Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16720

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,678,602	+				-1.4
3,678,602	+				+0.0
3,678,602	+				-0.8
3,678,602	+				-0.4
3,678,602	+				+1.0
3,678,602	+				-0.2
3,678,602	+				-0.1
3,678,602	+				-0.2
3,678,602	+				+0.3
3,678,602	+				+1.4
3,678,602	+				-0.4
3,678,603	-				-0.2
3,678,603	-				+1.4
3,678,603	-				-0.1
3,678,603	-				+3.0
3,678,607	+				+0.5
3,678,607	+				-1.1
3,678,607	+				+0.2
3,678,621	+				-0.6
3,678,621	+				+0.1
3,678,622	-				+0.9
3,678,622	-				+0.4
3,678,622	-				-0.1
3,678,670	+				-0.5
3,678,670	+				-1.5
3,678,670	+				-1.0
3,678,670	+				-0.2
3,678,670	+				-0.2
3,678,670	+				+0.8
3,678,670	+				+0.4
3,678,671	-				-0.2
3,678,671	-				-1.2
3,678,671	-				-0.2
3,678,671	-				-0.6
3,678,671	-				-0.6
3,678,671	-				+1.2
3,678,671	-				+2.0
3,678,671	-				+0.6
3,678,671	-				+1.4
3,678,671	-				-0.2
3,678,671	-				-0.1
3,678,671	-				-1.6
3,678,744	+				+0.0
3,678,744	+				+0.6
3,678,744	+				-0.2
3,678,744	+				-0.2
3,678,745	-				+0.0
3,678,745	-				-0.0
3,678,745	-				-0.2
3,678,745	-				-0.1
3,678,745	-				-1.5
3,678,745	-				-1.0
3,678,745	-				+0.1
3,679,186	+		LRK53_RS16715	0.55	+0.8
3,679,186	+		LRK53_RS16715	0.55	-0.6
3,679,186	+		LRK53_RS16715	0.55	-2.2
3,679,186	+		LRK53_RS16715	0.55	-0.4
3,679,186	+		LRK53_RS16715	0.55	+0.0
3,679,186	+		LRK53_RS16715	0.55	-0.1
3,679,186	+		LRK53_RS16715	0.55	-0.7
3,679,187	-		LRK53_RS16715	0.55	-1.4
3,679,187	-		LRK53_RS16715	0.55	-0.5
3,679,187	-		LRK53_RS16715	0.55	-0.2
3,679,187	-		LRK53_RS16715	0.55	-2.0
3,679,187	-		LRK53_RS16715	0.55	-1.1
3,679,187	-		LRK53_RS16715	0.55	-0.4
3,679,187	-		LRK53_RS16715	0.55	-0.4
3,679,187	-		LRK53_RS16715	0.55	+1.4
3,679,187	-		LRK53_RS16715	0.55	-0.6
3,679,187	-		LRK53_RS16715	0.55	+1.4
3,679,187	-		LRK53_RS16715	0.55	-0.2
3,679,216	+		LRK53_RS16715	0.59	-2.0
3,679,216	+		LRK53_RS16715	0.59	-0.0
3,679,216	+		LRK53_RS16715	0.59	+0.5
3,679,216	+		LRK53_RS16715	0.59	-0.2
3,679,216	+		LRK53_RS16715	0.59	-1.3
3,679,216	+		LRK53_RS16715	0.59	-1.2
3,679,216	+		LRK53_RS16715	0.59	-1.4
3,679,217	-		LRK53_RS16715	0.60	+0.4
3,679,217	-		LRK53_RS16715	0.60	-0.0
3,679,217	-		LRK53_RS16715	0.60	-0.9
3,679,217	-		LRK53_RS16715	0.60	+0.5
3,679,267	+		LRK53_RS16715	0.67	-1.6
3,679,267	+		LRK53_RS16715	0.67	+0.4
3,679,267	+		LRK53_RS16715	0.67	+0.1
3,679,268	-		LRK53_RS16715	0.67	+1.4
3,679,582	+				-2.5
3,679,582	+				+1.4
3,679,582	+				+0.8
3,679,582	+				-1.7
3,679,582	+				-0.2
3,679,582	+				+0.4
3,679,582	+				-0.6
3,679,582	+				-1.8
3,679,582	+				-2.0
3,679,582	+				-0.2
3,679,582	+				+1.4
3,679,582	+				-2.4
3,679,582	+				-1.0
3,679,582	+				-3.5
3,679,582	+				-1.5
3,679,582	+				-0.6
3,679,582	+				-1.2
3,679,582	+				-2.7
3,679,582	+				-1.5
3,679,582	+				+2.4
3,679,582	+				-0.2
3,679,582	+				-0.2
3,679,582	+				-1.4
3,679,582	+				-1.1
3,679,582	+				-0.4
3,679,582	+				-1.4
3,679,582	+				-0.1
3,679,582	+				-1.3
3,679,582	+				+2.4
3,679,582	+				-1.4
3,679,582	+				-1.8
3,679,582	+				-0.7
3,679,582	+				-1.9
3,679,582	+				-2.3
3,679,582	+				+0.0
3,679,582	+				-1.5
3,679,583	-				-0.8
3,679,583	-				-0.2
3,679,583	-				+0.4
3,679,583	-				-1.5
3,679,583	-				+0.7
3,679,583	-				-0.4
3,679,583	-				-0.6
3,679,583	-				-2.4
3,679,583	-				-1.0
3,679,583	-				-1.0
3,679,583	-				-1.6
3,679,583	-				-1.0
3,679,583	-				-1.2
3,679,583	-				+1.6
3,679,583	-				+0.4
3,679,583	-				+0.4
3,679,583	-				-2.5
3,679,583	-				-1.1
3,679,583	-				-2.1
3,679,583	-				-1.1
3,679,583	-				+2.4
3,679,583	-				-3.4
3,679,583	-				-1.8
3,679,583	-				-0.8
3,679,583	-				-2.8
3,679,583	-				+3.0
3,679,583	-				-2.0
3,679,583	-				-0.1
3,679,583	-				-0.5
3,679,583	-				-0.8
3,679,583	-				+0.0
3,679,583	-				-1.0
3,679,583	-				-0.4
3,679,583	-				+1.0
3,679,583	-				-3.2
3,679,583	-				+0.4
3,679,583	-				-2.1
3,679,583	-				-1.2
3,679,583	-				-0.2
3,679,583	-				+1.4
3,679,583	-				-2.0
3,679,583	-				-1.3
3,679,583	-				-3.8
3,679,583	-				-1.0
3,679,583	-				-1.8
3,679,583	-				-0.8
3,679,604	+				-1.7
3,679,604	+				+0.4
3,679,606	+				-2.0
3,679,606	+				-1.2
3,679,606	+				-1.2
3,679,606	+				+0.0
3,679,606	+				+1.7
3,679,606	+				-0.6
3,679,606	+				-1.0
3,679,606	+				+1.4
3,679,606	+				-3.0
3,679,606	+				+0.8
3,679,606	+				-0.2
3,679,606	+				-1.0
3,679,606	+				-0.4
3,679,606	+				-0.9
3,679,606	+				-2.5
3,679,606	+				+0.4
3,679,606	+				-0.7
3,679,606	+				-0.5
3,679,606	+				-1.8
3,679,606	+				-1.2
3,679,606	+				+0.2
3,679,606	+				-1.2
3,679,606	+				-0.8
3,679,606	+				+0.4
3,679,606	+				-1.8
3,679,606	+				-1.3
3,679,606	+				-1.8
3,679,606	+				-0.7
3,679,606	+				-0.6
3,679,606	+				-0.6
3,679,606	+				+0.0
3,679,606	+				-0.1
3,679,606	+				-2.2
3,679,606	+				+0.2
3,679,606	+				-1.0
3,679,606	+				+0.4
3,679,606	+				+0.4
3,679,607	-				-2.0
3,679,607	-				+0.9
3,679,607	-				-0.6
3,679,607	-				-1.3
3,679,607	-				-0.1
3,679,607	-				+0.6
3,679,607	-				-2.0
3,679,607	-				-1.4
3,679,607	-				-0.9
3,679,607	-				-2.2
3,679,607	-				-2.3
3,679,607	-				+0.2
3,679,607	-				-2.7
3,679,607	-				+0.0
3,679,607	-				-3.2
3,679,607	-				-1.4
3,679,607	-				-1.4
3,679,607	-				-0.8
3,679,607	-				-1.6
3,679,607	-				-0.8
3,679,607	-				-1.2
3,679,607	-				-1.6
3,679,607	-				-2.1
3,679,607	-				-0.2
3,679,607	-				+1.4
3,679,607	-				+0.2
3,679,607	-				-1.0
3,679,607	-				+0.6
3,679,607	-				-0.5
3,679,607	-				-1.4
3,679,607	-				+0.7
3,679,607	-				-0.2
3,679,738	+		LRK53_RS16720	0.14	+0.2
3,679,738	+		LRK53_RS16720	0.14	-0.6
3,679,738	+		LRK53_RS16720	0.14	+0.0
3,679,738	+		LRK53_RS16720	0.14	-0.2
3,679,738	+		LRK53_RS16720	0.14	-0.6
3,679,738	+		LRK53_RS16720	0.14	-0.5
3,679,738	+		LRK53_RS16720	0.14	-1.4
3,679,738	+		LRK53_RS16720	0.14	-0.7
3,679,738	+		LRK53_RS16720	0.14	-1.2
3,679,738	+		LRK53_RS16720	0.14	-0.2
3,679,738	+		LRK53_RS16720	0.14	-1.3
3,679,738	+		LRK53_RS16720	0.14	-1.1
3,679,738	+		LRK53_RS16720	0.14	-1.0
3,679,738	+		LRK53_RS16720	0.14	+0.0
3,679,738	+		LRK53_RS16720	0.14	-1.7
3,679,738	+		LRK53_RS16720	0.14	-0.3
3,679,738	+		LRK53_RS16720	0.14	-1.2
3,679,738	+		LRK53_RS16720	0.14	-0.6
3,679,738	+		LRK53_RS16720	0.14	+0.4
3,679,738	+		LRK53_RS16720	0.14	+0.0
3,679,738	+		LRK53_RS16720	0.14	+0.1
3,679,738	+		LRK53_RS16720	0.14	-0.6
3,679,738	+		LRK53_RS16720	0.14	-1.9
3,679,738	+		LRK53_RS16720	0.14	-1.4
3,679,738	+		LRK53_RS16720	0.14	-2.3
3,679,738	+		LRK53_RS16720	0.14	+1.4
3,679,738	+		LRK53_RS16720	0.14	-4.1
3,679,738	+		LRK53_RS16720	0.14	-2.0
3,679,738	+		LRK53_RS16720	0.14	-2.5
3,679,738	+		LRK53_RS16720	0.14	-1.4
3,679,738	+		LRK53_RS16720	0.14	-0.2
3,679,738	+		LRK53_RS16720	0.14	-1.9
3,679,738	+		LRK53_RS16720	0.14	+3.0
3,679,738	+		LRK53_RS16720	0.14	-1.8
3,679,738	+		LRK53_RS16720	0.14	+1.4
3,679,738	+		LRK53_RS16720	0.14	-1.9
3,679,738	+		LRK53_RS16720	0.14	-1.0
3,679,739	-		LRK53_RS16720	0.14	-0.2
3,679,739	-		LRK53_RS16720	0.14	-1.8
3,679,739	-		LRK53_RS16720	0.14	+0.4
3,679,739	-		LRK53_RS16720	0.14	-0.6
3,679,739	-		LRK53_RS16720	0.14	-1.0
3,679,739	-		LRK53_RS16720	0.14	-1.2
3,679,739	-		LRK53_RS16720	0.14	-1.9
3,679,739	-		LRK53_RS16720	0.14	-1.4
3,679,739	-		LRK53_RS16720	0.14	-1.2
3,679,739	-		LRK53_RS16720	0.14	+0.0
3,679,739	-		LRK53_RS16720	0.14	-0.9
3,679,739	-		LRK53_RS16720	0.14	-2.3
3,679,739	-		LRK53_RS16720	0.14	-0.2
3,679,739	-		LRK53_RS16720	0.14	+1.4
3,679,739	-		LRK53_RS16720	0.14	-3.4
3,679,739	-		LRK53_RS16720	0.14	-0.6
3,679,739	-		LRK53_RS16720	0.14	-1.4
3,679,739	-		LRK53_RS16720	0.14	-1.3
3,679,739	-		LRK53_RS16720	0.14	-1.4
3,679,739	-		LRK53_RS16720	0.14	-1.1
3,679,739	-		LRK53_RS16720	0.14	+1.4
3,679,739	-		LRK53_RS16720	0.14	+0.1
3,679,739	-		LRK53_RS16720	0.14	-0.8
3,679,739	-		LRK53_RS16720	0.14	-1.0
3,679,739	-		LRK53_RS16720	0.14	-1.2
3,679,739	-		LRK53_RS16720	0.14	-0.6
3,679,739	-		LRK53_RS16720	0.14	-0.7
3,679,739	-		LRK53_RS16720	0.14	-1.8
3,679,739	-		LRK53_RS16720	0.14	-1.4
3,679,739	-		LRK53_RS16720	0.14	-0.5
3,679,739	-		LRK53_RS16720	0.14	-0.5
3,679,739	-		LRK53_RS16720	0.14	-2.0
3,679,739	-		LRK53_RS16720	0.14	-0.6
3,679,739	-		LRK53_RS16720	0.14	-2.8
3,679,739	-		LRK53_RS16720	0.14	+0.8
3,679,739	-		LRK53_RS16720	0.14	+0.8
3,679,739	-		LRK53_RS16720	0.14	+0.4
3,679,739	-		LRK53_RS16720	0.14	+0.2
3,679,739	-		LRK53_RS16720	0.14	-0.6
3,679,739	-		LRK53_RS16720	0.14	-0.4
3,679,739	-		LRK53_RS16720	0.14	-1.6
3,679,753	+		LRK53_RS16720	0.15	-2.8
3,679,753	+		LRK53_RS16720	0.15	-1.6
3,679,753	+		LRK53_RS16720	0.15	+0.4
3,679,753	+		LRK53_RS16720	0.15	-0.5
3,679,754	-		LRK53_RS16720	0.15	-0.2
3,679,754	-		LRK53_RS16720	0.15	-1.8
3,679,754	-		LRK53_RS16720	0.15	+2.0
3,679,754	-		LRK53_RS16720	0.15	-2.4
3,679,754	-		LRK53_RS16720	0.15	-1.4
3,679,754	-		LRK53_RS16720	0.15	-1.3
3,679,754	-		LRK53_RS16720	0.15	-0.0
3,679,754	-		LRK53_RS16720	0.15	-0.3
3,679,754	-		LRK53_RS16720	0.15	-1.2
3,679,771	+		LRK53_RS16720	0.16	-0.1
3,679,771	+		LRK53_RS16720	0.16	+0.0
3,679,772	-		LRK53_RS16720	0.16	-1.2
3,679,772	-		LRK53_RS16720	0.16	+0.0
3,679,792	+		LRK53_RS16720	0.18	-0.2
3,679,792	+		LRK53_RS16720	0.18	+0.0
3,679,792	+		LRK53_RS16720	0.18	-0.9
3,679,792	+		LRK53_RS16720	0.18	-0.8
3,679,792	+		LRK53_RS16720	0.18	-1.0
3,679,792	+		LRK53_RS16720	0.18	-0.3
3,679,792	+		LRK53_RS16720	0.18	-0.6
3,679,792	+		LRK53_RS16720	0.18	-2.3
3,679,792	+		LRK53_RS16720	0.18	-1.4
3,679,792	+		LRK53_RS16720	0.18	-0.6
3,679,792	+		LRK53_RS16720	0.18	+1.4
3,679,792	+		LRK53_RS16720	0.18	-1.4
3,679,792	+		LRK53_RS16720	0.18	+1.0
3,679,792	+		LRK53_RS16720	0.18	-0.5
3,679,792	+		LRK53_RS16720	0.18	-0.0
3,679,792	+		LRK53_RS16720	0.18	-3.2
3,679,792	+		LRK53_RS16720	0.18	+1.0
3,679,793	-		LRK53_RS16720	0.18	-1.6
3,679,793	-		LRK53_RS16720	0.18	-2.4
3,679,793	-		LRK53_RS16720	0.18	-0.6
3,679,793	-		LRK53_RS16720	0.18	-2.2
3,679,793	-		LRK53_RS16720	0.18	-2.6
3,679,793	-		LRK53_RS16720	0.18	-0.2
3,679,793	-		LRK53_RS16720	0.18	-1.2
3,679,793	-		LRK53_RS16720	0.18	-1.3
3,679,793	-		LRK53_RS16720	0.18	+0.4
3,679,793	-		LRK53_RS16720	0.18	+0.4
3,679,793	-		LRK53_RS16720	0.18	+0.1
3,679,793	-		LRK53_RS16720	0.18	-0.9
3,679,793	-		LRK53_RS16720	0.18	-1.1
3,679,793	-		LRK53_RS16720	0.18	+0.0
3,679,793	-		LRK53_RS16720	0.18	-0.1
3,679,793	-		LRK53_RS16720	0.18	+0.4
3,679,793	-		LRK53_RS16720	0.18	-1.3
3,679,793	-		LRK53_RS16720	0.18	-1.7
3,679,793	-		LRK53_RS16720	0.18	-0.9
3,679,793	-		LRK53_RS16720	0.18	+0.1
3,679,793	-		LRK53_RS16720	0.18	+1.4
3,679,793	-		LRK53_RS16720	0.18	-2.1
3,679,793	-		LRK53_RS16720	0.18	-0.7
3,679,921	+		LRK53_RS16720	0.28	-0.6
3,679,921	+		LRK53_RS16720	0.28	+2.0
3,679,921	+		LRK53_RS16720	0.28	+0.1
3,679,921	+		LRK53_RS16720	0.28	-0.5
3,679,921	+		LRK53_RS16720	0.28	-0.5
3,679,921	+		LRK53_RS16720	0.28	+1.4
3,679,921	+		LRK53_RS16720	0.28	+0.4
3,679,921	+		LRK53_RS16720	0.28	-1.1
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