Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04870

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,131,464	+		LRK53_RS04865	0.55	+0.1
1,131,464	+		LRK53_RS04865	0.55	-1.2
1,131,464	+		LRK53_RS04865	0.55	+0.5
1,131,465	-		LRK53_RS04865	0.55	-1.2
1,131,465	-		LRK53_RS04865	0.55	-1.8
1,131,465	-		LRK53_RS04865	0.55	+0.3
1,131,588	+		LRK53_RS04865	0.63	-0.1
1,131,588	+		LRK53_RS04865	0.63	-1.3
1,131,588	+		LRK53_RS04865	0.63	+1.8
1,131,588	+		LRK53_RS04865	0.63	-1.2
1,131,588	+		LRK53_RS04865	0.63	-2.5
1,131,589	-		LRK53_RS04865	0.63	-0.3
1,131,589	-		LRK53_RS04865	0.63	-0.3
1,131,589	-		LRK53_RS04865	0.63	-1.7
1,131,589	-		LRK53_RS04865	0.63	+0.2
1,131,726	+		LRK53_RS04865	0.73	+0.5
1,131,726	+		LRK53_RS04865	0.73	+2.4
1,131,726	+		LRK53_RS04865	0.73	-2.9
1,131,726	+		LRK53_RS04865	0.73	-0.7
1,131,727	-		LRK53_RS04865	0.73	+0.2
1,131,727	-		LRK53_RS04865	0.73	-1.0
1,131,727	-		LRK53_RS04865	0.73	-0.9
1,131,738	+		LRK53_RS04865	0.73	+0.3
1,131,825	+		LRK53_RS04865	0.79	-0.3
1,131,825	+		LRK53_RS04865	0.79	+1.3
1,131,825	+		LRK53_RS04865	0.79	-1.0
1,131,825	+		LRK53_RS04865	0.79	+0.5
1,131,825	+		LRK53_RS04865	0.79	-0.8
1,131,825	+		LRK53_RS04865	0.79	-0.4
1,131,825	+		LRK53_RS04865	0.79	+0.1
1,131,826	-		LRK53_RS04865	0.79	-0.5
1,131,826	-		LRK53_RS04865	0.79	-1.5
1,131,826	-		LRK53_RS04865	0.79	+0.7
1,131,826	-		LRK53_RS04865	0.79	-1.6
1,131,826	-		LRK53_RS04865	0.79	-0.2
1,131,826	-		LRK53_RS04865	0.79	-1.0
1,131,826	-		LRK53_RS04865	0.79	-0.9
1,131,826	-		LRK53_RS04865	0.79	-0.5
1,131,826	-		LRK53_RS04865	0.79	-0.2
1,131,846	+		LRK53_RS04865	0.81	-0.7
1,131,846	+		LRK53_RS04865	0.81	-2.3
1,131,846	+		LRK53_RS04865	0.81	+1.8
1,131,847	-		LRK53_RS04865	0.81	-0.4
1,131,847	-		LRK53_RS04865	0.81	+0.7
1,131,847	-		LRK53_RS04865	0.81	-0.9
1,131,847	-		LRK53_RS04865	0.81	+1.3
1,131,847	-		LRK53_RS04865	0.81	-0.3
1,131,847	-		LRK53_RS04865	0.81	+1.0
1,131,847	-		LRK53_RS04865	0.81	+0.9
1,131,862	+		LRK53_RS04865	0.82	-0.6
1,131,903	+		LRK53_RS04865	0.84	-0.2
1,131,903	+		LRK53_RS04865	0.84	-1.0
1,131,903	+		LRK53_RS04865	0.84	-1.9
1,131,903	+		LRK53_RS04865	0.84	-2.0
1,131,903	+		LRK53_RS04865	0.84	+0.7
1,131,903	+		LRK53_RS04865	0.84	+0.7
1,131,903	+		LRK53_RS04865	0.84	-0.4
1,131,903	+		LRK53_RS04865	0.84	-2.2
1,131,903	+		LRK53_RS04865	0.84	-0.2
1,131,903	+		LRK53_RS04865	0.84	-1.5
1,131,903	+		LRK53_RS04865	0.84	-2.0
1,131,903	+		LRK53_RS04865	0.84	-1.1
1,131,903	+		LRK53_RS04865	0.84	+1.2
1,131,903	+		LRK53_RS04865	0.84	-1.5
1,131,903	+		LRK53_RS04865	0.84	-0.7
1,131,903	+		LRK53_RS04865	0.84	-2.3
1,131,904	-		LRK53_RS04865	0.84	-0.9
1,131,904	-		LRK53_RS04865	0.84	-1.0
1,131,904	-		LRK53_RS04865	0.84	-1.7
1,131,904	-		LRK53_RS04865	0.84	-0.7
1,131,904	-		LRK53_RS04865	0.84	+0.1
1,131,904	-		LRK53_RS04865	0.84	+0.0
1,131,904	-		LRK53_RS04865	0.84	-1.9
1,131,904	-		LRK53_RS04865	0.84	+0.3
1,131,904	-		LRK53_RS04865	0.84	-0.2
1,131,904	-		LRK53_RS04865	0.84	+0.3
1,131,904	-		LRK53_RS04865	0.84	-0.6
1,132,219	+				-0.5
1,132,219	+				-0.3
1,132,510	+				+1.3
1,132,511	-				-0.3
1,132,641	+		LRK53_RS04870	0.18	-0.1
1,132,641	+		LRK53_RS04870	0.18	-0.1
1,132,641	+		LRK53_RS04870	0.18	+0.3
1,132,642	-		LRK53_RS04870	0.18	-0.0
1,132,642	-		LRK53_RS04870	0.18	+0.3
1,132,642	-		LRK53_RS04870	0.18	-0.6
1,132,642	-		LRK53_RS04870	0.18	-2.7
1,132,642	-		LRK53_RS04870	0.18	-1.0
1,132,642	-		LRK53_RS04870	0.18	+0.3
1,132,642	-		LRK53_RS04870	0.18	-1.5
1,132,810	+		LRK53_RS04870	0.31	+0.3
1,132,810	+		LRK53_RS04870	0.31	-0.5
1,132,811	-		LRK53_RS04870	0.31	+0.4
1,132,811	-		LRK53_RS04870	0.31	+0.3
1,132,895	+		LRK53_RS04870	0.37	-1.8
1,132,895	+		LRK53_RS04870	0.37	-0.7
1,132,895	+		LRK53_RS04870	0.37	+0.8
1,132,895	+		LRK53_RS04870	0.37	-0.6
1,132,895	+		LRK53_RS04870	0.37	-0.7
1,132,895	+		LRK53_RS04870	0.37	+2.3
1,132,896	-		LRK53_RS04870	0.37	-0.3
1,132,896	-		LRK53_RS04870	0.37	+0.1
1,132,896	-		LRK53_RS04870	0.37	+0.7
1,132,896	-		LRK53_RS04870	0.37	-2.0
1,132,939	-		LRK53_RS04870	0.40	-1.2
1,132,951	+		LRK53_RS04870	0.41	-0.5
1,132,951	+		LRK53_RS04870	0.41	-0.4
1,132,952	-		LRK53_RS04870	0.41	-0.1
1,132,952	-		LRK53_RS04870	0.41	+0.5
1,132,952	-		LRK53_RS04870	0.41	+0.1
1,132,952	-		LRK53_RS04870	0.41	+1.3
1,132,952	-		LRK53_RS04870	0.41	-0.6
1,132,952	-		LRK53_RS04870	0.41	-1.0
1,132,952	-		LRK53_RS04870	0.41	+0.7
1,132,952	-		LRK53_RS04870	0.41	-0.6
1,132,952	-		LRK53_RS04870	0.41	+0.4
1,132,952	-		LRK53_RS04870	0.41	+0.5
1,132,954	+		LRK53_RS04870	0.41	-1.0
1,132,954	+		LRK53_RS04870	0.41	-0.5
1,132,954	+		LRK53_RS04870	0.41	-0.3
1,132,954	+		LRK53_RS04870	0.41	+1.3
1,132,954	+		LRK53_RS04870	0.41	+2.3
1,132,954	+		LRK53_RS04870	0.41	+1.9
1,132,954	+		LRK53_RS04870	0.41	-1.5
1,132,954	+		LRK53_RS04870	0.41	-0.3
1,132,954	+		LRK53_RS04870	0.41	-0.1
1,132,954	+		LRK53_RS04870	0.41	+0.0
1,132,954	+		LRK53_RS04870	0.41	+0.7
1,132,954	+		LRK53_RS04870	0.41	+1.0
1,132,954	+		LRK53_RS04870	0.41	-0.5
1,132,954	+		LRK53_RS04870	0.41	-0.1
1,132,955	-		LRK53_RS04870	0.41	-0.7
1,132,955	-		LRK53_RS04870	0.41	-0.6
1,132,955	-		LRK53_RS04870	0.41	+1.3
1,132,955	-		LRK53_RS04870	0.41	-2.5
1,132,955	-		LRK53_RS04870	0.41	-1.1
1,132,955	-		LRK53_RS04870	0.41	-1.0
1,132,955	-		LRK53_RS04870	0.41	+0.1
1,132,955	-		LRK53_RS04870	0.41	-0.0
1,132,955	-		LRK53_RS04870	0.41	-2.2
1,132,955	-		LRK53_RS04870	0.41	-2.1
1,132,955	-		LRK53_RS04870	0.41	-1.0
1,132,955	-		LRK53_RS04870	0.41	+0.4
1,132,955	-		LRK53_RS04870	0.41	-0.4
1,132,955	-		LRK53_RS04870	0.41	+0.7
1,132,955	-		LRK53_RS04870	0.41	-1.9
1,132,955	-		LRK53_RS04870	0.41	-0.3
1,132,955	-		LRK53_RS04870	0.41	+1.3
1,132,955	-		LRK53_RS04870	0.41	-0.7
1,133,272	+		LRK53_RS04870	0.64	+0.1
1,133,273	-		LRK53_RS04870	0.64	-3.6
1,133,273	-		LRK53_RS04870	0.64	-0.3
1,133,273	-		LRK53_RS04870	0.64	-0.0
1,133,273	-		LRK53_RS04870	0.64	-1.0
1,133,273	-		LRK53_RS04870	0.64	-0.2
1,133,273	-		LRK53_RS04870	0.64	-0.6
1,133,273	-		LRK53_RS04870	0.64	+3.3
1,133,332	+		LRK53_RS04870	0.68	-0.7
1,133,332	+		LRK53_RS04870	0.68	-0.9
1,133,332	+		LRK53_RS04870	0.68	+0.5
1,133,333	-		LRK53_RS04870	0.68	-0.2
1,133,383	+		LRK53_RS04870	0.72	-1.5
1,133,383	+		LRK53_RS04870	0.72	+0.2
1,133,383	+		LRK53_RS04870	0.72	+0.6
1,133,383	+		LRK53_RS04870	0.72	+0.2
1,133,384	-		LRK53_RS04870	0.72	+0.5
1,133,384	-		LRK53_RS04870	0.72	+0.6
1,133,384	-		LRK53_RS04870	0.72	+1.3
1,133,384	-		LRK53_RS04870	0.72	-0.4
1,133,384	-		LRK53_RS04870	0.72	+0.3
1,133,384	-		LRK53_RS04870	0.72	-0.7
1,133,384	-		LRK53_RS04870	0.72	-0.4
1,133,384	-		LRK53_RS04870	0.72	+0.1
1,133,384	-		LRK53_RS04870	0.72	-2.3
1,133,384	-		LRK53_RS04870	0.72	+0.3
1,133,384	-		LRK53_RS04870	0.72	-0.8
1,133,384	-		LRK53_RS04870	0.72	+0.3
1,133,559	+		LRK53_RS04870	0.84	-0.6
1,133,721	+				+0.5
1,133,721	+				-0.3
1,133,721	+				-1.7
1,133,722	-				-0.2
1,133,982	+		LRK53_RS04875	0.22	-1.0
1,133,982	+		LRK53_RS04875	0.22	-0.8
1,133,982	+		LRK53_RS04875	0.22	+0.9
1,133,983	-		LRK53_RS04875	0.22	-0.7
1,133,983	-		LRK53_RS04875	0.22	+1.3
1,134,034	+		LRK53_RS04875	0.27	+0.3
1,134,035	-		LRK53_RS04875	0.28	+0.3
1,134,049	+		LRK53_RS04875	0.29	-0.6
1,134,167	+		LRK53_RS04875	0.41	-0.3
1,134,167	+		LRK53_RS04875	0.41	-0.0
1,134,167	+		LRK53_RS04875	0.41	-0.3
1,134,167	+		LRK53_RS04875	0.41	-0.9
1,134,246	+		LRK53_RS04875	0.50	-0.5
1,134,246	+		LRK53_RS04875	0.50	-1.3
1,134,246	+		LRK53_RS04875	0.50	-1.1
1,134,246	+		LRK53_RS04875	0.50	-0.7
1,134,246	+		LRK53_RS04875	0.50	+1.3
1,134,246	+		LRK53_RS04875	0.50	+1.6
1,134,246	+		LRK53_RS04875	0.50	-0.6
1,134,246	+		LRK53_RS04875	0.50	+1.0
1,134,246	+		LRK53_RS04875	0.50	-0.7
1,134,246	+		LRK53_RS04875	0.50	+0.3
1,134,247	-		LRK53_RS04875	0.50	-0.6
1,134,247	-		LRK53_RS04875	0.50	-0.7
1,134,247	-		LRK53_RS04875	0.50	-0.3
1,134,247	-		LRK53_RS04875	0.50	+1.3
1,134,247	-		LRK53_RS04875	0.50	+0.8
1,134,247	-		LRK53_RS04875	0.50	-3.1
1,134,249	+		LRK53_RS04875	0.50	-0.3
1,134,249	+		LRK53_RS04875	0.50	-1.0
1,134,249	+		LRK53_RS04875	0.50	-0.7
1,134,249	+		LRK53_RS04875	0.50	-0.5
1,134,249	+		LRK53_RS04875	0.50	-0.0
1,134,249	+		LRK53_RS04875	0.50	-0.7
1,134,249	+		LRK53_RS04875	0.50	-1.0
1,134,249	+		LRK53_RS04875	0.50	-1.0
1,134,249	+		LRK53_RS04875	0.50	-1.5
1,134,249	+		LRK53_RS04875	0.50	-1.0
1,134,249	+		LRK53_RS04875	0.50	-0.7
1,134,249	+		LRK53_RS04875	0.50	+1.3
1,134,249	+		LRK53_RS04875	0.50	+1.3
1,134,249	+		LRK53_RS04875	0.50	-0.9
1,134,249	+		LRK53_RS04875	0.50	-1.0
1,134,249	+		LRK53_RS04875	0.50	-0.0
1,134,249	+		LRK53_RS04875	0.50	-1.0
1,134,249	+		LRK53_RS04875	0.50	-1.0
1,134,249	+		LRK53_RS04875	0.50	-0.1
1,134,249	+		LRK53_RS04875	0.50	+1.9
1,134,249	+		LRK53_RS04875	0.50	-2.5
1,134,250	-		LRK53_RS04875	0.50	-1.7
1,134,250	-		LRK53_RS04875	0.50	-2.3
1,134,250	-		LRK53_RS04875	0.50	+0.3
1,134,250	-		LRK53_RS04875	0.50	-0.3
1,134,250	-		LRK53_RS04875	0.50	-1.0
1,134,250	-		LRK53_RS04875	0.50	-0.1
1,134,250	-		LRK53_RS04875	0.50	-1.4
1,134,250	-		LRK53_RS04875	0.50	-0.5
1,134,250	-		LRK53_RS04875	0.50	+0.5
1,134,624	+		LRK53_RS04875	0.89	-0.5
1,134,625	-		LRK53_RS04875	0.89	+0.4
1,134,625	-		LRK53_RS04875	0.89	-1.3
1,134,625	-		LRK53_RS04875	0.89	-0.0
1,134,625	-		LRK53_RS04875	0.89	+0.1
1,134,754	+				+0.5