Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04320

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,002,555	+		LRK53_RS04315	0.54	+2.3
1,002,555	+		LRK53_RS04315	0.54	-0.4
1,002,555	+		LRK53_RS04315	0.54	+1.3
1,002,555	+		LRK53_RS04315	0.54	-0.1
1,002,555	+		LRK53_RS04315	0.54	+0.7
1,002,555	+		LRK53_RS04315	0.54	-2.6
1,002,555	+		LRK53_RS04315	0.54	-1.0
1,002,555	+		LRK53_RS04315	0.54	+1.3
1,002,555	+		LRK53_RS04315	0.54	-0.5
1,002,555	+		LRK53_RS04315	0.54	-0.7
1,002,555	+		LRK53_RS04315	0.54	-1.4
1,002,556	-		LRK53_RS04315	0.55	-2.3
1,002,556	-		LRK53_RS04315	0.55	+0.3
1,002,556	-		LRK53_RS04315	0.55	+0.3
1,002,556	-		LRK53_RS04315	0.55	+0.3
1,002,556	-		LRK53_RS04315	0.55	+0.0
1,002,663	+		LRK53_RS04315	0.62	+1.9
1,002,726	+		LRK53_RS04315	0.67	+0.4
1,002,726	+		LRK53_RS04315	0.67	-0.1
1,002,726	+		LRK53_RS04315	0.67	-0.0
1,002,726	+		LRK53_RS04315	0.67	-0.9
1,002,726	+		LRK53_RS04315	0.67	-1.4
1,002,726	+		LRK53_RS04315	0.67	-0.1
1,002,726	+		LRK53_RS04315	0.67	-0.5
1,002,726	+		LRK53_RS04315	0.67	+1.3
1,002,726	+		LRK53_RS04315	0.67	-0.8
1,002,726	+		LRK53_RS04315	0.67	-1.0
1,002,726	+		LRK53_RS04315	0.67	-3.5
1,002,726	+		LRK53_RS04315	0.67	+1.3
1,002,726	+		LRK53_RS04315	0.67	+0.0
1,002,726	+		LRK53_RS04315	0.67	-0.8
1,002,726	+		LRK53_RS04315	0.67	-0.4
1,002,726	+		LRK53_RS04315	0.67	-1.2
1,002,726	+		LRK53_RS04315	0.67	-0.1
1,002,726	+		LRK53_RS04315	0.67	-1.2
1,002,726	+		LRK53_RS04315	0.67	-0.1
1,002,726	+		LRK53_RS04315	0.67	-3.0
1,002,726	+		LRK53_RS04315	0.67	+0.3
1,002,726	+		LRK53_RS04315	0.67	-0.7
1,002,726	+		LRK53_RS04315	0.67	+0.7
1,002,726	+		LRK53_RS04315	0.67	-2.4
1,002,726	+		LRK53_RS04315	0.67	-0.5
1,002,726	+		LRK53_RS04315	0.67	-1.1
1,002,726	+		LRK53_RS04315	0.67	+2.3
1,002,726	+		LRK53_RS04315	0.67	-1.1
1,002,726	+		LRK53_RS04315	0.67	+2.3
1,002,726	+		LRK53_RS04315	0.67	-1.5
1,002,727	-		LRK53_RS04315	0.67	+0.6
1,002,727	-		LRK53_RS04315	0.67	+0.1
1,002,727	-		LRK53_RS04315	0.67	-0.7
1,002,727	-		LRK53_RS04315	0.67	+0.3
1,002,727	-		LRK53_RS04315	0.67	-0.2
1,002,727	-		LRK53_RS04315	0.67	-1.3
1,002,727	-		LRK53_RS04315	0.67	+2.1
1,002,727	-		LRK53_RS04315	0.67	-1.2
1,002,727	-		LRK53_RS04315	0.67	-1.1
1,002,727	-		LRK53_RS04315	0.67	-0.1
1,002,727	-		LRK53_RS04315	0.67	-0.2
1,002,727	-		LRK53_RS04315	0.67	-1.1
1,002,727	-		LRK53_RS04315	0.67	-0.7
1,002,727	-		LRK53_RS04315	0.67	-2.1
1,002,727	-		LRK53_RS04315	0.67	+1.3
1,002,727	-		LRK53_RS04315	0.67	-0.1
1,002,727	-		LRK53_RS04315	0.67	-1.3
1,002,727	-		LRK53_RS04315	0.67	+1.3
1,002,727	-		LRK53_RS04315	0.67	-1.1
1,002,727	-		LRK53_RS04315	0.67	-0.3
1,002,727	-		LRK53_RS04315	0.67	+2.6
1,002,727	-		LRK53_RS04315	0.67	-1.3
1,002,741	+		LRK53_RS04315	0.68	+0.6
1,002,741	+		LRK53_RS04315	0.68	+0.3
1,002,741	+		LRK53_RS04315	0.68	-1.0
1,002,741	+		LRK53_RS04315	0.68	-1.3
1,002,741	+		LRK53_RS04315	0.68	+1.3
1,002,741	+		LRK53_RS04315	0.68	-0.3
1,002,741	+		LRK53_RS04315	0.68	-0.1
1,002,741	+		LRK53_RS04315	0.68	-0.8
1,002,741	+		LRK53_RS04315	0.68	-2.3
1,002,741	+		LRK53_RS04315	0.68	+0.3
1,002,741	+		LRK53_RS04315	0.68	-0.9
1,002,741	+		LRK53_RS04315	0.68	-0.4
1,002,741	+		LRK53_RS04315	0.68	-0.1
1,002,741	+		LRK53_RS04315	0.68	+1.3
1,002,741	+		LRK53_RS04315	0.68	+0.4
1,002,741	+		LRK53_RS04315	0.68	-0.3
1,002,741	+		LRK53_RS04315	0.68	-1.1
1,002,742	-		LRK53_RS04315	0.68	+1.3
1,002,742	-		LRK53_RS04315	0.68	+1.9
1,002,742	-		LRK53_RS04315	0.68	-1.5
1,002,742	-		LRK53_RS04315	0.68	-0.6
1,002,742	-		LRK53_RS04315	0.68	+2.3
1,002,742	-		LRK53_RS04315	0.68	-1.3
1,002,742	-		LRK53_RS04315	0.68	+0.7
1,002,742	-		LRK53_RS04315	0.68	-1.8
1,002,742	-		LRK53_RS04315	0.68	-0.9
1,002,742	-		LRK53_RS04315	0.68	-0.6
1,002,742	-		LRK53_RS04315	0.68	-0.3
1,002,742	-		LRK53_RS04315	0.68	-1.3
1,002,742	-		LRK53_RS04315	0.68	+0.3
1,002,742	-		LRK53_RS04315	0.68	+0.0
1,002,742	-		LRK53_RS04315	0.68	+0.1
1,002,742	-		LRK53_RS04315	0.68	-1.3
1,002,742	-		LRK53_RS04315	0.68	+0.3
1,002,750	+		LRK53_RS04315	0.69	-0.1
1,002,750	+		LRK53_RS04315	0.69	-0.3
1,002,751	-		LRK53_RS04315	0.69	-1.7
1,002,751	-		LRK53_RS04315	0.69	-1.7
1,002,751	-		LRK53_RS04315	0.69	-1.6
1,002,751	-		LRK53_RS04315	0.69	-1.9
1,002,751	-		LRK53_RS04315	0.69	-0.3
1,002,751	-		LRK53_RS04315	0.69	-0.1
1,002,876	+		LRK53_RS04315	0.78	-0.7
1,002,876	+		LRK53_RS04315	0.78	+0.3
1,002,876	+		LRK53_RS04315	0.78	-0.5
1,002,876	+		LRK53_RS04315	0.78	-2.2
1,002,876	+		LRK53_RS04315	0.78	-0.6
1,002,876	+		LRK53_RS04315	0.78	-0.1
1,002,876	+		LRK53_RS04315	0.78	-1.3
1,002,876	+		LRK53_RS04315	0.78	-1.5
1,002,877	-		LRK53_RS04315	0.78	-0.5
1,002,877	-		LRK53_RS04315	0.78	-1.5
1,002,877	-		LRK53_RS04315	0.78	-1.3
1,002,877	-		LRK53_RS04315	0.78	-1.0
1,002,877	-		LRK53_RS04315	0.78	-0.7
1,002,877	-		LRK53_RS04315	0.78	-0.3
1,002,877	-		LRK53_RS04315	0.78	-0.1
1,002,894	+		LRK53_RS04315	0.79	-0.8
1,002,894	+		LRK53_RS04315	0.79	+0.0
1,002,894	+		LRK53_RS04315	0.79	-0.3
1,002,894	+		LRK53_RS04315	0.79	+0.9
1,002,894	+		LRK53_RS04315	0.79	+1.3
1,002,894	+		LRK53_RS04315	0.79	+0.3
1,002,894	+		LRK53_RS04315	0.79	+0.3
1,002,894	+		LRK53_RS04315	0.79	-1.4
1,002,894	+		LRK53_RS04315	0.79	-0.6
1,002,894	+		LRK53_RS04315	0.79	+1.3
1,002,894	+		LRK53_RS04315	0.79	-0.5
1,002,894	+		LRK53_RS04315	0.79	+0.4
1,002,894	+		LRK53_RS04315	0.79	+0.4
1,002,895	-		LRK53_RS04315	0.79	-1.5
1,002,895	-		LRK53_RS04315	0.79	-0.4
1,002,895	-		LRK53_RS04315	0.79	-0.7
1,002,895	-		LRK53_RS04315	0.79	-0.3
1,002,895	-		LRK53_RS04315	0.79	+1.3
1,002,895	-		LRK53_RS04315	0.79	-1.5
1,002,895	-		LRK53_RS04315	0.79	+1.1
1,002,895	-		LRK53_RS04315	0.79	-0.4
1,003,070	-				+1.3
1,003,184	-				-0.3
1,003,227	+				-0.1
1,003,228	-				-1.3
1,003,246	+				+0.9
1,003,246	+				+0.3
1,003,246	+				-0.9
1,003,246	+				-0.3
1,003,246	+				+0.3
1,003,246	+				-0.7
1,003,246	+				-1.9
1,003,246	+				-0.3
1,003,246	+				-0.1
1,003,246	+				+1.3
1,003,246	+				+1.3
1,003,246	+				-0.6
1,003,246	+				+1.3
1,003,246	+				-0.3
1,003,246	+				-1.2
1,003,246	+				+0.1
1,003,246	+				-1.3
1,003,246	+				-2.2
1,003,246	+				-0.9
1,003,246	+				-0.3
1,003,246	+				-1.4
1,003,246	+				-0.6
1,003,246	+				-0.7
1,003,246	+				-0.3
1,003,246	+				-0.7
1,003,246	+				-1.3
1,003,246	+				-0.2
1,003,246	+				+0.5
1,003,246	+				+1.3
1,003,246	+				+0.3
1,003,246	+				-0.7
1,003,246	+				-1.3
1,003,246	+				-1.0
1,003,246	+				-0.4
1,003,246	+				-2.4
1,003,246	+				+0.8
1,003,246	+				-0.7
1,003,246	+				-1.2
1,003,246	+				-0.2
1,003,246	+				+0.3
1,003,246	+				+0.3
1,003,246	+				+0.4
1,003,246	+				-1.5
1,003,246	+				+0.3
1,003,246	+				+1.3
1,003,246	+				-0.4
1,003,246	+				-0.6
1,003,246	+				-1.3
1,003,246	+				-0.5
1,003,246	+				-1.0
1,003,246	+				+1.3
1,003,246	+				+0.3
1,003,246	+				+0.8
1,003,246	+				-0.8
1,003,246	+				+0.8
1,003,246	+				-0.7
1,003,246	+				-0.5
1,003,246	+				-0.9
1,003,246	+				-1.5
1,003,246	+				-3.1
1,003,247	-				-1.9
1,003,247	-				-0.5
1,003,247	-				+0.3
1,003,247	-				-0.3
1,003,247	-				-0.7
1,003,247	-				-1.3
1,003,247	-				+0.3
1,003,247	-				+0.3
1,003,247	-				-0.7
1,003,247	-				-1.6
1,003,247	-				-0.3
1,003,247	-				-0.7
1,003,247	-				-0.7
1,003,247	-				+2.0
1,003,247	-				+1.3
1,003,247	-				+0.9
1,003,247	-				-1.7
1,003,247	-				-0.5
1,003,247	-				-1.5
1,003,247	-				-0.7
1,003,247	-				-0.1
1,003,250	+				-0.0
1,003,250	+				-1.3
1,003,250	+				-0.8
1,003,250	+				-1.5
1,003,250	+				-0.6
1,003,250	+				+0.6
1,003,250	+				-0.5
1,003,251	-				-0.6
1,003,251	-				+0.9
1,003,251	-				+0.7
1,003,251	-				+0.7
1,003,251	-				+0.3
1,003,257	+				-1.3
1,003,258	-				+1.3
1,003,258	-				+2.9
1,003,258	-				+0.0
1,003,258	-				-0.2
1,003,258	-				+0.5
1,003,282	+				+0.2
1,003,300	+				+0.5
1,003,300	+				-0.3
1,003,300	+				-0.3
1,003,300	+				-0.8
1,003,300	+				-1.1
1,003,300	+				-0.8
1,003,300	+				+1.3
1,003,301	-				-0.7
1,003,301	-				+1.3
1,003,301	-				-0.6
1,003,301	-				-1.1
1,003,308	+				-2.4
1,003,336	+				-1.3
1,003,336	+				+1.3
1,003,336	+				+0.5
1,003,336	+				+1.9
1,003,336	+				-1.2
1,003,336	+				-1.7
1,003,337	-				+0.3
1,003,369	+				+1.3
1,003,369	+				+0.1
1,003,369	+				-0.7
1,003,369	+				-0.5
1,003,369	+				+0.3
1,003,369	+				-0.6
1,003,369	+				+0.6
1,003,369	+				-1.1
1,003,369	+				-0.0
1,003,369	+				-0.1
1,003,369	+				-0.7
1,003,369	+				-1.0
1,003,369	+				-0.2
1,003,370	-				-0.7
1,003,370	-				+0.3
1,003,370	-				-1.3
1,003,370	-				-1.1
1,003,370	-				+0.3
1,003,370	-				+0.3
1,003,370	-				-1.1
1,003,370	-				-0.3
1,003,370	-				+1.2
1,003,370	-				+1.3
1,003,370	-				-0.1
1,003,370	-				-0.6
1,003,370	-				+0.3
1,003,370	-				+0.3
1,003,391	+				+0.7
1,003,391	+				+0.5
1,003,391	+				-2.1
1,003,391	+				-0.3
1,003,391	+				+0.3
1,003,391	+				-1.3
1,003,391	+				+2.3
1,003,391	+				-0.3
1,003,391	+				-0.7
1,003,391	+				+0.5
1,003,391	+				-0.7
1,003,391	+				-1.2
1,003,391	+				-0.4
1,003,391	+				+0.3
1,003,391	+				+0.2
1,003,391	+				-0.7
1,003,391	+				-1.6
1,003,392	-				+0.4
1,003,392	-				-0.7
1,003,392	-				-1.5
1,003,392	-				+2.3
1,003,392	-				-0.3
1,003,392	-				-1.2
1,003,392	-				+1.7
1,003,412	+				-1.0
1,003,412	+				-0.3
1,003,412	+				+0.7
1,003,563	+				+1.9
1,003,563	+				-0.3
1,003,650	+				-1.3
1,003,650	+				+1.0
1,003,650	+				+2.3
1,003,651	-				+0.7
1,003,651	-				+1.3
1,003,651	-				+2.3
1,003,651	-				-0.3
1,003,692	-		LRK53_RS04320	0.12	+2.3
1,003,788	+		LRK53_RS04320	0.17	-0.5
1,003,788	+		LRK53_RS04320	0.17	+0.3
1,003,788	+		LRK53_RS04320	0.17	+0.5
1,003,788	+		LRK53_RS04320	0.17	-1.0
1,003,788	+		LRK53_RS04320	0.17	+0.3
1,003,788	+		LRK53_RS04320	0.17	+0.5
1,003,788	+		LRK53_RS04320	0.17	-0.3
1,003,788	+		LRK53_RS04320	0.17	+0.8
1,003,788	+		LRK53_RS04320	0.17	+1.3
1,003,788	+		LRK53_RS04320	0.17	-0.3
1,003,788	+		LRK53_RS04320	0.17	-0.7
1,003,788	+		LRK53_RS04320	0.17	-0.3
1,003,788	+		LRK53_RS04320	0.17	-1.1
1,003,789	-		LRK53_RS04320	0.17	-0.7
1,003,789	-		LRK53_RS04320	0.17	-0.1
1,003,789	-		LRK53_RS04320	0.17	+0.3
1,003,789	-		LRK53_RS04320	0.17	-0.5
1,003,789	-		LRK53_RS04320	0.17	-1.1
1,003,789	-		LRK53_RS04320	0.17	-0.1
1,003,789	-		LRK53_RS04320	0.17	-0.7
1,003,789	-		LRK53_RS04320	0.17	+0.3
1,003,789	-		LRK53_RS04320	0.17	+1.3
1,003,789	-		LRK53_RS04320	0.17	+0.7
1,003,957	+		LRK53_RS04320	0.26	-0.3
1,003,958	-		LRK53_RS04320	0.26	-1.7
1,003,958	-		LRK53_RS04320	0.26	+1.0
1,004,221	-		LRK53_RS04320	0.41	+0.3
1,004,229	+		LRK53_RS04320	0.41	-0.3
1,004,229	+		LRK53_RS04320	0.41	-1.2
1,004,229	+		LRK53_RS04320	0.41	-1.2
1,004,229	+		LRK53_RS04320	0.41	-1.3
1,004,229	+		LRK53_RS04320	0.41	-0.5
1,004,229	+		LRK53_RS04320	0.41	+0.3
1,004,229	+		LRK53_RS04320	0.41	+1.3
1,004,229	+		LRK53_RS04320	0.41	-1.7
1,004,230	-		LRK53_RS04320	0.41	+0.3
1,004,230	-		LRK53_RS04320	0.41	-0.3
1,004,230	-		LRK53_RS04320	0.41	+0.3
1,004,230	-		LRK53_RS04320	0.41	+1.9
1,004,230	-		LRK53_RS04320	0.41	+0.8
1,004,230	-		LRK53_RS04320	0.41	-0.9
1,004,230	-		LRK53_RS04320	0.41	+1.3
1,004,388	+		LRK53_RS04320	0.50	-1.9
1,004,388	+		LRK53_RS04320	0.50	-1.3
1,004,388	+		LRK53_RS04320	0.50	+0.9
1,004,388	+		LRK53_RS04320	0.50	-1.3
1,004,412	+		LRK53_RS04320	0.51	-0.3
1,004,412	+		LRK53_RS04320	0.51	-2.4
1,004,413	-		LRK53_RS04320	0.51	+0.6
1,004,413	-		LRK53_RS04320	0.51	-2.2
1,004,413	-		LRK53_RS04320	0.51	+1.3
1,004,427	+		LRK53_RS04320	0.52	-1.1
1,004,427	+		LRK53_RS04320	0.52	+0.3
1,004,427	+		LRK53_RS04320	0.52	-0.8
1,004,427	+		LRK53_RS04320	0.52	+1.3
1,004,466	+		LRK53_RS04320	0.54	-0.5
1,004,513	+		LRK53_RS04320	0.57	-1.9
1,004,514	-		LRK53_RS04320	0.57	+1.3
1,004,514	-		LRK53_RS04320	0.57	-0.3
1,004,905	-		LRK53_RS04320	0.78	+0.3
1,004,949	+		LRK53_RS04320	0.80	+0.3
1,004,949	+		LRK53_RS04320	0.80	+0.3
1,004,949	+		LRK53_RS04320	0.80	+0.0
1,004,949	+		LRK53_RS04320	0.80	-0.5
1,004,949	+		LRK53_RS04320	0.80	-0.9
1,004,949	+		LRK53_RS04320	0.80	-0.7
1,004,949	+		LRK53_RS04320	0.80	+0.5
1,004,949	+		LRK53_RS04320	0.80	-1.7
1,004,949	+		LRK53_RS04320	0.80	-1.6
1,004,949	+		LRK53_RS04320	0.80	+1.3
1,004,949	+		LRK53_RS04320	0.80	+2.6
1,004,950	-		LRK53_RS04320	0.80	+0.3
1,004,950	-		LRK53_RS04320	0.80	+2.9
1,004,950	-		LRK53_RS04320	0.80	+1.3
1,004,950	-		LRK53_RS04320	0.80	-2.3
1,004,950	-		LRK53_RS04320	0.80	+0.9
1,004,950	-		LRK53_RS04320	0.80	-1.3
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1,005,235	-				-0.4
1,005,235	-				+0.7
1,005,347	+				-0.5
1,005,347	+				-0.3
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1,005,347	+				+0.3
1,005,347	+				-2.1
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1,005,347	+				-1.5
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1,005,348	-				-0.2
1,005,348	-				+0.3
1,005,348	-				-1.1
1,005,348	-				+0.3
1,005,348	-				-0.8
1,005,348	-				+0.5
1,005,348	-				+1.3
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1,005,348	-				+0.5
1,005,348	-				-0.9
1,005,348	-				-0.3
1,005,348	-				-0.6
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1,005,348	-				+2.3
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1,005,367	+				-0.5
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1,005,367	+				-1.5
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1,005,367	+				+2.0
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1,005,367	+				-1.9
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1,005,367	+				-1.1
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1,005,590	-				+0.5
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1,005,609	+				-2.2
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1,005,691	+		LRK53_RS04325	0.28	+1.1
1,005,691	+		LRK53_RS04325	0.28	-1.3
1,005,691	+		LRK53_RS04325	0.28	-0.7
1,005,691	+		LRK53_RS04325	0.28	-0.3
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