+1.9
1,380,568	-		LRK53_RS05985	0.21	-2.0
1,380,570	+		LRK53_RS05985	0.21	-1.2
1,380,570	+		LRK53_RS05985	0.21	-0.3
1,380,570	+		LRK53_RS05985	0.21	-1.2
1,380,570	+		LRK53_RS05985	0.21	+1.7
1,380,570	+		LRK53_RS05985	0.21	+0.3
1,380,570	+		LRK53_RS05985	0.21	-0.7
1,380,570	+		LRK53_RS05985	0.21	+0.3
1,380,571	-		LRK53_RS05985	0.21	+1.3
1,380,571	-		LRK53_RS05985	0.21	+0.5
1,380,597	+		LRK53_RS05985	0.24	+0.9
1,380,597	+		LRK53_RS05985	0.24	+0.3
1,380,598	-		LRK53_RS05985	0.24	+0.8
1,380,598	-		LRK53_RS05985	0.24	+1.6
1,380,598	-		LRK53_RS05985	0.24	-0.7
1,380,598	-		LRK53_RS05985	0.24	+0.3
1,380,638	+		LRK53_RS05985	0.28	+0.0
1,380,645	+		LRK53_RS05985	0.29	-0.6
1,380,646	-		LRK53_RS05985	0.29	-0.3
1,380,715	+		LRK53_RS05985	0.36	-0.3
1,380,715	+		LRK53_RS05985	0.36	-1.3
1,380,715	+		LRK53_RS05985	0.36	+3.6
1,380,716	-		LRK53_RS05985	0.36	-2.4
1,380,716	-		LRK53_RS05985	0.36	-0.1
1,380,716	-		LRK53_RS05985	0.36	+0.5
1,380,716	-		LRK53_RS05985	0.36	-0.5
1,380,747	+		LRK53_RS05985	0.39	+1.0
1,380,748	-		LRK53_RS05985	0.39	-0.4
1,380,748	-		LRK53_RS05985	0.39	+0.1
1,380,871	+		LRK53_RS05985	0.51	-0.3
1,380,872	-		LRK53_RS05985	0.51	+2.9
1,380,872	-		LRK53_RS05985	0.51	-1.6
1,381,055	+		LRK53_RS05985	0.70	-1.5
1,381,060	+		LRK53_RS05985	0.70	+0.5
1,381,060	+		LRK53_RS05985	0.70	-0.1
1,381,060	+		LRK53_RS05985	0.70	-0.4
1,381,060	+		LRK53_RS05985	0.70	-1.0
1,381,060	+		LRK53_RS05985	0.70	-0.4
1,381,060	+		LRK53_RS05985	0.70	-1.5
1,381,060	+		LRK53_RS05985	0.70	+0.5
1,381,060	+		LRK53_RS05985	0.70	+1.1
1,381,060	+		LRK53_RS05985	0.70	+1.3
1,381,060	+		LRK53_RS05985	0.70	-0.7
1,381,060	+		LRK53_RS05985	0.70	-0.7
1,381,060	+		LRK53_RS05985	0.70	+2.3
1,381,061	-		LRK53_RS05985	0.70	-0.7
1,381,061	-		LRK53_RS05985	0.70	-0.7
1,381,061	-		LRK53_RS05985	0.70	-0.7
1,381,061	-		LRK53_RS05985	0.70	-1.0
1,381,061	-		LRK53_RS05985	0.70	-0.5
1,381,061	-		LRK53_RS05985	0.70	-1.3
1,381,061	-		LRK53_RS05985	0.70	+1.1
1,381,129	+		LRK53_RS05985	0.77	-1.2
1,381,215	+		LRK53_RS05985	0.86	-0.3
1,381,215	+		LRK53_RS05985	0.86	-1.5
1,381,215	+		LRK53_RS05985	0.86	-0.6
1,381,215	+		LRK53_RS05985	0.86	+0.1
1,381,215	+		LRK53_RS05985	0.86	+0.7
1,381,215	+		LRK53_RS05985	0.86	+0.1
1,381,215	+		LRK53_RS05985	0.86	-0.3
1,381,215	+		LRK53_RS05985	0.86	-0.3
1,381,215	+		LRK53_RS05985	0.86	+1.6
1,381,215	+		LRK53_RS05985	0.86	-0.7
1,381,215	+		LRK53_RS05985	0.86	-0.4
1,381,215	+		LRK53_RS05985	0.86	-0.3
1,381,215	+		LRK53_RS05985	0.86	+0.8
1,381,215	+		LRK53_RS05985	0.86	+0.1
1,381,215	+		LRK53_RS05985	0.86	+0.3
1,381,215	+		LRK53_RS05985	0.86	+0.6
1,381,215	+		LRK53_RS05985	0.86	-1.2
1,381,215	+		LRK53_RS05985	0.86	+2.9
1,381,215	+		LRK53_RS05985	0.86	-1.3
1,381,215	+		LRK53_RS05985	0.86	-0.7
1,381,216	-		LRK53_RS05985	0.86	+0.8
1,381,216	-		LRK53_RS05985	0.86	+1.0
1,381,216	-		LRK53_RS05985	0.86	-0.5
1,381,216	-		LRK53_RS05985	0.86	+0.5
1,381,216	-		LRK53_RS05985	0.86	-1.5
1,381,216	-		LRK53_RS05985	0.86	+1.3
1,381,216	-		LRK53_RS05985	0.86	-1.3
1,381,216	-		LRK53_RS05985	0.86	-0.7
1,381,216	-		LRK53_RS05985	0.86	-0.7
1,381,216	-		LRK53_RS05985	0.86	-0.3
1,381,216	-		LRK53_RS05985	0.86	+1.3
1,381,216	-		LRK53_RS05985	0.86	-2.5
1,381,216	-		LRK53_RS05985	0.86	-0.7
1,381,216	-		LRK53_RS05985	0.86	-0.2
1,381,216	-		LRK53_RS05985	0.86	-0.3
1,381,216	-		LRK53_RS05985	0.86	+0.8
1,381,216	-		LRK53_RS05985	0.86	-0.3
1,381,216	-		LRK53_RS05985	0.86	-0.7
1,381,216	-		LRK53_RS05985	0.86	-1.0
1,381,250	+		LRK53_RS05985	0.89	-1.5
1,381,250	+		LRK53_RS05985	0.89	+0.7
1,381,251	-		LRK53_RS05985	0.89	+0.7
1,381,251	-		LRK53_RS05985	0.89	-0.7
1,381,251	-		LRK53_RS05985	0.89	+1.8
1,381,251	-		LRK53_RS05985	0.89	+0.3
1,381,391	+				-0.6
1,381,391	+				-1.7
1,381,391	+				-0.7
1,381,391	+				-0.8
1,381,391	+				-0.7
1,381,392	-				+1.3
1,381,392	-				+0.1
1,381,392	-				+0.3
1,381,392	-				-1.0
1,381,408	+				-0.0
1,381,408	+				+1.3
1,381,408	+				-1.7
1,381,408	+				+0.5
1,381,409	-				+0.7
1,381,414	+				+0.3
1,381,414	+				-0.3
1,381,414	+				+0.3
1,381,414	+				+0.3
1,381,414	+				+1.5
1,381,414	+				-1.5
1,381,414	+				-1.0
1,381,414	+				-1.3
1,381,414	+				-1.7
1,381,414	+				+1.3
1,381,414	+				+1.3
1,381,414	+				+0.9
1,381,414	+				-0.7
1,381,414	+				+2.6
1,381,414	+				-1.0
1,381,414	+				+0.1
1,381,414	+				-0.4
1,381,414	+				-1.2
1,381,414	+				-1.2
1,381,414	+				-1.2
1,381,414	+				+0.3
1,381,414	+				-0.7
1,381,414	+				-1.9
1,381,415	-				+1.1
1,381,415	-				+0.3
1,381,415	-				-0.6
1,381,415	-				-1.5
1,381,415	-				-0.3
1,381,415	-				+2.3
1,381,415	-				-1.0
1,381,415	-				-0.6
1,381,415	-				+0.3
1,381,462	-		LRK53_RS05990	0.12	-0.3
1,381,462	-		LRK53_RS05990	0.12	+0.3
1,381,699	+		LRK53_RS05990	0.40	+1.3
1,381,700	-		LRK53_RS05990	0.40	+0.4
1,381,700	-		LRK53_RS05990	0.40	-0.4
1,381,760	+		LRK53_RS05990	0.47	-0.6
1,381,760	+		LRK53_RS05990	0.47	+1.5
1,381,760	+		LRK53_RS05990	0.47	-0.6
1,381,760	+		LRK53_RS05990	0.47	-0.3
1,381,760	+		LRK53_RS05990	0.47	-0.3
1,381,760	+		LRK53_RS05990	0.47	+2.9
1,381,760	+		LRK53_RS05990	0.47	+1.0
1,381,761	-		LRK53_RS05990	0.47	+1.3
1,381,761	-		LRK53_RS05990	0.47	-1.0
1,381,761	-		LRK53_RS05990	0.47	+0.9
1,381,761	-		LRK53_RS05990	0.47	-1.4
1,381,761	-		LRK53_RS05990	0.47	+0.3
1,381,761	-		LRK53_RS05990	0.47	+0.7
1,381,808	+		LRK53_RS05990	0.53	+0.5
1,381,808	+		LRK53_RS05990	0.53	+0.3
1,381,809	-		LRK53_RS05990	0.53	-1.5
1,381,818	-		LRK53_RS05990	0.54	+1.8
1,381,818	-		LRK53_RS05990	0.54	-0.3
1,381,892	+		LRK53_RS05990	0.63	+0.5
1,381,892	+		LRK53_RS05990	0.63	-0.7
1,381,892	+		LRK53_RS05990	0.63	+1.3
1,381,892	+		LRK53_RS05990	0.63	+0.2
1,381,892	+		LRK53_RS05990	0.63	+0.3
1,381,892	+		LRK53_RS05990	0.63	-0.2
1,381,892	+		LRK53_RS05990	0.63	+0.1
1,381,892	+		LRK53_RS05990	0.63	+0.1
1,381,893	-		LRK53_RS05990	0.63	-1.2
1,381,893	-		LRK53_RS05990	0.63	-1.3
1,381,893	-		LRK53_RS05990	0.63	+0.7
1,381,893	-		LRK53_RS05990	0.63	+0.5
1,381,893	-		LRK53_RS05990	0.63	-1.3
1,381,893	-		LRK53_RS05990	0.63	+0.1
1,381,893	-		LRK53_RS05990	0.63	+0.7
1,381,893	-		LRK53_RS05990	0.63	-0.1
1,381,949	+		LRK53_RS05990	0.69	-0.7
1,381,949	+		LRK53_RS05990	0.69	+0.3
1,381,949	+		LRK53_RS05990	0.69	-0.3
1,381,949	+		LRK53_RS05990	0.69	-1.3
1,381,949	+		LRK53_RS05990	0.69	+0.3
1,381,949	+		LRK53_RS05990	0.69	+0.9
1,381,949	+		LRK53_RS05990	0.69	+0.5
1,381,949	+		LRK53_RS05990	0.69	-1.1
1,381,949	+		LRK53_RS05990	0.69	+1.3
1,381,949	+		LRK53_RS05990	0.69	+0.3
1,381,949	+		LRK53_RS05990	0.69	-0.3
1,381,949	+		LRK53_RS05990	0.69	-1.2
1,381,949	+		LRK53_RS05990	0.69	-1.6
1,381,949	+		LRK53_RS05990	0.69	-1.0
1,381,949	+		LRK53_RS05990	0.69	+2.3
1,381,949	+		LRK53_RS05990	0.69	-0.0
1,381,949	+		LRK53_RS05990	0.69	-1.4
1,381,949	+		LRK53_RS05990	0.69	+0.3
1,381,950	-		LRK53_RS05990	0.69	-1.6
1,381,950	-		LRK53_RS05990	0.69	-0.3
1,381,950	-		LRK53_RS05990	0.69	-1.3
1,381,950	-		LRK53_RS05990	0.69	+0.3
1,381,950	-		LRK53_RS05990	0.69	-2.2
1,381,950	-		LRK53_RS05990	0.69	+0.1
1,381,950	-		LRK53_RS05990	0.69	+1.9
1,381,950	-		LRK53_RS05990	0.69	-0.5
1,381,950	-		LRK53_RS05990	0.69	-0.3
1,381,950	-		LRK53_RS05990	0.69	-1.2
1,381,950	-		LRK53_RS05990	0.69	-0.7
1,381,950	-		LRK53_RS05990	0.69	+0.8
1,382,013	-		LRK53_RS05990	0.77	-1.0
1,382,184	+				+0.3
1,382,190	+				-0.1
1,382,190	+				-1.3
1,382,190	+				-1.8
1,382,191	-				-1.5
1,382,191	-				-0.7
1,382,191	-				-0.0
1,382,251	+				+1.6
1,382,251	+				-0.1
1,382,251	+				+0.3
1,382,251	+				+0.1
1,382,251	+				-0.6
1,382,251	+				-0.1
1,382,252	-				+1.3
1,382,252	-				-1.2
1,382,320	-				+2.3
1,382,324	+				+1.3
1,382,324	+				-0.7
1,382,324	+				+0.7
1,382,324	+				+1.3
1,382,324	+				-0.2
1,382,324	+				-2.4
1,382,325	-				+1.5
1,382,325	-				+0.7
1,382,325	-				+2.3