Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17205

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,780,989	+		LRK53_RS17200	0.37	-0.6
3,780,989	+		LRK53_RS17200	0.37	-2.3
3,780,989	+		LRK53_RS17200	0.37	-1.3
3,780,989	+		LRK53_RS17200	0.37	-0.1
3,780,989	+		LRK53_RS17200	0.37	+1.4
3,780,989	+		LRK53_RS17200	0.37	-1.2
3,780,989	+		LRK53_RS17200	0.37	+0.7
3,780,989	+		LRK53_RS17200	0.37	-0.2
3,780,989	+		LRK53_RS17200	0.37	+0.4
3,780,990	-		LRK53_RS17200	0.37	-1.2
3,780,990	-		LRK53_RS17200	0.37	-0.1
3,780,990	-		LRK53_RS17200	0.37	+0.7
3,780,990	-		LRK53_RS17200	0.37	-2.2
3,780,990	-		LRK53_RS17200	0.37	-2.5
3,780,996	-		LRK53_RS17200	0.38	-0.8
3,780,996	-		LRK53_RS17200	0.38	+0.4
3,780,996	-		LRK53_RS17200	0.38	+0.1
3,781,115	+		LRK53_RS17200	0.46	-0.5
3,781,116	-		LRK53_RS17200	0.46	+1.4
3,781,116	-		LRK53_RS17200	0.46	-1.0
3,781,121	+		LRK53_RS17200	0.47	-0.8
3,781,121	+		LRK53_RS17200	0.47	+0.8
3,781,121	+		LRK53_RS17200	0.47	-1.2
3,781,121	+		LRK53_RS17200	0.47	-0.6
3,781,121	+		LRK53_RS17200	0.47	-0.3
3,781,121	+		LRK53_RS17200	0.47	-1.0
3,781,121	+		LRK53_RS17200	0.47	+0.4
3,781,121	+		LRK53_RS17200	0.47	-0.2
3,781,121	+		LRK53_RS17200	0.47	+2.0
3,781,122	-		LRK53_RS17200	0.47	+0.4
3,781,122	-		LRK53_RS17200	0.47	+0.3
3,781,122	-		LRK53_RS17200	0.47	-1.0
3,781,122	-		LRK53_RS17200	0.47	-1.0
3,781,122	-		LRK53_RS17200	0.47	-0.9
3,781,122	-		LRK53_RS17200	0.47	+1.0
3,781,122	-		LRK53_RS17200	0.47	+0.3
3,781,122	-		LRK53_RS17200	0.47	+0.5
3,781,122	-		LRK53_RS17200	0.47	-0.4
3,781,122	-		LRK53_RS17200	0.47	+0.4
3,781,122	-		LRK53_RS17200	0.47	-0.2
3,781,122	-		LRK53_RS17200	0.47	-0.8
3,781,205	+		LRK53_RS17200	0.53	-1.4
3,781,205	+		LRK53_RS17200	0.53	-1.2
3,781,205	+		LRK53_RS17200	0.53	+1.8
3,781,206	-		LRK53_RS17200	0.53	-0.4
3,781,206	-		LRK53_RS17200	0.53	+0.2
3,781,206	-		LRK53_RS17200	0.53	+1.0
3,781,206	-		LRK53_RS17200	0.53	+0.4
3,781,206	-		LRK53_RS17200	0.53	-0.5
3,781,206	-		LRK53_RS17200	0.53	+1.0
3,781,206	-		LRK53_RS17200	0.53	+1.4
3,781,376	+		LRK53_RS17200	0.65	+1.6
3,781,376	+		LRK53_RS17200	0.65	-0.8
3,781,376	+		LRK53_RS17200	0.65	-0.4
3,781,376	+		LRK53_RS17200	0.65	-1.0
3,781,376	+		LRK53_RS17200	0.65	-0.1
3,781,376	+		LRK53_RS17200	0.65	-0.9
3,781,376	+		LRK53_RS17200	0.65	-1.2
3,781,377	-		LRK53_RS17200	0.65	-0.5
3,781,377	-		LRK53_RS17200	0.65	-1.2
3,781,377	-		LRK53_RS17200	0.65	+0.2
3,781,377	-		LRK53_RS17200	0.65	+0.6
3,781,377	-		LRK53_RS17200	0.65	-0.1
3,781,377	-		LRK53_RS17200	0.65	+1.1
3,781,377	-		LRK53_RS17200	0.65	-0.2
3,781,377	-		LRK53_RS17200	0.65	+2.0
3,781,377	-		LRK53_RS17200	0.65	+3.0
3,781,377	-		LRK53_RS17200	0.65	-0.0
3,781,415	+		LRK53_RS17200	0.68	+1.4
3,781,415	+		LRK53_RS17200	0.68	-0.2
3,781,415	+		LRK53_RS17200	0.68	-0.2
3,781,415	+		LRK53_RS17200	0.68	-0.2
3,781,415	+		LRK53_RS17200	0.68	-2.0
3,781,416	-		LRK53_RS17200	0.68	-1.2
3,781,416	-		LRK53_RS17200	0.68	-0.6
3,781,416	-		LRK53_RS17200	0.68	-1.6
3,781,580	+		LRK53_RS17200	0.80	+1.4
3,781,612	+		LRK53_RS17200	0.82	-1.0
3,781,612	+		LRK53_RS17200	0.82	+1.1
3,781,613	-		LRK53_RS17200	0.82	+0.0
3,781,613	-		LRK53_RS17200	0.82	-2.6
3,781,613	-		LRK53_RS17200	0.82	+0.3
3,781,613	-		LRK53_RS17200	0.82	-0.7
3,781,613	-		LRK53_RS17200	0.82	-0.5
3,781,613	-		LRK53_RS17200	0.82	-0.5
3,781,613	-		LRK53_RS17200	0.82	-1.1
3,781,646	+		LRK53_RS17200	0.84	-0.2
3,781,646	+		LRK53_RS17200	0.84	-0.5
3,781,646	+		LRK53_RS17200	0.84	+0.8
3,781,646	+		LRK53_RS17200	0.84	-1.8
3,781,646	+		LRK53_RS17200	0.84	+0.5
3,781,647	-		LRK53_RS17200	0.84	-1.6
3,781,647	-		LRK53_RS17200	0.84	+1.0
3,781,647	-		LRK53_RS17200	0.84	+1.0
3,781,647	-		LRK53_RS17200	0.84	+0.9
3,781,647	-		LRK53_RS17200	0.84	+0.1
3,781,647	-		LRK53_RS17200	0.84	-0.5
3,781,647	-		LRK53_RS17200	0.84	-1.8
3,781,647	-		LRK53_RS17200	0.84	-1.0
3,781,647	-		LRK53_RS17200	0.84	-0.2
3,781,647	-		LRK53_RS17200	0.84	-0.5
3,781,647	-		LRK53_RS17200	0.84	-2.3
3,781,682	+		LRK53_RS17200	0.87	-1.0
3,781,682	+		LRK53_RS17200	0.87	+0.4
3,781,682	+		LRK53_RS17200	0.87	+1.4
3,781,682	+		LRK53_RS17200	0.87	-0.0
3,781,682	+		LRK53_RS17200	0.87	-3.0
3,781,682	+		LRK53_RS17200	0.87	-0.4
3,781,682	+		LRK53_RS17200	0.87	+0.4
3,781,682	+		LRK53_RS17200	0.87	+0.4
3,781,682	+		LRK53_RS17200	0.87	-1.2
3,781,682	+		LRK53_RS17200	0.87	-0.0
3,781,682	+		LRK53_RS17200	0.87	+0.4
3,781,682	+		LRK53_RS17200	0.87	+0.4
3,781,682	+		LRK53_RS17200	0.87	-2.3
3,781,682	+		LRK53_RS17200	0.87	-0.7
3,781,682	+		LRK53_RS17200	0.87	+0.6
3,781,682	+		LRK53_RS17200	0.87	-0.1
3,781,682	+		LRK53_RS17200	0.87	-0.1
3,781,682	+		LRK53_RS17200	0.87	-0.3
3,781,682	+		LRK53_RS17200	0.87	+2.7
3,781,683	-		LRK53_RS17200	0.87	-0.3
3,781,683	-		LRK53_RS17200	0.87	-1.4
3,781,683	-		LRK53_RS17200	0.87	-1.4
3,781,683	-		LRK53_RS17200	0.87	-1.7
3,781,683	-		LRK53_RS17200	0.87	-0.4
3,781,683	-		LRK53_RS17200	0.87	-0.2
3,781,683	-		LRK53_RS17200	0.87	-1.0
3,781,683	-		LRK53_RS17200	0.87	+0.4
3,781,683	-		LRK53_RS17200	0.87	-0.9
3,781,683	-		LRK53_RS17200	0.87	+1.4
3,781,683	-		LRK53_RS17200	0.87	-2.3
3,781,683	-		LRK53_RS17200	0.87	+1.4
3,781,683	-		LRK53_RS17200	0.87	-0.5
3,781,683	-		LRK53_RS17200	0.87	-0.2
3,781,683	-		LRK53_RS17200	0.87	-0.2
3,781,683	-		LRK53_RS17200	0.87	-0.6
3,781,683	-		LRK53_RS17200	0.87	-1.1
3,781,784	+				-0.6
3,781,793	+				-0.2
3,781,794	-				+0.5
3,781,794	-				-0.8
3,781,794	-				+1.1
3,781,815	-				-1.1
3,781,815	-				-1.2
3,781,973	-				+1.4
3,782,559	+		LRK53_RS17205	0.60	+1.4
3,782,560	-		LRK53_RS17205	0.61	-1.0
3,782,560	-		LRK53_RS17205	0.61	-1.4
3,782,598	-		LRK53_RS17205	0.64	-0.6
3,782,608	+		LRK53_RS17205	0.65	-0.7
3,782,608	+		LRK53_RS17205	0.65	-1.8
3,782,608	+		LRK53_RS17205	0.65	+0.8
3,782,608	+		LRK53_RS17205	0.65	-0.1
3,782,608	+		LRK53_RS17205	0.65	+1.4
3,782,608	+		LRK53_RS17205	0.65	+0.5
3,782,608	+		LRK53_RS17205	0.65	-1.1
3,782,608	+		LRK53_RS17205	0.65	+0.8
3,782,609	-		LRK53_RS17205	0.66	+0.8
3,782,609	-		LRK53_RS17205	0.66	-1.4
3,782,609	-		LRK53_RS17205	0.66	-0.7
3,782,609	-		LRK53_RS17205	0.66	-1.9
3,782,609	-		LRK53_RS17205	0.66	-0.7
3,782,609	-		LRK53_RS17205	0.66	-1.2
3,782,609	-		LRK53_RS17205	0.66	-1.1
3,782,609	-		LRK53_RS17205	0.66	+0.4
3,782,609	-		LRK53_RS17205	0.66	+0.6
3,782,609	-		LRK53_RS17205	0.66	-0.9
3,782,609	-		LRK53_RS17205	0.66	-0.6
3,782,609	-		LRK53_RS17205	0.66	+0.3
3,782,609	-		LRK53_RS17205	0.66	-1.8
3,782,627	-		LRK53_RS17205	0.67	-0.4
3,782,627	-		LRK53_RS17205	0.67	-1.4
3,782,627	-		LRK53_RS17205	0.67	-0.4
3,782,627	-		LRK53_RS17205	0.67	-1.3
3,782,686	+		LRK53_RS17205	0.73	-1.4
3,782,687	-		LRK53_RS17205	0.73	-0.2
3,782,687	-		LRK53_RS17205	0.73	-1.6
3,782,687	-		LRK53_RS17205	0.73	-1.2
3,782,711	-		LRK53_RS17205	0.76	+0.4
3,783,026	+				-0.6
3,783,026	+				-0.6
3,783,026	+				-1.7
3,783,027	-				+1.4
3,783,029	+				-0.6
3,783,029	+				-0.4
3,783,029	+				+1.8
3,783,029	+				-0.5
3,783,029	+				-1.0
3,783,029	+				-1.6
3,783,029	+				+0.4
3,783,029	+				+1.0
3,783,029	+				-0.6
3,783,029	+				+0.4
3,783,029	+				-1.2
3,783,029	+				+2.4
3,783,030	-				-0.2
3,783,030	-				-1.8
3,783,030	-				+1.1
3,783,030	-				+2.0
3,783,245	+		LRK53_RS17210	0.19	-1.2
3,783,245	+		LRK53_RS17210	0.19	+1.4
3,783,245	+		LRK53_RS17210	0.19	+1.6
3,783,245	+		LRK53_RS17210	0.19	-1.2
3,783,246	-		LRK53_RS17210	0.19	-0.0
3,783,246	-		LRK53_RS17210	0.19	+0.1
3,783,464	+		LRK53_RS17210	0.35	-0.1
3,783,464	+		LRK53_RS17210	0.35	+0.8
3,783,464	+		LRK53_RS17210	0.35	-1.2
3,783,464	+		LRK53_RS17210	0.35	+0.4
3,783,464	+		LRK53_RS17210	0.35	-0.8
3,783,464	+		LRK53_RS17210	0.35	+0.0
3,783,465	-		LRK53_RS17210	0.35	+2.0
3,783,465	-		LRK53_RS17210	0.35	+0.4
3,783,465	-		LRK53_RS17210	0.35	-0.2
3,783,465	-		LRK53_RS17210	0.35	-0.5
3,783,465	-		LRK53_RS17210	0.35	-0.6
3,783,465	-		LRK53_RS17210	0.35	-0.2
3,783,470	+		LRK53_RS17210	0.36	+0.5
3,783,470	+		LRK53_RS17210	0.36	-0.4
3,783,470	+		LRK53_RS17210	0.36	-0.4
3,783,470	+		LRK53_RS17210	0.36	-1.9
3,783,470	+		LRK53_RS17210	0.36	+0.4
3,783,470	+		LRK53_RS17210	0.36	-0.4
3,783,470	+		LRK53_RS17210	0.36	-0.4
3,783,470	+		LRK53_RS17210	0.36	-0.2
3,783,471	-		LRK53_RS17210	0.36	+1.1
3,783,471	-		LRK53_RS17210	0.36	-1.6
3,783,471	-		LRK53_RS17210	0.36	-0.1
3,783,471	-		LRK53_RS17210	0.36	-0.1
3,783,471	-		LRK53_RS17210	0.36	+0.1
3,783,471	-		LRK53_RS17210	0.36	-0.4
3,783,471	-		LRK53_RS17210	0.36	-1.1
3,783,471	-		LRK53_RS17210	0.36	+0.4
3,783,471	-		LRK53_RS17210	0.36	+0.4
3,783,471	-		LRK53_RS17210	0.36	-0.1
3,783,479	+		LRK53_RS17210	0.37	-0.8
3,783,479	+		LRK53_RS17210	0.37	+0.4
3,783,479	+		LRK53_RS17210	0.37	+0.5
3,783,479	+		LRK53_RS17210	0.37	-1.0
3,783,479	+		LRK53_RS17210	0.37	+0.1
3,783,479	+		LRK53_RS17210	0.37	-0.6
3,783,479	+		LRK53_RS17210	0.37	-0.3
3,783,479	+		LRK53_RS17210	0.37	-1.0
3,783,479	+		LRK53_RS17210	0.37	-0.3
3,783,479	+		LRK53_RS17210	0.37	-1.2
3,783,479	+		LRK53_RS17210	0.37	-0.2
3,783,479	+		LRK53_RS17210	0.37	+0.6
3,783,479	+		LRK53_RS17210	0.37	-1.6
3,783,480	-		LRK53_RS17210	0.37	-0.4
3,783,480	-		LRK53_RS17210	0.37	-0.6
3,783,480	-		LRK53_RS17210	0.37	+0.9
3,783,480	-		LRK53_RS17210	0.37	+0.4
3,783,480	-		LRK53_RS17210	0.37	-1.4
3,783,480	-		LRK53_RS17210	0.37	+1.4
3,783,480	-		LRK53_RS17210	0.37	-0.3
3,783,480	-		LRK53_RS17210	0.37	+0.8
3,783,480	-		LRK53_RS17210	0.37	-1.1
3,783,480	-		LRK53_RS17210	0.37	+1.4
3,783,480	-		LRK53_RS17210	0.37	-0.5
3,783,480	-		LRK53_RS17210	0.37	+0.8
3,783,692	+		LRK53_RS17210	0.52	-0.2
3,783,692	+		LRK53_RS17210	0.52	+0.0
3,783,692	+		LRK53_RS17210	0.52	+0.6
3,783,693	-		LRK53_RS17210	0.52	-0.2
3,783,936	-		LRK53_RS17210	0.70	+0.4