Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16905

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,710,662	-		LRK53_RS16895	0.45	+0.9
3,710,662	-		LRK53_RS16895	0.45	-0.6
3,710,697	+		LRK53_RS16895	0.53	-0.2
3,710,697	+		LRK53_RS16895	0.53	-3.5
3,710,697	+		LRK53_RS16895	0.53	+1.2
3,710,697	+		LRK53_RS16895	0.53	-1.5
3,710,697	+		LRK53_RS16895	0.53	+0.3
3,710,697	+		LRK53_RS16895	0.53	-0.1
3,710,697	+		LRK53_RS16895	0.53	-1.2
3,710,697	+		LRK53_RS16895	0.53	-0.3
3,710,697	+		LRK53_RS16895	0.53	+0.2
3,710,697	+		LRK53_RS16895	0.53	-2.1
3,710,697	+		LRK53_RS16895	0.53	-1.0
3,710,698	-		LRK53_RS16895	0.53	+2.1
3,710,698	-		LRK53_RS16895	0.53	-2.0
3,710,698	-		LRK53_RS16895	0.53	+0.2
3,710,698	-		LRK53_RS16895	0.53	-0.6
3,710,698	-		LRK53_RS16895	0.53	+0.9
3,710,698	-		LRK53_RS16895	0.53	-2.4
3,710,698	-		LRK53_RS16895	0.53	-2.2
3,710,698	-		LRK53_RS16895	0.53	-0.5
3,710,698	-		LRK53_RS16895	0.53	+1.2
3,710,698	-		LRK53_RS16895	0.53	+0.5
3,710,698	-		LRK53_RS16895	0.53	+0.1
3,710,698	-		LRK53_RS16895	0.53	+0.5
3,710,698	-		LRK53_RS16895	0.53	-1.2
3,710,698	-		LRK53_RS16895	0.53	-0.9
3,710,698	-		LRK53_RS16895	0.53	+1.2
3,710,883	+				-1.6
3,710,883	+				-1.0
3,710,883	+				-0.1
3,710,883	+				+1.5
3,710,883	+				+0.3
3,710,883	+				-0.1
3,710,883	+				-0.3
3,710,883	+				+0.4
3,710,883	+				+0.3
3,710,883	+				-2.2
3,710,883	+				+0.5
3,710,883	+				-0.4
3,710,883	+				-0.2
3,710,883	+				+1.2
3,710,883	+				+0.0
3,710,883	+				+0.5
3,710,883	+				-0.8
3,710,883	+				-0.5
3,710,883	+				-1.6
3,710,883	+				+2.2
3,710,883	+				+0.3
3,710,883	+				+1.2
3,710,883	+				-1.1
3,710,884	-				+1.2
3,710,884	-				-1.1
3,710,884	-				+1.2
3,710,884	-				-0.1
3,710,884	-				+1.2
3,710,884	-				-0.4
3,710,884	-				+2.2
3,710,884	-				-2.0
3,710,884	-				-0.6
3,710,884	-				+1.2
3,710,884	-				-1.4
3,710,884	-				-1.2
3,710,884	-				-0.4
3,710,884	-				+1.2
3,710,884	-				-1.8
3,710,884	-				+0.2
3,710,884	-				-0.7
3,710,884	-				-0.4
3,710,884	-				-1.0
3,710,884	-				-0.2
3,710,884	-				-1.6
3,710,884	-				-1.8
3,710,884	-				-0.8
3,710,884	-				-0.2
3,710,884	-				-0.8
3,710,884	-				+1.2
3,710,884	-				+1.7
3,710,884	-				+2.5
3,710,884	-				-0.1
3,710,884	-				-1.2
3,710,884	-				-0.3
3,710,884	-				+0.9
3,710,884	-				+1.2
3,710,884	-				-0.8
3,710,987	-				-2.2
3,711,172	+		LRK53_RS16900	0.36	-0.6
3,711,172	+		LRK53_RS16900	0.36	-1.6
3,711,172	+		LRK53_RS16900	0.36	+1.2
3,711,172	+		LRK53_RS16900	0.36	+0.2
3,711,172	+		LRK53_RS16900	0.36	-1.4
3,711,202	+		LRK53_RS16900	0.41	-0.4
3,711,202	+		LRK53_RS16900	0.41	-1.6
3,711,202	+		LRK53_RS16900	0.41	-1.4
3,711,202	+		LRK53_RS16900	0.41	-0.4
3,711,203	-		LRK53_RS16900	0.41	-1.2
3,711,203	-		LRK53_RS16900	0.41	+0.7
3,711,203	-		LRK53_RS16900	0.41	-0.2
3,711,203	-		LRK53_RS16900	0.41	-1.4
3,711,203	-		LRK53_RS16900	0.41	-0.9
3,711,654	+				-1.0
3,711,933	+		LRK53_RS16905	0.16	+1.2
3,711,933	+		LRK53_RS16905	0.16	-1.2
3,711,933	+		LRK53_RS16905	0.16	+0.6
3,711,933	+		LRK53_RS16905	0.16	-0.5
3,711,933	+		LRK53_RS16905	0.16	-0.1
3,711,933	+		LRK53_RS16905	0.16	+0.4
3,711,933	+		LRK53_RS16905	0.16	+0.2
3,711,934	-		LRK53_RS16905	0.16	+0.2
3,711,934	-		LRK53_RS16905	0.16	-0.5
3,711,934	-		LRK53_RS16905	0.16	+0.8
3,711,934	-		LRK53_RS16905	0.16	+0.2
3,711,934	-		LRK53_RS16905	0.16	+0.2
3,711,934	-		LRK53_RS16905	0.16	-0.1
3,711,934	-		LRK53_RS16905	0.16	-0.9
3,711,934	-		LRK53_RS16905	0.16	-0.4
3,711,978	+		LRK53_RS16905	0.18	-0.4
3,711,978	+		LRK53_RS16905	0.18	+1.2
3,711,978	+		LRK53_RS16905	0.18	-0.4
3,711,978	+		LRK53_RS16905	0.18	-1.8
3,711,978	+		LRK53_RS16905	0.18	-1.8
3,711,978	+		LRK53_RS16905	0.18	+0.6
3,711,978	+		LRK53_RS16905	0.18	-0.5
3,711,978	+		LRK53_RS16905	0.18	-0.6
3,711,979	-		LRK53_RS16905	0.18	-1.2
3,711,979	-		LRK53_RS16905	0.18	-0.3
3,712,134	+		LRK53_RS16905	0.26	-1.8
3,712,135	-		LRK53_RS16905	0.26	+1.2
3,712,227	+		LRK53_RS16905	0.31	+1.2
3,712,227	+		LRK53_RS16905	0.31	-0.8
3,712,227	+		LRK53_RS16905	0.31	+1.8
3,712,228	-		LRK53_RS16905	0.31	-0.6
3,712,228	-		LRK53_RS16905	0.31	+0.1
3,712,363	+		LRK53_RS16905	0.38	+0.6
3,712,363	+		LRK53_RS16905	0.38	+0.6
3,712,363	+		LRK53_RS16905	0.38	-0.3
3,712,363	+		LRK53_RS16905	0.38	+0.9
3,712,363	+		LRK53_RS16905	0.38	-1.0
3,712,364	-		LRK53_RS16905	0.38	-0.0
3,712,364	-		LRK53_RS16905	0.38	-0.5
3,712,364	-		LRK53_RS16905	0.38	-2.8
3,712,364	-		LRK53_RS16905	0.38	+0.2
3,712,364	-		LRK53_RS16905	0.38	+1.5
3,712,364	-		LRK53_RS16905	0.38	+0.8
3,712,364	-		LRK53_RS16905	0.38	+0.2
3,712,364	-		LRK53_RS16905	0.38	-1.2
3,712,364	-		LRK53_RS16905	0.38	+0.5
3,712,575	+		LRK53_RS16905	0.48	+1.5
3,712,576	-		LRK53_RS16905	0.48	-0.2
3,712,692	+		LRK53_RS16905	0.54	-1.4
3,712,692	+		LRK53_RS16905	0.54	-1.1
3,712,692	+		LRK53_RS16905	0.54	-1.4
3,712,692	+		LRK53_RS16905	0.54	+0.5
3,712,692	+		LRK53_RS16905	0.54	+0.4
3,712,692	+		LRK53_RS16905	0.54	+0.6
3,712,692	+		LRK53_RS16905	0.54	-0.4
3,712,693	-		LRK53_RS16905	0.54	-0.6
3,712,693	-		LRK53_RS16905	0.54	+0.4
3,712,693	-		LRK53_RS16905	0.54	-0.5
3,712,693	-		LRK53_RS16905	0.54	-0.5
3,712,693	-		LRK53_RS16905	0.54	+1.2
3,712,693	-		LRK53_RS16905	0.54	-1.2
3,712,693	-		LRK53_RS16905	0.54	-1.1
3,712,693	-		LRK53_RS16905	0.54	+1.2
3,712,693	-		LRK53_RS16905	0.54	-0.8
3,712,722	+		LRK53_RS16905	0.56	-0.3
3,712,722	+		LRK53_RS16905	0.56	-0.9
3,712,722	+		LRK53_RS16905	0.56	-1.1
3,712,722	+		LRK53_RS16905	0.56	-1.1
3,712,723	-		LRK53_RS16905	0.56	-0.6
3,712,723	-		LRK53_RS16905	0.56	-0.8
3,712,723	-		LRK53_RS16905	0.56	+1.6
3,712,723	-		LRK53_RS16905	0.56	-0.2
3,712,723	-		LRK53_RS16905	0.56	+1.2
3,712,799	+		LRK53_RS16905	0.60	-0.3
3,712,799	+		LRK53_RS16905	0.60	-2.2
3,712,800	-		LRK53_RS16905	0.60	-2.1
3,712,815	+		LRK53_RS16905	0.60	-0.8
3,712,815	+		LRK53_RS16905	0.60	+1.1
3,712,815	+		LRK53_RS16905	0.60	+1.2
3,712,815	+		LRK53_RS16905	0.60	-0.8
3,712,815	+		LRK53_RS16905	0.60	-1.1
3,712,815	+		LRK53_RS16905	0.60	-2.6
3,712,816	-		LRK53_RS16905	0.61	-0.2
3,712,816	-		LRK53_RS16905	0.61	-0.8
3,713,294	+		LRK53_RS16905	0.85	-0.8
3,713,294	+		LRK53_RS16905	0.85	+0.2
3,713,294	+		LRK53_RS16905	0.85	-0.1
3,713,294	+		LRK53_RS16905	0.85	-0.4
3,713,295	-		LRK53_RS16905	0.85	-0.9
3,713,295	-		LRK53_RS16905	0.85	+0.2
3,713,295	-		LRK53_RS16905	0.85	+0.2
3,713,295	-		LRK53_RS16905	0.85	-0.3
3,713,295	-		LRK53_RS16905	0.85	+1.2
3,713,295	-		LRK53_RS16905	0.85	+0.6
3,713,295	-		LRK53_RS16905	0.85	+1.2
3,713,295	-		LRK53_RS16905	0.85	+0.3
3,713,295	-		LRK53_RS16905	0.85	+0.7
3,713,346	+		LRK53_RS16905	0.87	+1.2
3,713,346	+		LRK53_RS16905	0.87	+0.9
3,713,347	-		LRK53_RS16905	0.87	-1.2
3,713,347	-		LRK53_RS16905	0.87	+0.9
3,713,347	-		LRK53_RS16905	0.87	+0.2
3,713,347	-		LRK53_RS16905	0.87	-0.1
3,713,347	-		LRK53_RS16905	0.87	-0.4
3,713,398	+				+1.9
3,713,398	+				-0.1
3,713,398	+				+0.2
3,713,398	+				-0.5
3,713,399	-				-2.3
3,713,399	-				+0.2
3,713,399	-				-1.4
3,713,400	+				+0.2
3,713,400	+				-2.6
3,713,400	+				-1.2
3,713,400	+				+2.2
3,713,400	+				-1.7
3,713,400	+				+0.0
3,713,400	+				-1.8
3,713,400	+				+0.6
3,713,400	+				-1.0
3,713,400	+				-0.3
3,713,400	+				+0.2
3,713,400	+				+0.6
3,713,400	+				-2.8
3,713,401	-				-1.1
3,713,401	-				-0.6
3,713,401	-				-0.2
3,713,401	-				-0.4
3,713,401	-				-1.8
3,713,401	-				-1.4
3,713,401	-				-1.4
3,713,401	-				+0.3
3,713,401	-				-1.1
3,713,401	-				-0.2
3,713,401	-				-0.3
3,713,401	-				-1.2
3,713,401	-				-0.5
3,713,401	-				-1.4
3,713,401	-				-2.1
3,713,401	-				-0.6
3,713,401	-				+0.2
3,713,401	-				-1.0
3,713,401	-				-0.4
3,713,543	+				-1.2
3,713,544	-				-0.2
3,713,624	-				+1.2
3,713,641	-				+1.5