Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17740

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,890,277	+		LRK53_RS17735	0.63	-0.9
3,890,277	+		LRK53_RS17735	0.63	+0.0
3,890,277	+		LRK53_RS17735	0.63	+1.8
3,890,277	+		LRK53_RS17735	0.63	-0.8
3,890,278	-		LRK53_RS17735	0.63	-1.1
3,890,278	-		LRK53_RS17735	0.63	+0.4
3,890,278	-		LRK53_RS17735	0.63	-0.8
3,890,278	-		LRK53_RS17735	0.63	-0.2
3,890,561	+		LRK53_RS17735	0.84	+0.2
3,890,562	-		LRK53_RS17735	0.84	-0.8
3,890,624	+		LRK53_RS17735	0.88	-0.5
3,890,624	+		LRK53_RS17735	0.88	+0.1
3,890,625	-		LRK53_RS17735	0.88	+1.2
3,890,625	-		LRK53_RS17735	0.88	-2.3
3,890,625	-		LRK53_RS17735	0.88	-1.3
3,890,675	+				-0.6
3,890,675	+				+0.6
3,890,675	+				-1.4
3,890,675	+				+1.2
3,890,675	+				+0.9
3,890,675	+				+0.7
3,890,675	+				-0.6
3,890,675	+				-1.4
3,890,675	+				+0.5
3,890,676	-				-1.1
3,890,676	-				+0.0
3,890,676	-				-1.4
3,890,676	-				-0.4
3,890,676	-				-0.4
3,890,676	-				-0.6
3,890,676	-				-1.3
3,890,676	-				-1.4
3,890,676	-				+0.0
3,890,676	-				+0.9
3,890,676	-				+0.1
3,890,676	-				+0.8
3,890,676	-				-0.2
3,890,765	+				-0.4
3,890,847	+				+0.2
3,890,889	+				+0.3
3,890,889	+				+0.2
3,890,890	-				+0.2
3,890,890	-				-0.3
3,891,055	+		LRK53_RS17740	0.11	-0.9
3,891,055	+		LRK53_RS17740	0.11	-0.6
3,891,056	-		LRK53_RS17740	0.12	+0.2
3,891,443	+		LRK53_RS17740	0.34	+0.2
3,891,443	+		LRK53_RS17740	0.34	-2.1
3,891,443	+		LRK53_RS17740	0.34	+0.4
3,891,443	+		LRK53_RS17740	0.34	-2.8
3,891,443	+		LRK53_RS17740	0.34	+1.2
3,891,443	+		LRK53_RS17740	0.34	-2.7
3,891,443	+		LRK53_RS17740	0.34	-0.6
3,891,443	+		LRK53_RS17740	0.34	-0.8
3,891,443	+		LRK53_RS17740	0.34	-1.6
3,891,443	+		LRK53_RS17740	0.34	-0.5
3,891,443	+		LRK53_RS17740	0.34	-0.0
3,891,443	+		LRK53_RS17740	0.34	-0.8
3,891,443	+		LRK53_RS17740	0.34	-0.8
3,891,443	+		LRK53_RS17740	0.34	-0.2
3,891,443	+		LRK53_RS17740	0.34	-0.6
3,891,443	+		LRK53_RS17740	0.34	-1.1
3,891,443	+		LRK53_RS17740	0.34	-2.5
3,891,443	+		LRK53_RS17740	0.34	-0.9
3,891,444	-		LRK53_RS17740	0.34	-0.1
3,891,444	-		LRK53_RS17740	0.34	+1.2
3,891,444	-		LRK53_RS17740	0.34	+1.2
3,891,444	-		LRK53_RS17740	0.34	+3.2
3,891,444	-		LRK53_RS17740	0.34	+1.2
3,891,444	-		LRK53_RS17740	0.34	-0.4
3,891,444	-		LRK53_RS17740	0.34	-0.8
3,891,444	-		LRK53_RS17740	0.34	+1.2
3,891,444	-		LRK53_RS17740	0.34	-1.1
3,891,444	-		LRK53_RS17740	0.34	+0.2
3,891,520	+		LRK53_RS17740	0.38	+0.4
3,891,520	+		LRK53_RS17740	0.38	-1.3
3,891,520	+		LRK53_RS17740	0.38	+0.9
3,891,520	+		LRK53_RS17740	0.38	-1.6
3,891,520	+		LRK53_RS17740	0.38	-0.8
3,891,520	+		LRK53_RS17740	0.38	+1.2
3,891,520	+		LRK53_RS17740	0.38	-1.9
3,891,520	+		LRK53_RS17740	0.38	+1.2
3,891,520	+		LRK53_RS17740	0.38	+0.1
3,891,520	+		LRK53_RS17740	0.38	-2.4
3,891,520	+		LRK53_RS17740	0.38	-0.6
3,891,520	+		LRK53_RS17740	0.38	+0.6
3,891,520	+		LRK53_RS17740	0.38	+0.1
3,891,520	+		LRK53_RS17740	0.38	-0.8
3,891,520	+		LRK53_RS17740	0.38	+1.5
3,891,520	+		LRK53_RS17740	0.38	+0.6
3,891,520	+		LRK53_RS17740	0.38	-0.8
3,891,520	+		LRK53_RS17740	0.38	-0.2
3,891,520	+		LRK53_RS17740	0.38	-0.7
3,891,520	+		LRK53_RS17740	0.38	+0.2
3,891,520	+		LRK53_RS17740	0.38	-1.0
3,891,520	+		LRK53_RS17740	0.38	+0.0
3,891,520	+		LRK53_RS17740	0.38	+0.0
3,891,520	+		LRK53_RS17740	0.38	+1.6
3,891,520	+		LRK53_RS17740	0.38	-0.6
3,891,520	+		LRK53_RS17740	0.38	-0.1
3,891,520	+		LRK53_RS17740	0.38	-2.1
3,891,520	+		LRK53_RS17740	0.38	-0.5
3,891,521	-		LRK53_RS17740	0.38	+0.8
3,891,521	-		LRK53_RS17740	0.38	+0.5
3,891,521	-		LRK53_RS17740	0.38	-1.6
3,891,521	-		LRK53_RS17740	0.38	+0.2
3,891,521	-		LRK53_RS17740	0.38	-0.2
3,891,521	-		LRK53_RS17740	0.38	-1.8
3,891,521	-		LRK53_RS17740	0.38	-0.5
3,891,521	-		LRK53_RS17740	0.38	-0.4
3,891,521	-		LRK53_RS17740	0.38	-1.4
3,891,521	-		LRK53_RS17740	0.38	-0.6
3,891,521	-		LRK53_RS17740	0.38	-0.2
3,891,521	-		LRK53_RS17740	0.38	+0.2
3,891,521	-		LRK53_RS17740	0.38	+0.8
3,891,521	-		LRK53_RS17740	0.38	-1.3
3,891,521	-		LRK53_RS17740	0.38	+0.7
3,891,521	-		LRK53_RS17740	0.38	+1.6
3,891,521	-		LRK53_RS17740	0.38	-0.5
3,891,521	-		LRK53_RS17740	0.38	+0.8
3,891,521	-		LRK53_RS17740	0.38	+0.2
3,891,521	-		LRK53_RS17740	0.38	+1.2
3,891,521	-		LRK53_RS17740	0.38	-0.7
3,891,521	-		LRK53_RS17740	0.38	-0.3
3,891,521	-		LRK53_RS17740	0.38	+1.2
3,891,521	-		LRK53_RS17740	0.38	-1.0
3,891,521	-		LRK53_RS17740	0.38	-0.8
3,891,521	-		LRK53_RS17740	0.38	-0.6
3,891,521	-		LRK53_RS17740	0.38	-1.3
3,891,524	+		LRK53_RS17740	0.38	+0.4
3,891,524	+		LRK53_RS17740	0.38	+0.5
3,891,524	+		LRK53_RS17740	0.38	-0.4
3,891,524	+		LRK53_RS17740	0.38	-0.8
3,891,524	+		LRK53_RS17740	0.38	-0.3
3,891,524	+		LRK53_RS17740	0.38	+1.2
3,891,524	+		LRK53_RS17740	0.38	-0.0
3,891,524	+		LRK53_RS17740	0.38	-0.2
3,891,524	+		LRK53_RS17740	0.38	-0.8
3,891,524	+		LRK53_RS17740	0.38	-0.1
3,891,524	+		LRK53_RS17740	0.38	+0.2
3,891,524	+		LRK53_RS17740	0.38	-1.1
3,891,524	+		LRK53_RS17740	0.38	-0.2
3,891,524	+		LRK53_RS17740	0.38	-0.3
3,891,524	+		LRK53_RS17740	0.38	-1.8
3,891,524	+		LRK53_RS17740	0.38	+0.2
3,891,524	+		LRK53_RS17740	0.38	+1.2
3,891,524	+		LRK53_RS17740	0.38	+0.6
3,891,524	+		LRK53_RS17740	0.38	+0.8
3,891,524	+		LRK53_RS17740	0.38	-0.6
3,891,524	+		LRK53_RS17740	0.38	-1.0
3,891,524	+		LRK53_RS17740	0.38	-1.8
3,891,524	+		LRK53_RS17740	0.38	-0.8
3,891,524	+		LRK53_RS17740	0.38	-1.1
3,891,524	+		LRK53_RS17740	0.38	-0.2
3,891,524	+		LRK53_RS17740	0.38	-2.1
3,891,524	+		LRK53_RS17740	0.38	-1.8
3,891,524	+		LRK53_RS17740	0.38	+0.4
3,891,524	+		LRK53_RS17740	0.38	+0.5
3,891,525	-		LRK53_RS17740	0.38	-1.0
3,891,525	-		LRK53_RS17740	0.38	-2.3
3,891,525	-		LRK53_RS17740	0.38	-0.4
3,891,525	-		LRK53_RS17740	0.38	-0.4
3,891,525	-		LRK53_RS17740	0.38	-0.4
3,891,525	-		LRK53_RS17740	0.38	-0.3
3,891,525	-		LRK53_RS17740	0.38	+0.2
3,891,525	-		LRK53_RS17740	0.38	+0.1
3,891,525	-		LRK53_RS17740	0.38	-0.2
3,891,525	-		LRK53_RS17740	0.38	+1.2
3,891,525	-		LRK53_RS17740	0.38	-0.8
3,891,525	-		LRK53_RS17740	0.38	-2.7
3,891,525	-		LRK53_RS17740	0.38	-0.6
3,891,525	-		LRK53_RS17740	0.38	-0.4
3,891,525	-		LRK53_RS17740	0.38	+0.9
3,891,525	-		LRK53_RS17740	0.38	+0.8
3,891,525	-		LRK53_RS17740	0.38	-0.9
3,891,554	+		LRK53_RS17740	0.40	-0.8
3,891,554	+		LRK53_RS17740	0.40	+0.6
3,891,554	+		LRK53_RS17740	0.40	+1.5
3,891,554	+		LRK53_RS17740	0.40	+0.6
3,891,555	-		LRK53_RS17740	0.40	+0.0
3,891,555	-		LRK53_RS17740	0.40	+0.6
3,891,555	-		LRK53_RS17740	0.40	+1.2
3,891,555	-		LRK53_RS17740	0.40	-1.1
3,891,602	+		LRK53_RS17740	0.43	-1.3
3,891,602	+		LRK53_RS17740	0.43	+1.2
3,891,602	+		LRK53_RS17740	0.43	+0.7
3,891,603	-		LRK53_RS17740	0.43	+0.5
3,891,603	-		LRK53_RS17740	0.43	+0.2
3,891,603	-		LRK53_RS17740	0.43	-0.1
3,891,603	-		LRK53_RS17740	0.43	+1.2
3,891,603	-		LRK53_RS17740	0.43	+0.0
3,891,603	-		LRK53_RS17740	0.43	+0.4
3,891,645	-		LRK53_RS17740	0.45	-1.9
3,891,645	-		LRK53_RS17740	0.45	+0.2
3,891,645	-		LRK53_RS17740	0.45	-0.4
3,891,645	-		LRK53_RS17740	0.45	-0.4
3,891,697	+		LRK53_RS17740	0.48	+1.2
3,891,697	+		LRK53_RS17740	0.48	-0.1
3,891,697	+		LRK53_RS17740	0.48	-0.2
3,891,697	+		LRK53_RS17740	0.48	-0.5
3,891,697	+		LRK53_RS17740	0.48	+0.2
3,891,697	+		LRK53_RS17740	0.48	+1.6
3,891,697	+		LRK53_RS17740	0.48	-1.1
3,891,697	+		LRK53_RS17740	0.48	-1.4
3,891,697	+		LRK53_RS17740	0.48	-0.0
3,891,698	-		LRK53_RS17740	0.48	-1.8
3,891,698	-		LRK53_RS17740	0.48	+1.2
3,891,698	-		LRK53_RS17740	0.48	-0.8
3,891,698	-		LRK53_RS17740	0.48	-1.8
3,891,698	-		LRK53_RS17740	0.48	-0.8
3,891,698	-		LRK53_RS17740	0.48	-0.5
3,891,698	-		LRK53_RS17740	0.48	+1.2
3,891,698	-		LRK53_RS17740	0.48	+0.8
3,891,698	-		LRK53_RS17740	0.48	+1.8
3,891,698	-		LRK53_RS17740	0.48	-0.4
3,891,698	-		LRK53_RS17740	0.48	-1.3
3,891,698	-		LRK53_RS17740	0.48	+2.2
3,891,698	-		LRK53_RS17740	0.48	+2.2
3,891,805	+		LRK53_RS17740	0.54	+0.2
3,891,806	-		LRK53_RS17740	0.54	+0.6
3,891,818	-		LRK53_RS17740	0.55	+0.8
3,891,839	-		LRK53_RS17740	0.56	-0.8
3,891,940	+		LRK53_RS17740	0.62	-0.3
3,891,940	+		LRK53_RS17740	0.62	+2.2
3,891,940	+		LRK53_RS17740	0.62	+0.2
3,891,940	+		LRK53_RS17740	0.62	+1.2
3,891,940	+		LRK53_RS17740	0.62	+0.6
3,891,940	+		LRK53_RS17740	0.62	-0.8
3,891,940	+		LRK53_RS17740	0.62	+1.1
3,891,940	+		LRK53_RS17740	0.62	+2.2
3,891,940	+		LRK53_RS17740	0.62	+2.2
3,891,940	+		LRK53_RS17740	0.62	+2.2
3,891,940	+		LRK53_RS17740	0.62	-1.5
3,891,940	+		LRK53_RS17740	0.62	-1.0
3,891,940	+		LRK53_RS17740	0.62	-1.4
3,891,940	+		LRK53_RS17740	0.62	+1.9
3,891,940	+		LRK53_RS17740	0.62	-0.2
3,891,940	+		LRK53_RS17740	0.62	+0.6
3,891,941	-		LRK53_RS17740	0.62	+1.6
3,891,941	-		LRK53_RS17740	0.62	-2.1
3,891,941	-		LRK53_RS17740	0.62	+2.2
3,891,941	-		LRK53_RS17740	0.62	+1.5
3,891,941	-		LRK53_RS17740	0.62	-1.2
3,891,941	-		LRK53_RS17740	0.62	-2.0
3,891,941	-		LRK53_RS17740	0.62	-0.4
3,891,941	-		LRK53_RS17740	0.62	+0.3
3,891,941	-		LRK53_RS17740	0.62	+0.2
3,891,941	-		LRK53_RS17740	0.62	-0.8
3,891,941	-		LRK53_RS17740	0.62	+0.3
3,891,956	-		LRK53_RS17740	0.63	+1.5
3,891,956	-		LRK53_RS17740	0.63	+0.8
3,891,956	-		LRK53_RS17740	0.63	+2.2
3,891,964	+		LRK53_RS17740	0.64	-0.4
3,891,964	+		LRK53_RS17740	0.64	+1.2
3,891,964	+		LRK53_RS17740	0.64	-1.6
3,891,965	-		LRK53_RS17740	0.64	-2.3
3,891,985	+		LRK53_RS17740	0.65	+0.2
3,891,985	+		LRK53_RS17740	0.65	-0.6
3,891,985	+		LRK53_RS17740	0.65	+0.3
3,891,985	+		LRK53_RS17740	0.65	+0.2
3,891,985	+		LRK53_RS17740	0.65	-0.3
3,891,985	+		LRK53_RS17740	0.65	+1.2
3,891,986	-		LRK53_RS17740	0.65	-0.6
3,891,986	-		LRK53_RS17740	0.65	+1.2
3,891,986	-		LRK53_RS17740	0.65	+1.0
3,891,986	-		LRK53_RS17740	0.65	+0.1
3,891,986	-		LRK53_RS17740	0.65	+1.2
3,892,073	-		LRK53_RS17740	0.70	+1.2
3,892,073	-		LRK53_RS17740	0.70	+0.2
3,892,105	+		LRK53_RS17740	0.72	-1.1
3,892,105	+		LRK53_RS17740	0.72	+1.2
3,892,105	+		LRK53_RS17740	0.72	+0.1
3,892,105	+		LRK53_RS17740	0.72	+3.2
3,892,105	+		LRK53_RS17740	0.72	-0.0
3,892,105	+		LRK53_RS17740	0.72	-0.2
3,892,105	+		LRK53_RS17740	0.72	-0.4
3,892,105	+		LRK53_RS17740	0.72	-0.8
3,892,105	+		LRK53_RS17740	0.72	-2.2
3,892,106	-		LRK53_RS17740	0.72	+0.2
3,892,106	-		LRK53_RS17740	0.72	+1.2
3,892,106	-		LRK53_RS17740	0.72	+0.2
3,892,106	-		LRK53_RS17740	0.72	-1.6
3,892,189	+		LRK53_RS17740	0.76	+0.8
3,892,189	+		LRK53_RS17740	0.76	-0.1
3,892,190	-		LRK53_RS17740	0.77	+0.2
3,892,190	-		LRK53_RS17740	0.77	+2.4
3,892,190	-		LRK53_RS17740	0.77	+2.8
3,892,190	-		LRK53_RS17740	0.77	-2.1
3,892,249	+		LRK53_RS17740	0.80	-0.5
3,892,250	-		LRK53_RS17740	0.80	+0.8
3,892,306	+		LRK53_RS17740	0.83	-0.1
3,892,306	+		LRK53_RS17740	0.83	-1.7
3,892,307	-		LRK53_RS17740	0.83	+0.4
3,892,307	-		LRK53_RS17740	0.83	-1.1
3,892,514	+				+0.5
3,892,515	-				-0.8
3,892,515	-				-0.8
3,892,515	-				-0.1
3,892,684	+				+2.0
3,892,684	+				-0.0
3,892,718	+				+1.2
3,892,718	+				-0.4
3,892,718	+				-0.2
3,892,719	-				-0.4
3,892,719	-				+0.2
3,892,719	-				-1.3
3,892,719	-				-0.5
3,892,719	-				-0.8
3,892,762	+				+0.1
3,892,762	+				+0.8
3,892,762	+				-0.8
3,892,762	+				-0.5
3,892,762	+				-1.8
3,892,762	+				-0.4
3,892,763	-				-0.6
3,892,763	-				-0.8
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