Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17070

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,749,995	+				-0.8
3,749,996	-				+1.2
3,749,996	-				-0.5
3,749,996	-				+0.5
3,750,075	+				+0.2
3,750,076	+				-0.1
3,750,076	+				+1.6
3,750,076	+				+1.0
3,750,076	+				+1.2
3,750,076	+				-0.8
3,750,077	-				+1.5
3,750,077	-				+1.2
3,750,077	-				+1.2
3,750,077	-				+1.2
3,750,077	-				+1.2
3,750,077	-				-0.8
3,750,077	-				-0.6
3,750,077	-				+0.2
3,750,095	+				+0.8
3,750,095	+				+0.6
3,750,095	+				-0.6
3,750,095	+				+2.8
3,750,095	+				+0.2
3,750,095	+				+0.2
3,750,095	+				-1.2
3,750,095	+				-1.6
3,750,095	+				-0.4
3,750,095	+				-0.9
3,750,095	+				+0.5
3,750,095	+				-1.6
3,750,095	+				-0.1
3,750,095	+				+0.8
3,750,095	+				-0.8
3,750,095	+				-2.1
3,750,096	-				-1.1
3,750,096	-				+0.6
3,750,096	-				+0.2
3,750,096	-				+2.8
3,750,096	-				-1.4
3,750,096	-				-2.4
3,750,096	-				-1.5
3,750,096	-				-0.4
3,750,096	-				+0.4
3,750,096	-				+0.8
3,750,096	-				-0.8
3,750,096	-				-0.2
3,750,096	-				+0.2
3,750,096	-				-1.4
3,750,096	-				+1.2
3,750,096	-				-0.0
3,750,096	-				+0.9
3,750,096	-				-1.6
3,750,096	-				+1.2
3,750,096	-				-1.5
3,750,096	-				-1.6
3,750,096	-				+0.2
3,750,096	-				+1.6
3,750,097	+				+1.2
3,750,097	+				-0.4
3,750,097	+				+0.2
3,750,097	+				+0.5
3,750,097	+				-1.1
3,750,097	+				-1.0
3,750,097	+				-0.0
3,750,097	+				-1.1
3,750,097	+				+0.2
3,750,097	+				-1.1
3,750,097	+				-2.5
3,750,097	+				+0.7
3,750,097	+				+0.5
3,750,097	+				+0.2
3,750,097	+				-0.2
3,750,097	+				-2.1
3,750,097	+				+0.4
3,750,097	+				+0.5
3,750,097	+				-0.3
3,750,097	+				+1.2
3,750,097	+				+2.2
3,750,097	+				+0.5
3,750,097	+				-0.4
3,750,097	+				-3.1
3,750,097	+				-0.6
3,750,097	+				-0.2
3,750,097	+				+0.5
3,750,097	+				-1.2
3,750,097	+				-1.4
3,750,097	+				-0.4
3,750,097	+				+0.6
3,750,097	+				-0.2
3,750,097	+				-2.1
3,750,097	+				-0.0
3,750,097	+				-0.7
3,750,097	+				-1.2
3,750,097	+				+0.9
3,750,097	+				-0.7
3,750,097	+				+1.2
3,750,097	+				-2.0
3,750,097	+				-0.8
3,750,097	+				-1.0
3,750,097	+				-1.0
3,750,097	+				-0.9
3,750,097	+				+0.7
3,750,097	+				+0.2
3,750,098	-				-2.0
3,750,098	-				+0.5
3,750,098	-				-1.3
3,750,098	-				-1.5
3,750,098	-				+1.2
3,750,098	-				+0.7
3,750,098	-				-0.4
3,750,098	-				-1.4
3,750,098	-				-0.8
3,750,098	-				+0.5
3,750,098	-				-0.6
3,750,098	-				+0.2
3,750,098	-				-1.4
3,750,098	-				+1.8
3,750,098	-				-3.1
3,750,098	-				-0.8
3,750,098	-				-1.6
3,750,098	-				+0.6
3,750,098	-				-0.4
3,750,098	-				-0.6
3,750,098	-				-0.3
3,750,098	-				-0.4
3,750,098	-				+0.4
3,750,098	-				+0.6
3,750,098	-				-0.1
3,750,098	-				-0.5
3,750,098	-				+0.8
3,750,098	-				-0.6
3,750,098	-				-0.3
3,750,098	-				+0.6
3,750,098	-				+0.4
3,750,098	-				-0.1
3,750,098	-				+1.2
3,750,098	-				-1.0
3,750,098	-				+1.2
3,750,098	-				-0.1
3,750,098	-				-0.1
3,750,098	-				+1.2
3,750,098	-				+0.5
3,750,098	-				-0.4
3,750,098	-				-0.8
3,750,098	-				-1.4
3,750,098	-				-0.7
3,750,098	-				-2.5
3,750,098	-				-1.1
3,750,098	-				+1.2
3,750,098	-				-1.1
3,750,098	-				-0.7
3,750,098	-				-0.1
3,750,098	-				-0.4
3,750,098	-				-0.3
3,750,098	-				-1.1
3,750,098	-				+0.2
3,750,098	-				-1.7
3,750,098	-				-1.4
3,750,098	-				-1.3
3,750,098	-				-1.0
3,750,098	-				-0.3
3,750,098	-				+1.2
3,750,098	-				-0.8
3,750,098	-				-0.0
3,750,098	-				+0.5
3,750,098	-				+1.5
3,750,098	-				+1.9
3,750,098	-				+0.2
3,750,098	-				+1.2
3,750,130	+				+0.7
3,750,131	-				-2.4
3,750,131	-				-0.5
3,750,131	-				-1.7
3,750,131	-				-0.4
3,750,363	+		LRK53_RS17065	0.21	-0.3
3,750,363	+		LRK53_RS17065	0.21	-0.2
3,750,364	-		LRK53_RS17065	0.22	-0.4
3,750,364	-		LRK53_RS17065	0.22	-0.5
3,750,364	-		LRK53_RS17065	0.22	+1.2
3,750,364	-		LRK53_RS17065	0.22	+0.2
3,750,441	+		LRK53_RS17065	0.32	+0.0
3,750,441	+		LRK53_RS17065	0.32	-0.1
3,750,441	+		LRK53_RS17065	0.32	-0.4
3,750,441	+		LRK53_RS17065	0.32	-0.5
3,750,442	-		LRK53_RS17065	0.32	-0.6
3,750,442	-		LRK53_RS17065	0.32	-0.2
3,750,442	-		LRK53_RS17065	0.32	-2.0
3,750,442	-		LRK53_RS17065	0.32	+0.3
3,750,442	-		LRK53_RS17065	0.32	+1.2
3,750,468	+		LRK53_RS17065	0.35	-0.1
3,750,468	+		LRK53_RS17065	0.35	-1.1
3,750,468	+		LRK53_RS17065	0.35	-1.1
3,750,468	+		LRK53_RS17065	0.35	-0.4
3,750,468	+		LRK53_RS17065	0.35	-1.1
3,750,468	+		LRK53_RS17065	0.35	-0.1
3,750,468	+		LRK53_RS17065	0.35	+0.2
3,750,468	+		LRK53_RS17065	0.35	+1.2
3,750,468	+		LRK53_RS17065	0.35	-2.7
3,750,469	-		LRK53_RS17065	0.35	+0.2
3,750,469	-		LRK53_RS17065	0.35	+0.2
3,750,927	+				-0.1
3,750,927	+				-1.1
3,750,927	+				-0.4
3,750,927	+				-0.6
3,750,927	+				-1.2
3,750,927	+				-0.1
3,750,928	-				-0.4
3,751,250	+				+1.0
3,751,251	-				+0.2
3,751,251	-				+1.2
3,751,251	-				-1.4
3,751,259	+				+0.8
3,751,259	+				-0.7
3,751,259	+				-0.3
3,751,259	+				-2.0
3,751,259	+				+0.2
3,751,259	+				+1.1
3,751,259	+				-2.0
3,751,259	+				-0.3
3,751,259	+				-0.0
3,751,259	+				-0.5
3,751,259	+				+0.1
3,751,259	+				+1.2
3,751,259	+				+0.5
3,751,259	+				-0.9
3,751,259	+				+1.1
3,751,259	+				+0.8
3,751,259	+				+0.5
3,751,259	+				-0.7
3,751,259	+				-0.4
3,751,259	+				-1.0
3,751,259	+				-1.8
3,751,259	+				-0.4
3,751,259	+				-0.5
3,751,259	+				-0.3
3,751,259	+				-0.4
3,751,259	+				-1.1
3,751,259	+				+1.2
3,751,259	+				+0.2
3,751,259	+				-1.4
3,751,259	+				-0.3
3,751,259	+				-0.4
3,751,259	+				-0.3
3,751,259	+				+0.2
3,751,260	-				+1.2
3,751,260	-				-2.0
3,751,260	-				-1.6
3,751,260	-				-1.2
3,751,260	-				-2.4
3,751,260	-				-0.2
3,751,260	-				+0.3
3,751,260	-				-0.7
3,751,260	-				-0.8
3,751,260	-				-1.0
3,751,260	-				-0.8
3,751,260	-				-0.2
3,751,260	-				+0.9
3,751,260	-				-0.4
3,751,260	-				+1.2
3,751,260	-				+0.9
3,751,260	-				+0.8
3,751,260	-				-2.6
3,751,260	-				-0.5
3,751,260	-				-0.9
3,751,421	+		LRK53_RS17070	0.14	+0.7
3,751,421	+		LRK53_RS17070	0.14	-0.2
3,751,421	+		LRK53_RS17070	0.14	-2.5
3,751,421	+		LRK53_RS17070	0.14	-2.0
3,751,421	+		LRK53_RS17070	0.14	-0.5
3,751,422	-		LRK53_RS17070	0.14	-0.1
3,751,422	-		LRK53_RS17070	0.14	-2.2
3,751,422	-		LRK53_RS17070	0.14	-2.2
3,751,422	-		LRK53_RS17070	0.14	+0.2
3,751,422	-		LRK53_RS17070	0.14	-0.4
3,751,499	+		LRK53_RS17070	0.17	-0.7
3,751,499	+		LRK53_RS17070	0.17	-0.7
3,751,499	+		LRK53_RS17070	0.17	+0.9
3,751,499	+		LRK53_RS17070	0.17	+0.2
3,751,499	+		LRK53_RS17070	0.17	-0.6
3,751,499	+		LRK53_RS17070	0.17	-0.8
3,751,499	+		LRK53_RS17070	0.17	+0.8
3,751,499	+		LRK53_RS17070	0.17	-1.6
3,751,499	+		LRK53_RS17070	0.17	+1.2
3,751,500	-		LRK53_RS17070	0.17	+0.2
3,751,500	-		LRK53_RS17070	0.17	-1.7
3,751,500	-		LRK53_RS17070	0.17	+0.1
3,751,500	-		LRK53_RS17070	0.17	-1.3
3,751,500	-		LRK53_RS17070	0.17	-1.4
3,751,500	-		LRK53_RS17070	0.17	-1.1
3,751,500	-		LRK53_RS17070	0.17	-1.2
3,751,508	+		LRK53_RS17070	0.17	-1.1
3,751,508	+		LRK53_RS17070	0.17	-0.2
3,751,509	-		LRK53_RS17070	0.17	+0.3
3,751,509	-		LRK53_RS17070	0.17	-0.4
3,751,509	-		LRK53_RS17070	0.17	-0.1
3,751,509	-		LRK53_RS17070	0.17	+1.2
3,751,509	-		LRK53_RS17070	0.17	+1.2
3,751,509	-		LRK53_RS17070	0.17	-0.8
3,751,532	+		LRK53_RS17070	0.18	-0.9
3,751,631	+		LRK53_RS17070	0.21	-0.9
3,751,631	+		LRK53_RS17070	0.21	-0.5
3,751,631	+		LRK53_RS17070	0.21	-2.0
3,751,631	+		LRK53_RS17070	0.21	-1.4
3,751,652	+		LRK53_RS17070	0.22	+0.1
3,752,108	+		LRK53_RS17070	0.36	+1.2
3,752,108	+		LRK53_RS17070	0.36	+1.2
3,752,108	+		LRK53_RS17070	0.36	+1.1
3,752,108	+		LRK53_RS17070	0.36	+0.2
3,752,109	-		LRK53_RS17070	0.36	+0.6
3,752,109	-		LRK53_RS17070	0.36	+1.2
3,752,181	-		LRK53_RS17070	0.39	-2.0
3,752,201	+		LRK53_RS17070	0.39	+0.3
3,752,219	+		LRK53_RS17070	0.40	-1.4
3,752,219	+		LRK53_RS17070	0.40	+1.2
3,752,219	+		LRK53_RS17070	0.40	-0.8
3,752,219	+		LRK53_RS17070	0.40	+2.2
3,752,219	+		LRK53_RS17070	0.40	-0.7
3,752,220	-		LRK53_RS17070	0.40	+0.4
3,752,220	-		LRK53_RS17070	0.40	+1.7
3,752,220	-		LRK53_RS17070	0.40	+1.2
3,752,220	-		LRK53_RS17070	0.40	+1.2
3,752,220	-		LRK53_RS17070	0.40	-0.4
3,752,220	-		LRK53_RS17070	0.40	+0.7
3,752,220	-		LRK53_RS17070	0.40	+0.6
3,752,366	+		LRK53_RS17070	0.44	-1.1
3,752,366	+		LRK53_RS17070	0.44	+0.0
3,752,366	+		LRK53_RS17070	0.44	+0.4
3,752,525	+		LRK53_RS17070	0.50	-1.3
3,752,525	+		LRK53_RS17070	0.50	-1.9
3,752,526	-		LRK53_RS17070	0.50	+0.2
3,752,526	-		LRK53_RS17070	0.50	+1.2
3,752,702	+		LRK53_RS17070	0.55	-1.0
3,752,702	+		LRK53_RS17070	0.55	-1.0
3,752,702	+		LRK53_RS17070	0.55	-0.5
3,752,702	+		LRK53_RS17070	0.55	+0.5
3,752,702	+		LRK53_RS17070	0.55	+1.8
3,752,702	+		LRK53_RS17070	0.55	+1.2
3,752,702	+		LRK53_RS17070	0.55	-1.0
3,752,702	+		LRK53_RS17070	0.55	-0.7
3,752,702	+		LRK53_RS17070	0.55	-1.4
3,752,702	+		LRK53_RS17070	0.55	+1.8
3,752,702	+		LRK53_RS17070	0.55	+0.6
3,752,703	-		LRK53_RS17070	0.55	-1.0
3,752,703	-		LRK53_RS17070	0.55	-0.8
3,752,703	-		LRK53_RS17070	0.55	+0.7
3,752,703	-		LRK53_RS17070	0.55	-0.4
3,752,703	-		LRK53_RS17070	0.55	-1.4
3,752,703	-		LRK53_RS17070	0.55	+0.6
3,752,703	-		LRK53_RS17070	0.55	+0.6
3,752,703	-		LRK53_RS17070	0.55	+0.2
3,752,703	-		LRK53_RS17070	0.55	-1.1
3,752,703	-		LRK53_RS17070	0.55	+0.5
3,752,742	-		LRK53_RS17070	0.57	+0.9
3,752,986	-		LRK53_RS17070	0.64	-0.7
3,752,996	+		LRK53_RS17070	0.65	+0.2
3,752,996	+		LRK53_RS17070	0.65	-1.0
3,752,996	+		LRK53_RS17070	0.65	+0.2
3,752,997	-		LRK53_RS17070	0.65	+2.2
3,752,997	-		LRK53_RS17070	0.65	+1.5
3,752,997	-		LRK53_RS17070	0.65	+0.2
3,753,095	+		LRK53_RS17070	0.68	-0.1
3,753,096	-		LRK53_RS17070	0.68	+0.8
3,753,380	+		LRK53_RS17070	0.77	-2.6
3,753,380	+		LRK53_RS17070	0.77	+2.2
3,753,380	+		LRK53_RS17070	0.77	+1.2
3,753,380	+		LRK53_RS17070	0.77	+0.5
3,753,381	-		LRK53_RS17070	0.77	+0.4
3,753,381	-		LRK53_RS17070	0.77	+0.2
3,753,381	-		LRK53_RS17070	0.77	-1.6
3,753,381	-		LRK53_RS17070	0.77	+0.7
3,753,381	-		LRK53_RS17070	0.77	+1.2
3,753,381	-		LRK53_RS17070	0.77	-1.1
3,753,381	-		LRK53_RS17070	0.77	+0.7
3,753,381	-		LRK53_RS17070	0.77	+0.2
3,753,383	+		LRK53_RS17070	0.77	-1.1
3,753,383	+		LRK53_RS17070	0.77	+0.4
3,753,383	+		LRK53_RS17070	0.77	-0.9
3,753,383	+		LRK53_RS17070	0.77	+0.2
3,753,384	-		LRK53_RS17070	0.77	-0.4
3,753,384	-		LRK53_RS17070	0.77	-0.4
3,753,384	-		LRK53_RS17070	0.77	+1.2
3,753,384	-		LRK53_RS17070	0.77	-0.4
3,753,384	-		LRK53_RS17070	0.77	-1.3
3,753,384	-		LRK53_RS17070	0.77	-1.6
3,753,384	-		LRK53_RS17070	0.77	-1.4
3,753,384	-		LRK53_RS17070	0.77	-0.1
3,753,384	-		LRK53_RS17070	0.77	+1.2
3,753,404	+		LRK53_RS17070	0.78	+0.2
3,753,509	+		LRK53_RS17070	0.81	-0.5
3,753,509	+		LRK53_RS17070	0.81	-1.6
3,753,510	-		LRK53_RS17070	0.81	+0.2
3,753,638	+		LRK53_RS17070	0.85	-2.2
3,753,638	+		LRK53_RS17070	0.85	+0.3
3,753,638	+		LRK53_RS17070	0.85	-1.1
3,753,639	-		LRK53_RS17070	0.85	-1.6
3,753,639	-		LRK53_RS17070	0.85	+1.2
3,753,644	+		LRK53_RS17070	0.85	+0.2
3,753,644	+		LRK53_RS17070	0.85	+1.8
3,753,644	+		LRK53_RS17070	0.85	-2.0
3,753,645	-		LRK53_RS17070	0.85	-2.0
3,753,645	-		LRK53_RS17070	0.85	+0.0
3,753,645	-		LRK53_RS17070	0.85	-0.4
3,753,645	-		LRK53_RS17070	0.85	+0.8
3,753,645	-		LRK53_RS17070	0.85	+1.2
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3,753,645	-		LRK53_RS17070	0.85	-0.2
3,753,645	-		LRK53_RS17070	0.85	+1.1
3,753,746	+		LRK53_RS17070	0.89	-1.1
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3,753,794	+				+0.2
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3,753,795	-				-0.8
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3,754,343	-		LRK53_RS17075	0.22	-2.1
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3,754,800	+		LRK53_RS17075	0.63	-0.2
3,754,879	+		LRK53_RS17075	0.70	+0.9