Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17760

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,899,193	-		LRK53_RS17755	0.38	+0.5
3,899,193	-		LRK53_RS17755	0.38	-0.3
3,899,193	-		LRK53_RS17755	0.38	+0.0
3,899,252	+		LRK53_RS17755	0.42	+0.2
3,899,297	+		LRK53_RS17755	0.46	-1.6
3,899,297	+		LRK53_RS17755	0.46	+1.8
3,899,297	+		LRK53_RS17755	0.46	-1.0
3,899,297	+		LRK53_RS17755	0.46	-0.6
3,899,297	+		LRK53_RS17755	0.46	-1.0
3,899,297	+		LRK53_RS17755	0.46	+0.7
3,899,297	+		LRK53_RS17755	0.46	+0.5
3,899,297	+		LRK53_RS17755	0.46	-2.1
3,899,297	+		LRK53_RS17755	0.46	-1.2
3,899,297	+		LRK53_RS17755	0.46	-0.0
3,899,298	-		LRK53_RS17755	0.46	+0.7
3,899,298	-		LRK53_RS17755	0.46	+1.6
3,899,298	-		LRK53_RS17755	0.46	+0.4
3,899,298	-		LRK53_RS17755	0.46	-0.3
3,899,298	-		LRK53_RS17755	0.46	+0.4
3,899,354	+		LRK53_RS17755	0.50	+1.4
3,899,354	+		LRK53_RS17755	0.50	+0.0
3,899,354	+		LRK53_RS17755	0.50	+0.8
3,899,354	+		LRK53_RS17755	0.50	-0.4
3,899,355	-		LRK53_RS17755	0.50	-1.1
3,899,381	+		LRK53_RS17755	0.52	-0.5
3,899,381	+		LRK53_RS17755	0.52	-1.0
3,899,381	+		LRK53_RS17755	0.52	-0.6
3,899,381	+		LRK53_RS17755	0.52	+0.9
3,899,382	-		LRK53_RS17755	0.52	+0.4
3,899,382	-		LRK53_RS17755	0.52	-0.1
3,899,382	-		LRK53_RS17755	0.52	-0.9
3,899,382	-		LRK53_RS17755	0.52	-0.8
3,899,382	-		LRK53_RS17755	0.52	+0.3
3,899,382	-		LRK53_RS17755	0.52	+2.4
3,899,382	-		LRK53_RS17755	0.52	+1.4
3,899,384	+		LRK53_RS17755	0.52	+1.4
3,899,567	+		LRK53_RS17755	0.66	-0.6
3,899,567	+		LRK53_RS17755	0.66	-0.1
3,899,568	-		LRK53_RS17755	0.66	+1.2
3,899,568	-		LRK53_RS17755	0.66	-0.2
3,899,568	-		LRK53_RS17755	0.66	-1.8
3,899,568	-		LRK53_RS17755	0.66	+0.5
3,899,568	-		LRK53_RS17755	0.66	+1.1
3,899,568	-		LRK53_RS17755	0.66	-0.6
3,899,568	-		LRK53_RS17755	0.66	-0.8
3,899,576	+		LRK53_RS17755	0.67	-2.6
3,899,641	+		LRK53_RS17755	0.72	-1.7
3,899,641	+		LRK53_RS17755	0.72	-1.2
3,899,641	+		LRK53_RS17755	0.72	+1.2
3,899,641	+		LRK53_RS17755	0.72	-0.5
3,899,641	+		LRK53_RS17755	0.72	+0.2
3,899,642	-		LRK53_RS17755	0.72	-0.3
3,899,642	-		LRK53_RS17755	0.72	-1.0
3,899,642	-		LRK53_RS17755	0.72	-0.2
3,899,642	-		LRK53_RS17755	0.72	-0.0
3,899,655	+		LRK53_RS17755	0.73	+0.9
3,899,655	+		LRK53_RS17755	0.73	+1.4
3,899,656	-		LRK53_RS17755	0.73	+0.4
3,899,685	+		LRK53_RS17755	0.75	-0.1
3,899,685	+		LRK53_RS17755	0.75	-2.0
3,899,685	+		LRK53_RS17755	0.75	-0.1
3,899,685	+		LRK53_RS17755	0.75	-1.0
3,899,686	-		LRK53_RS17755	0.75	+0.1
3,899,686	-		LRK53_RS17755	0.75	-0.6
3,899,796	+		LRK53_RS17755	0.83	-0.3
3,899,796	+		LRK53_RS17755	0.83	-0.9
3,899,797	-		LRK53_RS17755	0.83	+1.4
3,899,797	-		LRK53_RS17755	0.83	+1.7
3,899,852	+		LRK53_RS17755	0.88	+0.1
3,899,852	+		LRK53_RS17755	0.88	+1.4
3,899,852	+		LRK53_RS17755	0.88	-1.8
3,899,852	+		LRK53_RS17755	0.88	-0.8
3,899,852	+		LRK53_RS17755	0.88	-0.5
3,899,852	+		LRK53_RS17755	0.88	-0.4
3,899,852	+		LRK53_RS17755	0.88	+0.0
3,899,852	+		LRK53_RS17755	0.88	+1.4
3,899,852	+		LRK53_RS17755	0.88	-0.2
3,899,852	+		LRK53_RS17755	0.88	-1.9
3,899,852	+		LRK53_RS17755	0.88	-0.6
3,899,852	+		LRK53_RS17755	0.88	-0.1
3,899,852	+		LRK53_RS17755	0.88	-0.5
3,899,852	+		LRK53_RS17755	0.88	-0.6
3,899,852	+		LRK53_RS17755	0.88	+1.4
3,899,852	+		LRK53_RS17755	0.88	+0.1
3,899,852	+		LRK53_RS17755	0.88	-0.3
3,899,852	+		LRK53_RS17755	0.88	+0.0
3,899,853	-		LRK53_RS17755	0.88	+0.9
3,899,853	-		LRK53_RS17755	0.88	-0.6
3,899,853	-		LRK53_RS17755	0.88	-1.4
3,899,853	-		LRK53_RS17755	0.88	+0.4
3,899,853	-		LRK53_RS17755	0.88	-0.9
3,899,853	-		LRK53_RS17755	0.88	+0.7
3,899,853	-		LRK53_RS17755	0.88	-1.5
3,899,853	-		LRK53_RS17755	0.88	+2.4
3,899,853	-		LRK53_RS17755	0.88	-0.2
3,899,853	-		LRK53_RS17755	0.88	+1.4
3,899,853	-		LRK53_RS17755	0.88	-0.1
3,899,853	-		LRK53_RS17755	0.88	+0.0
3,899,997	+				+1.1
3,899,997	+				+0.4
3,899,997	+				+0.4
3,899,997	+				+0.6
3,899,997	+				-0.9
3,899,997	+				+0.4
3,899,998	-				+0.2
3,899,998	-				+0.6
3,899,998	-				-2.5
3,899,998	-				-0.6
3,899,998	-				-0.5
3,899,998	-				-0.7
3,899,998	-				+0.5
3,899,998	-				+1.4
3,899,998	-				-0.1
3,899,998	-				+0.4
3,899,998	-				-2.1
3,899,998	-				-2.0
3,899,998	-				-1.5
3,899,998	-				-2.0
3,899,998	-				+1.9
3,899,998	-				-0.2
3,899,998	-				-0.4
3,899,998	-				-0.6
3,899,998	-				-0.1
3,899,998	-				+0.4
3,900,128	+				+0.5
3,900,128	+				-0.1
3,900,128	+				-0.1
3,900,128	+				+1.9
3,900,128	+				-1.2
3,900,128	+				+0.6
3,900,128	+				+1.7
3,900,129	-				-0.1
3,900,129	-				+0.6
3,900,129	-				-0.0
3,900,129	-				-2.4
3,900,129	-				-1.0
3,900,191	-				-0.4
3,900,598	+		LRK53_RS17760	0.21	-1.4
3,900,598	+		LRK53_RS17760	0.21	-1.1
3,900,598	+		LRK53_RS17760	0.21	-1.4
3,900,599	-		LRK53_RS17760	0.21	-0.2
3,900,599	-		LRK53_RS17760	0.21	-0.6
3,900,599	-		LRK53_RS17760	0.21	-0.2
3,900,599	-		LRK53_RS17760	0.21	-1.0
3,900,667	+		LRK53_RS17760	0.24	+1.4
3,900,668	-		LRK53_RS17760	0.24	+1.9
3,900,668	-		LRK53_RS17760	0.24	-0.4
3,900,668	-		LRK53_RS17760	0.24	+0.0
3,900,668	-		LRK53_RS17760	0.24	+2.1
3,900,668	-		LRK53_RS17760	0.24	-1.1
3,900,668	-		LRK53_RS17760	0.24	-0.1
3,900,901	+		LRK53_RS17760	0.35	-0.2
3,900,901	+		LRK53_RS17760	0.35	+0.0
3,900,902	-		LRK53_RS17760	0.35	-1.0
3,900,902	-		LRK53_RS17760	0.35	+1.1
3,900,902	-		LRK53_RS17760	0.35	+0.9
3,900,902	-		LRK53_RS17760	0.35	-0.4
3,900,902	-		LRK53_RS17760	0.35	-1.4
3,900,902	-		LRK53_RS17760	0.35	-1.2
3,900,902	-		LRK53_RS17760	0.35	+0.9
3,901,079	+		LRK53_RS17760	0.43	-0.5
3,901,079	+		LRK53_RS17760	0.43	-1.0
3,901,080	-		LRK53_RS17760	0.43	+0.4
3,901,080	-		LRK53_RS17760	0.43	-0.6
3,901,080	-		LRK53_RS17760	0.43	-1.6
3,901,080	-		LRK53_RS17760	0.43	+0.0
3,901,234	+		LRK53_RS17760	0.50	-1.8
3,901,579	+		LRK53_RS17760	0.65	-0.6
3,901,580	-		LRK53_RS17760	0.65	-0.8
3,901,580	-		LRK53_RS17760	0.65	-0.6
3,901,580	-		LRK53_RS17760	0.65	+1.4
3,901,580	-		LRK53_RS17760	0.65	+1.4
3,901,669	+		LRK53_RS17760	0.69	-1.5
3,901,670	-		LRK53_RS17760	0.69	-1.0
3,901,759	+		LRK53_RS17760	0.73	-1.0
3,901,759	+		LRK53_RS17760	0.73	-1.4
3,901,759	+		LRK53_RS17760	0.73	-1.0
3,901,759	+		LRK53_RS17760	0.73	-2.5
3,901,759	+		LRK53_RS17760	0.73	-0.1
3,901,759	+		LRK53_RS17760	0.73	+1.4
3,901,759	+		LRK53_RS17760	0.73	+0.4
3,901,759	+		LRK53_RS17760	0.73	-1.8
3,901,760	-		LRK53_RS17760	0.73	-1.4
3,901,760	-		LRK53_RS17760	0.73	-0.6
3,901,760	-		LRK53_RS17760	0.73	-0.3
3,901,760	-		LRK53_RS17760	0.73	+0.4
3,901,760	-		LRK53_RS17760	0.73	+0.0
3,901,760	-		LRK53_RS17760	0.73	+0.8
3,901,760	-		LRK53_RS17760	0.73	-1.2
3,901,760	-		LRK53_RS17760	0.73	+0.4
3,901,768	+		LRK53_RS17760	0.73	+0.6
3,901,769	-		LRK53_RS17760	0.73	-1.4
3,901,915	+		LRK53_RS17760	0.80	-0.8
3,901,915	+		LRK53_RS17760	0.80	-1.2
3,901,915	+		LRK53_RS17760	0.80	-1.0
3,901,915	+		LRK53_RS17760	0.80	-1.2
3,901,915	+		LRK53_RS17760	0.80	+0.2
3,901,915	+		LRK53_RS17760	0.80	-1.0
3,901,915	+		LRK53_RS17760	0.80	+0.4
3,901,915	+		LRK53_RS17760	0.80	-2.1
3,901,915	+		LRK53_RS17760	0.80	+1.9
3,901,915	+		LRK53_RS17760	0.80	-1.1
3,901,915	+		LRK53_RS17760	0.80	-1.4
3,901,915	+		LRK53_RS17760	0.80	-1.2
3,901,915	+		LRK53_RS17760	0.80	+1.4
3,901,915	+		LRK53_RS17760	0.80	+1.4
3,901,915	+		LRK53_RS17760	0.80	-0.2
3,901,916	-		LRK53_RS17760	0.80	+1.4
3,901,916	-		LRK53_RS17760	0.80	-1.4
3,901,916	-		LRK53_RS17760	0.80	+0.6
3,901,916	-		LRK53_RS17760	0.80	-1.4
3,901,916	-		LRK53_RS17760	0.80	+1.4
3,901,916	-		LRK53_RS17760	0.80	+1.9
3,901,916	-		LRK53_RS17760	0.80	+0.4
3,901,916	-		LRK53_RS17760	0.80	+0.9
3,901,916	-		LRK53_RS17760	0.80	-0.2
3,901,966	+		LRK53_RS17760	0.82	+2.4
3,901,966	+		LRK53_RS17760	0.82	+0.4
3,901,967	-		LRK53_RS17760	0.82	-0.0
3,901,967	-		LRK53_RS17760	0.82	-0.6
3,901,967	-		LRK53_RS17760	0.82	-1.0
3,901,967	-		LRK53_RS17760	0.82	+2.4
3,901,967	-		LRK53_RS17760	0.82	-1.0
3,901,996	+		LRK53_RS17760	0.84	-0.3
3,901,996	+		LRK53_RS17760	0.84	-1.0
3,901,997	-		LRK53_RS17760	0.84	+0.9
3,901,997	-		LRK53_RS17760	0.84	+1.4
3,901,997	-		LRK53_RS17760	0.84	-0.4
3,901,997	-		LRK53_RS17760	0.84	-2.1
3,902,131	+		LRK53_RS17760	0.90	-0.2
3,902,131	+		LRK53_RS17760	0.90	+1.4
3,902,131	+		LRK53_RS17760	0.90	-0.6
3,902,131	+		LRK53_RS17760	0.90	-0.2
3,902,131	+		LRK53_RS17760	0.90	+1.2
3,902,131	+		LRK53_RS17760	0.90	-0.6
3,902,132	-		LRK53_RS17760	0.90	-2.0
3,902,132	-		LRK53_RS17760	0.90	-0.6
3,902,132	-		LRK53_RS17760	0.90	-1.4
3,902,132	-		LRK53_RS17760	0.90	-0.6
3,902,132	-		LRK53_RS17760	0.90	-1.0
3,902,132	-		LRK53_RS17760	0.90	-0.8
3,902,140	+				-1.6
3,902,140	+				+1.4
3,902,140	+				-1.0
3,902,140	+				-1.0
3,902,140	+				+0.0
3,902,140	+				-0.2
3,902,140	+				-0.2
3,902,141	-				-0.2
3,902,141	-				+0.4
3,902,141	-				+0.5
3,902,141	-				-0.2
3,902,141	-				+0.4
3,902,141	-				-1.8
3,902,141	-				-1.4
3,902,258	+				+1.9
3,902,259	-				+0.8
3,902,259	-				-0.2
3,902,421	+				-0.4
3,902,422	-				+2.4
3,902,422	-				-1.2
3,902,514	+		LRK53_RS17765	0.14	-1.6
3,902,514	+		LRK53_RS17765	0.14	+0.4
3,902,554	-		LRK53_RS17765	0.18	-1.0
3,902,554	-		LRK53_RS17765	0.18	-0.9
3,902,591	+		LRK53_RS17765	0.22	+0.4
3,902,591	+		LRK53_RS17765	0.22	+1.4
3,902,592	-		LRK53_RS17765	0.22	-0.6
3,902,592	-		LRK53_RS17765	0.22	-1.4
3,902,592	-		LRK53_RS17765	0.22	+0.4
3,902,592	-		LRK53_RS17765	0.22	-2.4
3,902,716	-		LRK53_RS17765	0.34	-1.0
3,902,716	-		LRK53_RS17765	0.34	-0.9
3,902,743	-		LRK53_RS17765	0.37	+2.9
3,902,965	-		LRK53_RS17765	0.59	+2.9
3,902,965	-		LRK53_RS17765	0.59	-1.4
3,902,965	-		LRK53_RS17765	0.59	-1.3
3,902,965	-		LRK53_RS17765	0.59	+0.3
3,902,965	-		LRK53_RS17765	0.59	-2.2
3,902,965	-		LRK53_RS17765	0.59	+0.4
3,902,965	-		LRK53_RS17765	0.59	-1.4