Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17605

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,860,654	+				-2.6
3,860,655	-				+1.1
3,860,655	-				+0.7
3,860,705	+		LRK53_RS17600	0.10	+2.1
3,860,804	+		LRK53_RS17600	0.29	-0.1
3,860,805	-		LRK53_RS17600	0.29	+0.9
3,860,837	+		LRK53_RS17600	0.36	-0.6
3,860,837	+		LRK53_RS17600	0.36	-0.3
3,860,837	+		LRK53_RS17600	0.36	+0.0
3,860,837	+		LRK53_RS17600	0.36	+0.4
3,860,837	+		LRK53_RS17600	0.36	-0.2
3,860,837	+		LRK53_RS17600	0.36	+0.7
3,860,838	-		LRK53_RS17600	0.36	+1.6
3,860,838	-		LRK53_RS17600	0.36	-2.5
3,860,838	-		LRK53_RS17600	0.36	+0.4
3,860,838	-		LRK53_RS17600	0.36	-0.8
3,860,838	-		LRK53_RS17600	0.36	-0.4
3,860,838	-		LRK53_RS17600	0.36	-0.3
3,860,891	+		LRK53_RS17600	0.46	+1.0
3,860,892	-		LRK53_RS17600	0.46	-0.8
3,860,892	-		LRK53_RS17600	0.46	-0.4
3,860,892	-		LRK53_RS17600	0.46	-2.1
3,860,975	+		LRK53_RS17600	0.62	+0.0
3,860,975	+		LRK53_RS17600	0.62	-0.8
3,860,975	+		LRK53_RS17600	0.62	+0.4
3,860,975	+		LRK53_RS17600	0.62	+1.6
3,860,975	+		LRK53_RS17600	0.62	+0.1
3,860,976	-		LRK53_RS17600	0.63	+2.6
3,860,976	-		LRK53_RS17600	0.63	-0.8
3,860,976	-		LRK53_RS17600	0.63	+1.4
3,860,976	-		LRK53_RS17600	0.63	-1.2
3,860,996	+		LRK53_RS17600	0.66	-0.6
3,861,066	-		LRK53_RS17600	0.80	+0.4
3,861,066	-		LRK53_RS17600	0.80	-0.1
3,861,066	-		LRK53_RS17600	0.80	-0.2
3,861,066	-		LRK53_RS17600	0.80	-0.4
3,861,066	-		LRK53_RS17600	0.80	-2.2
3,861,240	+				+0.4
3,861,240	+				+0.2
3,861,240	+				+0.4
3,861,240	+				+1.4
3,861,240	+				+0.8
3,861,241	-				+1.1
3,861,241	-				+0.3
3,861,241	-				+1.4
3,861,241	-				-0.6
3,861,241	-				-0.0
3,861,241	-				+0.0
3,861,242	+				+1.4
3,861,242	+				+1.1
3,861,242	+				-1.1
3,861,242	+				-0.2
3,861,242	+				-2.0
3,861,242	+				+1.7
3,861,242	+				-2.1
3,861,242	+				+0.4
3,861,242	+				-0.6
3,861,242	+				+0.6
3,861,242	+				-0.0
3,861,242	+				-0.2
3,861,242	+				-1.2
3,861,242	+				-0.2
3,861,242	+				-0.2
3,861,242	+				+0.1
3,861,242	+				-1.1
3,861,242	+				+0.4
3,861,243	-				-0.4
3,861,243	-				+1.4
3,861,243	-				-0.2
3,861,243	-				-0.8
3,861,243	-				+0.1
3,861,243	-				-0.6
3,861,243	-				+0.4
3,861,243	-				-2.4
3,861,243	-				+1.2
3,861,243	-				-0.2
3,861,243	-				+0.4
3,861,243	-				+0.5
3,861,243	-				-0.4
3,861,243	-				+0.4
3,861,243	-				-0.5
3,861,243	-				+1.4
3,861,367	+				-1.1
3,861,367	+				+0.4
3,861,367	+				-0.4
3,861,367	+				-0.1
3,861,367	+				+0.0
3,861,368	-				+1.1
3,861,368	-				+1.5
3,861,368	-				+0.9
3,861,529	+		LRK53_RS17605	0.26	-0.6
3,861,529	+		LRK53_RS17605	0.26	+0.4
3,861,529	+		LRK53_RS17605	0.26	+0.4
3,861,530	-		LRK53_RS17605	0.27	-0.8
3,861,530	-		LRK53_RS17605	0.27	-1.4
3,861,530	-		LRK53_RS17605	0.27	+0.8
3,861,530	-		LRK53_RS17605	0.27	-1.2
3,861,530	-		LRK53_RS17605	0.27	-1.8
3,861,632	-		LRK53_RS17605	0.43	-0.6
3,861,632	-		LRK53_RS17605	0.43	+0.4
3,861,959	+				-0.6
3,861,959	+				+0.4
3,861,959	+				-0.2
3,861,959	+				+1.2
3,861,959	+				-0.5
3,861,960	-				-0.6
3,861,960	-				-1.0
3,861,992	-				+0.1
3,862,052	+				-2.1
3,862,052	+				-1.8
3,862,052	+				-0.6
3,862,052	+				+2.0
3,862,053	-				-0.3
3,862,053	-				+1.0
3,862,053	-				-0.6
3,862,053	-				-0.3
3,862,086	+				-0.2
3,862,086	+				-0.2
3,862,086	+				-2.1
3,862,086	+				+0.4
3,862,087	-				-1.6
3,862,087	-				-0.7
3,862,291	-		LRK53_RS17610	0.31	-2.0
3,862,347	+		LRK53_RS17610	0.47	-2.2
3,862,347	+		LRK53_RS17610	0.47	+0.3
3,862,347	+		LRK53_RS17610	0.47	+1.2
3,862,347	+		LRK53_RS17610	0.47	-1.0
3,862,347	+		LRK53_RS17610	0.47	-0.6
3,862,347	+		LRK53_RS17610	0.47	-2.1
3,862,347	+		LRK53_RS17610	0.47	+0.2
3,862,347	+		LRK53_RS17610	0.47	+0.9
3,862,347	+		LRK53_RS17610	0.47	+0.7
3,862,348	-		LRK53_RS17610	0.48	-0.8
3,862,348	-		LRK53_RS17610	0.48	+0.5
3,862,348	-		LRK53_RS17610	0.48	-0.6
3,862,348	-		LRK53_RS17610	0.48	+2.4
3,862,348	-		LRK53_RS17610	0.48	+0.4
3,862,348	-		LRK53_RS17610	0.48	-0.2
3,862,348	-		LRK53_RS17610	0.48	-0.5
3,862,407	+		LRK53_RS17610	0.64	-0.1
3,862,407	+		LRK53_RS17610	0.64	+1.9
3,862,407	+		LRK53_RS17610	0.64	+1.4
3,862,407	+		LRK53_RS17610	0.64	-0.2
3,862,407	+		LRK53_RS17610	0.64	+0.8
3,862,407	+		LRK53_RS17610	0.64	+0.4
3,862,407	+		LRK53_RS17610	0.64	-0.7
3,862,407	+		LRK53_RS17610	0.64	-0.5
3,862,407	+		LRK53_RS17610	0.64	+0.6
3,862,408	-		LRK53_RS17610	0.65	-0.3
3,862,408	-		LRK53_RS17610	0.65	+0.5
3,862,408	-		LRK53_RS17610	0.65	-0.6
3,862,408	-		LRK53_RS17610	0.65	-0.2
3,862,408	-		LRK53_RS17610	0.65	+0.8
3,862,408	-		LRK53_RS17610	0.65	+0.1
3,862,408	-		LRK53_RS17610	0.65	+0.7
3,862,408	-		LRK53_RS17610	0.65	-1.3
3,862,408	-		LRK53_RS17610	0.65	+1.0
3,862,408	-		LRK53_RS17610	0.65	-0.1
3,862,408	-		LRK53_RS17610	0.65	+0.2
3,862,555	+				+0.6
3,862,555	+				+0.6
3,862,555	+				-0.2
3,862,556	-				-2.9
3,862,567	+				+1.1
3,862,567	+				-0.2
3,862,568	-				+0.5
3,862,568	-				-0.6
3,862,568	-				-1.8
3,862,568	-				-0.3
3,862,568	-				-0.3
3,862,568	-				+0.3
3,862,568	-				+0.4
3,862,568	-				+0.9
3,862,568	-				+2.0
3,862,572	+				+0.4
3,862,572	+				-0.6
3,862,572	+				-1.0
3,862,573	-				+0.4
3,862,573	-				-0.5
3,862,573	-				-2.2
3,862,573	-				-0.1
3,862,573	-				-0.4
3,862,573	-				+0.4
3,862,574	+				+0.1
3,862,574	+				+0.2
3,862,574	+				-1.1
3,862,574	+				-0.2
3,862,574	+				-1.2
3,862,575	-				-0.6
3,862,575	-				+0.7
3,862,575	-				-1.4
3,862,575	-				-0.7
3,862,575	-				-0.0
3,862,575	-				-0.5
3,862,575	-				-0.6
3,862,575	-				-2.1
3,862,575	-				-0.9
3,862,575	-				-0.2
3,862,575	-				+0.7
3,862,575	-				-0.6
3,862,630	+				-0.6
3,862,630	+				-0.6
3,862,630	+				+0.9
3,862,630	+				-1.1
3,862,631	-				+3.7
3,862,703	+				+1.4
3,862,703	+				+0.4
3,862,704	-				-0.6
3,862,710	-				-0.1
3,862,799	+				-0.9
3,862,799	+				-0.4
3,862,799	+				+0.7
3,862,799	+				-1.1
3,862,799	+				-0.8
3,862,800	-				+1.4
3,862,800	-				+0.4